RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 EXOC6Q8TAG9 804 aa29.24■■■□□ 2.27
SRPK1-210ENST00000508473 GPATCH3Q96I76 525 aa29.24■■■□□ 2.27
SRPK1-210ENST00000508473 ZHX2Q9Y6X8 837 aa29.24■■■□□ 2.27
SRPK1-210ENST00000508473 PTPRAP18433 802 aa29.23■■■□□ 2.27
SRPK1-210ENST00000508473 CCDC84Q86UT8 332 aaPredicted RBP29.23■■■□□ 2.27
SRPK1-210ENST00000508473 LAMB1P07942 1786 aa29.23■■■□□ 2.27
SRPK1-210ENST00000508473 BTBD19C9JJ37 291 aa29.22■■■□□ 2.27
SRPK1-210ENST00000508473 CHGBP05060 677 aa29.22■■■□□ 2.27
SRPK1-210ENST00000508473 RRP1BQ14684 758 aaKnown RBP29.22■■■□□ 2.27
SRPK1-210ENST00000508473 OTUD7AQ8TE49 926 aaPredicted RBP29.22■■■□□ 2.27
SRPK1-210ENST00000508473 HERC5Q9UII4 1024 aaKnown RBP29.22■■■□□ 2.27
SRPK1-210ENST00000508473 KCNH4Q9UQ05 1017 aa29.22■■■□□ 2.27
SRPK1-210ENST00000508473 FKTNO75072 461 aa29.21■■■□□ 2.27
SRPK1-210ENST00000508473 ADD2P35612 726 aa29.21■■■□□ 2.27
SRPK1-210ENST00000508473 HDAC1Q13547 482 aaPredicted RBP29.21■■■□□ 2.27
SRPK1-210ENST00000508473 TAF1CQ15572 869 aaPredicted RBP29.21■■■□□ 2.27
SRPK1-210ENST00000508473 NOM1Q5C9Z4 860 aaKnown RBP29.21■■■□□ 2.27
SRPK1-210ENST00000508473 ABHD8Q96I13 439 aa29.21■■■□□ 2.27
SRPK1-210ENST00000508473 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.21■■■□□ 2.274e-7■□□□□ 10.4
SRPK1-210ENST00000508473 ANKRD45Q5TZF3 282 aa29.2■■■□□ 2.26
SRPK1-210ENST00000508473 CRACR2BQ8N4Y2 399 aaPredicted RBP29.2■■■□□ 2.26
SRPK1-210ENST00000508473 TRIM34Q9BYJ4 488 aa29.2■■■□□ 2.26
SRPK1-210ENST00000508473 HLA-DOAP06340 250 aa29.19■■■□□ 2.26
SRPK1-210ENST00000508473 CTU1Q7Z7A3 348 aaKnown RBP29.19■■■□□ 2.26
SRPK1-210ENST00000508473 FOXP4Q8IVH2 680 aaPredicted RBP29.19■■■□□ 2.26
SRPK1-210ENST00000508473 LCORLQ8N3X6 602 aa29.19■■■□□ 2.26
SRPK1-210ENST00000508473 DNAJC18Q9H819 358 aa29.19■■■□□ 2.26
SRPK1-210ENST00000508473 CDK5RAP2Q96SN8 1893 aa29.19■■■□□ 2.26
SRPK1-210ENST00000508473 CXCL11O14625 94 aa29.18■■■□□ 2.26
SRPK1-210ENST00000508473 AAMPQ13685 434 aa29.18■■■□□ 2.26
SRPK1-210ENST00000508473 CRNKL1Q9BZJ0 848 aaKnown RBP29.18■■■□□ 2.26
SRPK1-210ENST00000508473 ARMT1Q9H993 441 aa29.18■■■□□ 2.26
SRPK1-210ENST00000508473 ZFYVE28Q9HCC9 887 aa29.18■■■□□ 2.26
SRPK1-210ENST00000508473 ZBTB47Q9UFB7 747 aaPredicted RBP29.18■■■□□ 2.26
SRPK1-210ENST00000508473 AFG3L2Q9Y4W6 797 aa29.18■■■□□ 2.26
SRPK1-210ENST00000508473 CAP2P40123 477 aa29.17■■■□□ 2.26
SRPK1-210ENST00000508473 GCC1Q96CN9 775 aa29.17■■■□□ 2.26
SRPK1-210ENST00000508473 FOCADQ5VW36 1801 aa29.16■■■□□ 2.26
SRPK1-210ENST00000508473 TRIM75PA6NK02 468 aa29.16■■■□□ 2.26
SRPK1-210ENST00000508473 MBD4O95243 580 aa29.16■■■□□ 2.26
SRPK1-210ENST00000508473 MOGSQ13724 837 aa29.16■■■□□ 2.26
SRPK1-210ENST00000508473 SDR42E1Q8WUS8 393 aa29.16■■■□□ 2.26
SRPK1-210ENST00000508473 UBE3CQ15386 1083 aa29.15■■■□□ 2.26
SRPK1-210ENST00000508473 METTL16Q86W50 562 aaKnown RBP29.15■■■□□ 2.26
SRPK1-210ENST00000508473 SIPA1L1O43166 1804 aa29.15■■■□□ 2.26
SRPK1-210ENST00000508473 DOCK1Q14185 1865 aa29.14■■■□□ 2.26
SRPK1-210ENST00000508473 ZSCAN25Q6NSZ9 544 aa29.14■■■□□ 2.26
SRPK1-210ENST00000508473 ANKRD23Q86SG2 305 aa29.14■■■□□ 2.26
SRPK1-210ENST00000508473 TTC41PQ6P2S7 1318 aa29.14■■■□□ 2.25
SRPK1-210ENST00000508473 PDHXO00330 501 aa29.13■■■□□ 2.25
SRPK1-210ENST00000508473 PRKAB2O43741 272 aa29.13■■■□□ 2.25
SRPK1-210ENST00000508473 GDF11O95390 407 aa29.13■■■□□ 2.25
SRPK1-210ENST00000508473 POLR3DP05423 398 aaPredicted RBP29.13■■■□□ 2.25
SRPK1-210ENST00000508473 MX1P20591 662 aa29.13■■■□□ 2.25
SRPK1-210ENST00000508473 IRX6P78412 446 aaPredicted RBP29.13■■■□□ 2.25
SRPK1-210ENST00000508473 JAG1P78504 1218 aa29.13■■■□□ 2.25
SRPK1-210ENST00000508473 SHROOM1Q2M3G4 852 aaPredicted RBP29.13■■■□□ 2.25
SRPK1-210ENST00000508473 GADL1Q6ZQY3 521 aa29.13■■■□□ 2.25
SRPK1-210ENST00000508473 TTC6Q86TZ1 520 aa29.13■■■□□ 2.25
SRPK1-210ENST00000508473 KBTBD3Q8NAB2 608 aa29.13■■■□□ 2.25
SRPK1-210ENST00000508473 PI4K2BQ8TCG2 481 aa29.13■■■□□ 2.25
SRPK1-210ENST00000508473 ZCCHC17Q9NP64 241 aaKnown RBP29.13■■■□□ 2.25
SRPK1-210ENST00000508473 A0A0G2JLL6 359 aaPredicted RBP29.12■■■□□ 2.25
SRPK1-210ENST00000508473 ERC2O15083 957 aa29.12■■■□□ 2.25
SRPK1-210ENST00000508473 PLCD1P51178 756 aa29.12■■■□□ 2.25
SRPK1-210ENST00000508473 GPAT2Q6NUI2 795 aa29.12■■■□□ 2.25
SRPK1-210ENST00000508473 PRRT2Q7Z6L0 340 aaPredicted RBP29.12■■■□□ 2.25
SRPK1-210ENST00000508473 RWDD1Q9H446 243 aaPredicted RBP29.12■■■□□ 2.25
SRPK1-210ENST00000508473 MCM9Q9NXL9 1143 aa29.12■■■□□ 2.25
SRPK1-210ENST00000508473 SP3Q02447 781 aa29.11■■■□□ 2.25
SRPK1-210ENST00000508473 SPP2Q13103 211 aa29.11■■■□□ 2.25
SRPK1-210ENST00000508473 CD99L2Q8TCZ2 262 aa29.11■■■□□ 2.25
SRPK1-210ENST00000508473 PUS7LQ9H0K6 701 aaKnown RBP29.11■■■□□ 2.25
SRPK1-210ENST00000508473 DCP1AQ9NPI6 582 aaPredicted RBP29.11■■■□□ 2.25
SRPK1-210ENST00000508473 SERPINB13Q9UIV8 391 aa29.11■■■□□ 2.25
SRPK1-210ENST00000508473 MYH1P12882 1939 aa29.1■■■□□ 2.25
SRPK1-210ENST00000508473 CCDC85CA6NKD9 419 aa29.1■■■□□ 2.25
SRPK1-210ENST00000508473 USP17L5A8MUK1 530 aa29.1■■■□□ 2.25
SRPK1-210ENST00000508473 GLRX3O76003 335 aaKnown RBP29.1■■■□□ 2.25
SRPK1-210ENST00000508473 IGHDP01880 384 aa29.1■■■□□ 2.25
SRPK1-210ENST00000508473 EVX2Q03828 476 aa29.1■■■□□ 2.25
SRPK1-210ENST00000508473 FASTKD5Q7L8L6 764 aaKnown RBP29.1■■■□□ 2.25
SRPK1-210ENST00000508473 TLR2O60603 784 aa29.09■■■□□ 2.25
SRPK1-210ENST00000508473 B4GALNT3Q6L9W6 998 aa29.09■■■□□ 2.25
SRPK1-210ENST00000508473 ZNF280CQ8ND82 737 aa29.09■■■□□ 2.25
SRPK1-210ENST00000508473 ERO1AQ96HE7 468 aa29.09■■■□□ 2.25
SRPK1-210ENST00000508473 EHD4Q9H223 541 aa29.09■■■□□ 2.25
SRPK1-210ENST00000508473 ASNSP08243 561 aa29.08■■■□□ 2.25
SRPK1-210ENST00000508473 CYP2D6P10635 497 aa29.08■■■□□ 2.25
SRPK1-210ENST00000508473 TRIM17Q9Y577 477 aa29.08■■■□□ 2.25
SRPK1-210ENST00000508473 SALL3Q9BXA9 1300 aa29.08■■■□□ 2.25
SRPK1-210ENST00000508473 RNF113AO15541 343 aaKnown RBP29.07■■■□□ 2.24
SRPK1-210ENST00000508473 LNPKQ9C0E8 428 aa29.07■■■□□ 2.24
SRPK1-210ENST00000508473 AS3MTQ9HBK9 375 aa29.07■■■□□ 2.24
SRPK1-210ENST00000508473 CPA4Q9UI42 421 aa29.07■■■□□ 2.24
SRPK1-210ENST00000508473 ZBTB21Q9ULJ3 1066 aa29.07■■■□□ 2.24
SRPK1-210ENST00000508473 SLC4A4Q9Y6R1 1079 aa29.07■■■□□ 2.24
SRPK1-210ENST00000508473 CYP2C8P10632 490 aa29.06■■■□□ 2.24
SRPK1-210ENST00000508473 CAP1Q01518 475 aa29.06■■■□□ 2.24
SRPK1-210ENST00000508473 SMC5Q8IY18 1101 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms