RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 PTPRAP18433 802 aa25.81■■□□□ 1.72
UBE2D3-229ENST00000510129 DGKZQ13574 1117 aa25.81■■□□□ 1.72
UBE2D3-229ENST00000510129 PKN2Q16513 984 aaKnown RBP25.81■■□□□ 1.72
UBE2D3-229ENST00000510129 ZFYVE28Q9HCC9 887 aa25.81■■□□□ 1.72
UBE2D3-229ENST00000510129 DOCK1Q14185 1865 aa25.81■■□□□ 1.72
UBE2D3-229ENST00000510129 CDK5RAP2Q96SN8 1893 aa25.81■■□□□ 1.72
UBE2D3-229ENST00000510129 DYNLL1P63167 89 aaKnown RBP25.8■■□□□ 1.72
UBE2D3-229ENST00000510129 CRACR2BQ8N4Y2 399 aaPredicted RBP25.8■■□□□ 1.72
UBE2D3-229ENST00000510129 CRNKL1Q9BZJ0 848 aaKnown RBP25.8■■□□□ 1.72
UBE2D3-229ENST00000510129 GINM1Q9NU53 330 aa25.8■■□□□ 1.72
UBE2D3-229ENST00000510129 TTC41PQ6P2S7 1318 aa25.8■■□□□ 1.72
UBE2D3-229ENST00000510129 ZNF532Q9HCE3 1301 aa25.8■■□□□ 1.72
UBE2D3-229ENST00000510129 ERC2O15083 957 aa25.79■■□□□ 1.72
UBE2D3-229ENST00000510129 CRHR2Q13324 411 aa25.79■■□□□ 1.72
UBE2D3-229ENST00000510129 TAF1CQ15572 869 aaPredicted RBP25.79■■□□□ 1.72
UBE2D3-229ENST00000510129 FASTKD5Q7L8L6 764 aaKnown RBP25.79■■□□□ 1.72
UBE2D3-229ENST00000510129 TTC6Q86TZ1 520 aa25.79■■□□□ 1.72
UBE2D3-229ENST00000510129 METTL16Q86W50 562 aaKnown RBP25.79■■□□□ 1.72
UBE2D3-229ENST00000510129 RIOK1Q9BRS2 568 aaKnown RBP25.79■■□□□ 1.72
UBE2D3-229ENST00000510129 ZHX2Q9Y6X8 837 aa25.79■■□□□ 1.72
UBE2D3-229ENST00000510129 UBE3CQ15386 1083 aa25.78■■□□□ 1.72
UBE2D3-229ENST00000510129 LRRFIP1Q32MZ4 808 aaKnown RBP25.78■■□□□ 1.72
UBE2D3-229ENST00000510129 ANKRD23Q86SG2 305 aa25.78■■□□□ 1.72
UBE2D3-229ENST00000510129 ABHD8Q96I13 439 aa25.78■■□□□ 1.72
UBE2D3-229ENST00000510129 MCOLN1Q9GZU1 580 aa25.78■■□□□ 1.72
UBE2D3-229ENST00000510129 ADD2P35612 726 aa25.77■■□□□ 1.72
UBE2D3-229ENST00000510129 CAP2P40123 477 aa25.77■■□□□ 1.72
UBE2D3-229ENST00000510129 ERO1AQ96HE7 468 aa25.77■■□□□ 1.72
UBE2D3-229ENST00000510129 EHD4Q9H223 541 aa25.77■■□□□ 1.72
UBE2D3-229ENST00000510129 TAOK2Q9UL54 1235 aa25.77■■□□□ 1.72
UBE2D3-229ENST00000510129 PALD1Q9ULE6 856 aa25.77■■□□□ 1.72
UBE2D3-229ENST00000510129 TCRBV5S4A2TA0A5A2 114 aa25.76■■□□□ 1.71
UBE2D3-229ENST00000510129 BTBD19C9JJ37 291 aa25.76■■□□□ 1.71
UBE2D3-229ENST00000510129 ARHGEF6Q15052 776 aa25.76■■□□□ 1.71
UBE2D3-229ENST00000510129 FAM43AQ8N2R8 423 aa25.76■■□□□ 1.71
UBE2D3-229ENST00000510129 RWDD1Q9H446 243 aaPredicted RBP25.76■■□□□ 1.71
UBE2D3-229ENST00000510129 AFG3L2Q9Y4W6 797 aa25.76■■□□□ 1.71
UBE2D3-229ENST00000510129 EDC3Q96F86 508 aaKnown RBP25.75■■□□□ 1.71
UBE2D3-229ENST00000510129 AS3MTQ9HBK9 375 aa25.75■■□□□ 1.71
UBE2D3-229ENST00000510129 A0A0G2JLL6 359 aaPredicted RBP25.74■■□□□ 1.71
UBE2D3-229ENST00000510129 ASNSP08243 561 aa25.74■■□□□ 1.71
UBE2D3-229ENST00000510129 PRRT2Q7Z6L0 340 aaPredicted RBP25.74■■□□□ 1.71
UBE2D3-229ENST00000510129 DDRGK1Q96HY6 314 aa25.74■■□□□ 1.71
UBE2D3-229ENST00000510129 R3HDMLQ9H3Y0 253 aa25.74■■□□□ 1.71
UBE2D3-229ENST00000510129 SAP30BPQ9UHR5 308 aaKnown RBP25.74■■□□□ 1.71
UBE2D3-229ENST00000510129 SERPINB13Q9UIV8 391 aa25.74■■□□□ 1.71
UBE2D3-229ENST00000510129 MYH1P12882 1939 aa25.73■■□□□ 1.71
UBE2D3-229ENST00000510129 FAM196BA6NMK8 535 aa25.73■■□□□ 1.71
UBE2D3-229ENST00000510129 TLR2O60603 784 aa25.73■■□□□ 1.71
UBE2D3-229ENST00000510129 GLRX3O76003 335 aaKnown RBP25.73■■□□□ 1.71
UBE2D3-229ENST00000510129 ZFYP08048 801 aaPredicted RBP25.73■■□□□ 1.71
UBE2D3-229ENST00000510129 SP3Q02447 781 aa25.73■■□□□ 1.71
UBE2D3-229ENST00000510129 KBTBD3Q8NAB2 608 aa25.73■■□□□ 1.71
UBE2D3-229ENST00000510129 SLC45A1Q9Y2W3 748 aa25.73■■□□□ 1.71
UBE2D3-229ENST00000510129 MYH7P12883 1935 aa25.73■■□□□ 1.71
UBE2D3-229ENST00000510129 USP17L5A8MUK1 530 aa25.72■■□□□ 1.71
UBE2D3-229ENST00000510129 MX1P20591 662 aa25.72■■□□□ 1.71
UBE2D3-229ENST00000510129 PARK7Q99497 189 aaKnown RBP25.72■■□□□ 1.71
UBE2D3-229ENST00000510129 ATP8A2Q9NTI2 1148 aa25.72■■□□□ 1.71
UBE2D3-229ENST00000510129 PDHXO00330 501 aa25.71■■□□□ 1.71
UBE2D3-229ENST00000510129 POLR3DP05423 398 aaPredicted RBP25.71■■□□□ 1.71
UBE2D3-229ENST00000510129 ANKRD45Q5TZF3 282 aa25.71■■□□□ 1.71
UBE2D3-229ENST00000510129 AMOTL1Q8IY63 956 aa25.71■■□□□ 1.71
UBE2D3-229ENST00000510129 ZNF280CQ8ND82 737 aa25.71■■□□□ 1.71
UBE2D3-229ENST00000510129 SUPT16HQ9Y5B9 1047 aaKnown RBP25.71■■□□□ 1.71
UBE2D3-229ENST00000510129 SIPA1L1O43166 1804 aa25.71■■□□□ 1.71
UBE2D3-229ENST00000510129 ATAD5Q96QE3 1844 aa25.7■■□□□ 1.71
UBE2D3-229ENST00000510129 TRIM75PA6NK02 468 aa25.7■■□□□ 1.7
UBE2D3-229ENST00000510129 LCORLQ8N3X6 602 aa25.7■■□□□ 1.7
UBE2D3-229ENST00000510129 CAPN15O75808 1086 aa25.69■■□□□ 1.7
UBE2D3-229ENST00000510129 MBD4O95243 580 aa25.69■■□□□ 1.7
UBE2D3-229ENST00000510129 SLURP2P0DP57 97 aa25.69■■□□□ 1.7
UBE2D3-229ENST00000510129 KIF22Q14807 665 aa25.69■■□□□ 1.7
UBE2D3-229ENST00000510129 PROCA1Q8NCQ7 364 aaPredicted RBP25.69■■□□□ 1.7
UBE2D3-229ENST00000510129 WDR18Q9BV38 432 aa25.69■■□□□ 1.7
UBE2D3-229ENST00000510129 DNAJC18Q9H819 358 aa25.69■■□□□ 1.7
UBE2D3-229ENST00000510129 MCM9Q9NXL9 1143 aa25.69■■□□□ 1.7
UBE2D3-229ENST00000510129 PHIPQ8WWQ0 1821 aa25.69■■□□□ 1.7
UBE2D3-229ENST00000510129 NAV1Q8NEY1 1877 aa25.68■■□□□ 1.7
UBE2D3-229ENST00000510129 MOGSQ13724 837 aa25.68■■□□□ 1.7
UBE2D3-229ENST00000510129 TATDN1Q6P1N9 297 aa25.68■■□□□ 1.7
UBE2D3-229ENST00000510129 FBXO46Q6PJ61 603 aaPredicted RBP25.68■■□□□ 1.7
UBE2D3-229ENST00000510129 DCP1AQ9NPI6 582 aaPredicted RBP25.68■■□□□ 1.7
UBE2D3-229ENST00000510129 DDX60LQ5H9U9 1706 aaKnown RBP25.68■■□□□ 1.7
UBE2D3-229ENST00000510129 SPP2Q13103 211 aa25.67■■□□□ 1.7
UBE2D3-229ENST00000510129 PABPC4Q13310 644 aaKnown RBP eCLIP25.67■■□□□ 1.74e-7■■■■□ 24.1
UBE2D3-229ENST00000510129 GADL1Q6ZQY3 521 aa25.67■■□□□ 1.7
UBE2D3-229ENST00000510129 ARMT1Q9H993 441 aa25.67■■□□□ 1.7
UBE2D3-229ENST00000510129 PNMA3Q9UL41 463 aa25.67■■□□□ 1.7
UBE2D3-229ENST00000510129 RNF113AO15541 343 aaKnown RBP25.66■■□□□ 1.7
UBE2D3-229ENST00000510129 GNRH1P01148 92 aa25.66■■□□□ 1.7
UBE2D3-229ENST00000510129 SMC5Q8IY18 1101 aa25.66■■□□□ 1.7
UBE2D3-229ENST00000510129 EXOC6Q8TAG9 804 aa25.66■■□□□ 1.7
UBE2D3-229ENST00000510129 PI4K2BQ8TCG2 481 aa25.66■■□□□ 1.7
UBE2D3-229ENST00000510129 APPBP2Q92624 585 aa25.66■■□□□ 1.7
UBE2D3-229ENST00000510129 AGTPBP1Q9UPW5 1226 aa25.66■■□□□ 1.7
UBE2D3-229ENST00000510129 C19orf81C9J6K1 198 aa25.65■■□□□ 1.7
UBE2D3-229ENST00000510129 TSHZ3Q63HK5 1081 aa25.65■■□□□ 1.7
UBE2D3-229ENST00000510129 GPAT2Q6NUI2 795 aa25.65■■□□□ 1.7
UBE2D3-229ENST00000510129 SDR42E1Q8WUS8 393 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms