RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 IFNL1Q8IU54 200 aa16.44■□□□□ 0.22
SNF8-206ENST00000509989 MYH8P13535 1937 aa16.43■□□□□ 0.22
SNF8-206ENST00000509989 PLCG2P16885 1265 aa16.43■□□□□ 0.22
SNF8-206ENST00000509989 USP5P45974 858 aa16.43■□□□□ 0.22
SNF8-206ENST00000509989 NOL9Q5SY16 702 aaKnown RBP16.43■□□□□ 0.22
SNF8-206ENST00000509989 ERO1BQ86YB8 467 aa16.43■□□□□ 0.22
SNF8-206ENST00000509989 SEC62Q99442 399 aaKnown RBP16.43■□□□□ 0.22
SNF8-206ENST00000509989 RWDD1Q9H446 243 aaPredicted RBP16.43■□□□□ 0.22
SNF8-206ENST00000509989 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.43■□□□□ 0.22
SNF8-206ENST00000509989 TTC41PQ6P2S7 1318 aa16.43■□□□□ 0.22
SNF8-206ENST00000509989 CYP2D7A0A087X1C5 515 aa16.42■□□□□ 0.22
SNF8-206ENST00000509989 TESPA1A2RU30 521 aaPredicted RBP16.42■□□□□ 0.22
SNF8-206ENST00000509989 MANSC4A6NHS7 340 aaPredicted RBP16.42■□□□□ 0.22
SNF8-206ENST00000509989 PLCD1P51178 756 aa16.42■□□□□ 0.22
SNF8-206ENST00000509989 PDE1AP54750 535 aa16.42■□□□□ 0.22
SNF8-206ENST00000509989 CAP1Q01518 475 aa16.42■□□□□ 0.22
SNF8-206ENST00000509989 DGKZQ13574 1117 aa16.42■□□□□ 0.22
SNF8-206ENST00000509989 MOGSQ13724 837 aa16.42■□□□□ 0.22
SNF8-206ENST00000509989 SCYL3Q8IZE3 742 aa16.42■□□□□ 0.22
SNF8-206ENST00000509989 FAM43AQ8N2R8 423 aa16.42■□□□□ 0.22
SNF8-206ENST00000509989 KBTBD3Q8NAB2 608 aa16.42■□□□□ 0.22
SNF8-206ENST00000509989 OSBP2Q969R2 916 aa16.42■□□□□ 0.22
SNF8-206ENST00000509989 HOOK2Q96ED9 719 aa16.42■□□□□ 0.22
SNF8-206ENST00000509989 PRDM10Q9NQV6 1147 aa16.42■□□□□ 0.22
SNF8-206ENST00000509989 CCL15-CCL14A0A0B4J2E2 113 aa16.41■□□□□ 0.22
SNF8-206ENST00000509989 M0R2C6 588 aa16.41■□□□□ 0.22
SNF8-206ENST00000509989 TBC1D12O60347 775 aa16.41■□□□□ 0.22
SNF8-206ENST00000509989 PTPRAP18433 802 aa16.41■□□□□ 0.22
SNF8-206ENST00000509989 PDE4AP27815 886 aa16.41■□□□□ 0.22
SNF8-206ENST00000509989 NUCB1Q02818 461 aa16.41■□□□□ 0.22
SNF8-206ENST00000509989 PPIL2Q13356 520 aa16.41■□□□□ 0.22
SNF8-206ENST00000509989 AAMPQ13685 434 aa16.41■□□□□ 0.22
SNF8-206ENST00000509989 UBE3CQ15386 1083 aa16.41■□□□□ 0.22
SNF8-206ENST00000509989 CCL15Q16663 113 aa16.41■□□□□ 0.22
SNF8-206ENST00000509989 SAGE1Q9NXZ1 904 aa16.41■□□□□ 0.22
SNF8-206ENST00000509989 STAP2Q9UGK3 403 aa16.41■□□□□ 0.22
SNF8-206ENST00000509989 IGSF3O75054 1194 aa16.4■□□□□ 0.22
SNF8-206ENST00000509989 GDF11O95390 407 aa16.4■□□□□ 0.22
SNF8-206ENST00000509989 PPATQ06203 517 aa16.4■□□□□ 0.22
SNF8-206ENST00000509989 SREBF2Q12772 1141 aa16.4■□□□□ 0.22
SNF8-206ENST00000509989 METTL16Q86W50 562 aaKnown RBP16.4■□□□□ 0.22
SNF8-206ENST00000509989 CHD1LQ86WJ1 897 aa16.4■□□□□ 0.22
SNF8-206ENST00000509989 GPATCH3Q96I76 525 aa16.4■□□□□ 0.22
SNF8-206ENST00000509989 DCP1AQ9NPI6 582 aaPredicted RBP16.4■□□□□ 0.22
SNF8-206ENST00000509989 PI4KBQ9UBF8 816 aa16.4■□□□□ 0.22
SNF8-206ENST00000509989 ZHX2Q9Y6X8 837 aa16.4■□□□□ 0.22
SNF8-206ENST00000509989 BTBD19C9JJ37 291 aa16.39■□□□□ 0.21
SNF8-206ENST00000509989 CA12O43570 354 aa16.39■□□□□ 0.21
SNF8-206ENST00000509989 GLRX3O76003 335 aaKnown RBP16.39■□□□□ 0.21
SNF8-206ENST00000509989 PLEKHM2Q8IWE5 1019 aa16.39■□□□□ 0.21
SNF8-206ENST00000509989 SLC44A5Q8NCS7 719 aa16.39■□□□□ 0.21
SNF8-206ENST00000509989 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.39■□□□□ 0.21
SNF8-206ENST00000509989 KCNH4Q9UQ05 1017 aa16.39■□□□□ 0.21
SNF8-206ENST00000509989 RNF113AO15541 343 aaKnown RBP16.38■□□□□ 0.21
SNF8-206ENST00000509989 CTNND1O60716 968 aaKnown RBP16.38■□□□□ 0.21
SNF8-206ENST00000509989 CAP2P40123 477 aa16.38■□□□□ 0.21
SNF8-206ENST00000509989 GTF2A2P52657 109 aa16.38■□□□□ 0.21
SNF8-206ENST00000509989 CRHR2Q13324 411 aa16.38■□□□□ 0.21
SNF8-206ENST00000509989 SKAP1Q86WV1 359 aa16.38■□□□□ 0.21
SNF8-206ENST00000509989 REM2Q8IYK8 340 aaPredicted RBP16.38■□□□□ 0.21
SNF8-206ENST00000509989 DYNLL2Q96FJ2 89 aa16.38■□□□□ 0.21
SNF8-206ENST00000509989 CRNKL1Q9BZJ0 848 aaKnown RBP16.38■□□□□ 0.21
SNF8-206ENST00000509989 DHX36Q9H2U1 1008 aaKnown RBP16.38■□□□□ 0.21
SNF8-206ENST00000509989 AFG3L2Q9Y4W6 797 aa16.38■□□□□ 0.21
SNF8-206ENST00000509989 LOC285556D6RIA3 1793 aa16.38■□□□□ 0.21
SNF8-206ENST00000509989 SHMT1P34896 483 aa16.37■□□□□ 0.21
SNF8-206ENST00000509989 GPAT2Q6NUI2 795 aa16.37■□□□□ 0.21
SNF8-206ENST00000509989 CCDC129Q6ZRS4 1044 aa16.37■□□□□ 0.21
SNF8-206ENST00000509989 FOXP4Q8IVH2 680 aaPredicted RBP16.37■□□□□ 0.21
SNF8-206ENST00000509989 TNS4Q8IZW8 715 aa16.37■□□□□ 0.21
SNF8-206ENST00000509989 CRACR2BQ8N4Y2 399 aaPredicted RBP16.37■□□□□ 0.21
SNF8-206ENST00000509989 ZNF296Q8WUU4 475 aaPredicted RBP16.37■□□□□ 0.21
SNF8-206ENST00000509989 STRBPQ96SI9 672 aaKnown RBP16.37■□□□□ 0.21
SNF8-206ENST00000509989 MCM9Q9NXL9 1143 aa16.37■□□□□ 0.21
SNF8-206ENST00000509989 HERC5Q9UII4 1024 aaKnown RBP16.37■□□□□ 0.21
SNF8-206ENST00000509989 SLC4A4Q9Y6R1 1079 aa16.37■□□□□ 0.21
SNF8-206ENST00000509989 TRIM75PA6NK02 468 aa16.36■□□□□ 0.21
SNF8-206ENST00000509989 GPR25O00155 361 aa16.36■□□□□ 0.21
SNF8-206ENST00000509989 ERC2O15083 957 aa16.36■□□□□ 0.21
SNF8-206ENST00000509989 SNAPC2Q13487 334 aa16.36■□□□□ 0.21
SNF8-206ENST00000509989 FSD1Q9BTV5 496 aa16.36■□□□□ 0.21
SNF8-206ENST00000509989 EPB41L4AQ9HCS5 686 aaPredicted RBP16.36■□□□□ 0.21
SNF8-206ENST00000509989 GSG1L2A8MUP6 293 aa16.35■□□□□ 0.21
SNF8-206ENST00000509989 FOXP2O15409 715 aa16.35■□□□□ 0.21
SNF8-206ENST00000509989 POLR3DP05423 398 aaPredicted RBP16.35■□□□□ 0.21
SNF8-206ENST00000509989 CETPP11597 493 aa16.35■□□□□ 0.21
SNF8-206ENST00000509989 INHBEP58166 350 aa16.35■□□□□ 0.21
SNF8-206ENST00000509989 GABPAQ06546 454 aa16.35■□□□□ 0.21
SNF8-206ENST00000509989 TMED8Q6PL24 325 aaPredicted RBP16.35■□□□□ 0.21
SNF8-206ENST00000509989 APPBP2Q92624 585 aa16.35■□□□□ 0.21
SNF8-206ENST00000509989 PICK1Q9NRD5 415 aa16.35■□□□□ 0.21
SNF8-206ENST00000509989 ZBTB47Q9UFB7 747 aaPredicted RBP16.35■□□□□ 0.21
SNF8-206ENST00000509989 USP17L12C9JPN9 530 aa16.34■□□□□ 0.21
SNF8-206ENST00000509989 USP17L21D6R901 530 aa16.34■□□□□ 0.21
SNF8-206ENST00000509989 GPAA1O43292 621 aa16.34■□□□□ 0.21
SNF8-206ENST00000509989 ECM2O94769 699 aaPredicted RBP16.34■□□□□ 0.21
SNF8-206ENST00000509989 HLA-DOAP06340 250 aa16.34■□□□□ 0.21
SNF8-206ENST00000509989 GUCY1A2P33402 732 aa16.34■□□□□ 0.21
SNF8-206ENST00000509989 SPP2Q13103 211 aa16.34■□□□□ 0.21
SNF8-206ENST00000509989 ZMYM1Q5SVZ6 1142 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms