RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 FAM160A1Q05DH4 1040 aa20.52■□□□□ 0.87
SFXN1-208ENST00000507823 TXNRD1Q16881 649 aa20.52■□□□□ 0.87
SFXN1-208ENST00000507823 TOMM22Q9NS69 142 aa20.52■□□□□ 0.87
SFXN1-208ENST00000507823 CLIC4Q9Y696 253 aa20.52■□□□□ 0.87
SFXN1-208ENST00000507823 USP17L12C9JPN9 530 aa20.51■□□□□ 0.87
SFXN1-208ENST00000507823 USP17L21D6R901 530 aa20.51■□□□□ 0.87
SFXN1-208ENST00000507823 PPP4CP60510 307 aa20.51■□□□□ 0.87
SFXN1-208ENST00000507823 ZSCAN30Q86W11 494 aa20.51■□□□□ 0.87
SFXN1-208ENST00000507823 FANCBQ8NB91 859 aa20.51■□□□□ 0.87
SFXN1-208ENST00000507823 ZSCAN10Q96SZ4 725 aaPredicted RBP20.51■□□□□ 0.87
SFXN1-208ENST00000507823 ZKSCAN3Q9BRR0 538 aa20.51■□□□□ 0.87
SFXN1-208ENST00000507823 AATFQ9NY61 560 aaKnown RBP eCLIP20.51■□□□□ 0.87
SFXN1-208ENST00000507823 CAMK4Q16566 473 aa20.51■□□□□ 0.87
SFXN1-208ENST00000507823 ANO1Q5XXA6 986 aa20.51■□□□□ 0.87
SFXN1-208ENST00000507823 SLC51AQ86UW1 340 aa20.51■□□□□ 0.87
SFXN1-208ENST00000507823 CCDC144CPQ8IYA2 1237 aa20.51■□□□□ 0.87
SFXN1-208ENST00000507823 CRACR2BQ8N4Y2 399 aaPredicted RBP20.51■□□□□ 0.87
SFXN1-208ENST00000507823 ENAHQ8N8S7 591 aaPredicted RBP20.51■□□□□ 0.87
SFXN1-208ENST00000507823 FAM200AQ8TCP9 573 aa20.51■□□□□ 0.87
SFXN1-208ENST00000507823 POLR3DP05423 398 aaPredicted RBP20.5■□□□□ 0.87
SFXN1-208ENST00000507823 IL1R1P14778 569 aa20.5■□□□□ 0.87
SFXN1-208ENST00000507823 ANKRD31Q8N7Z5 1873 aa20.5■□□□□ 0.87
SFXN1-208ENST00000507823 CYP2D7A0A087X1C5 515 aa20.5■□□□□ 0.87
SFXN1-208ENST00000507823 CCDC73Q6ZRK6 1079 aa20.5■□□□□ 0.87
SFXN1-208ENST00000507823 TMC4Q7Z404 712 aa20.5■□□□□ 0.87
SFXN1-208ENST00000507823 SLC26A6Q9BXS9 759 aa20.5■□□□□ 0.87
SFXN1-208ENST00000507823 PLSCR1O15162 318 aa20.49■□□□□ 0.87
SFXN1-208ENST00000507823 CAVIN2O95810 425 aa20.49■□□□□ 0.87
SFXN1-208ENST00000507823 LDHBP07195 334 aaKnown RBP20.49■□□□□ 0.87
SFXN1-208ENST00000507823 ME1P48163 572 aa20.49■□□□□ 0.87
SFXN1-208ENST00000507823 GSTO1P78417 241 aa20.49■□□□□ 0.87
SFXN1-208ENST00000507823 DZIP1Q86YF9 867 aaKnown RBP20.49■□□□□ 0.87
SFXN1-208ENST00000507823 ROBO3Q96MS0 1386 aa20.49■□□□□ 0.87
SFXN1-208ENST00000507823 SPTLC2O15270 562 aa20.49■□□□□ 0.87
SFXN1-208ENST00000507823 SLC39A14Q15043 492 aa20.49■□□□□ 0.87
SFXN1-208ENST00000507823 FMR1NBQ8N0W7 255 aaPredicted RBP20.49■□□□□ 0.87
SFXN1-208ENST00000507823 MRPS27Q92552 414 aaKnown RBP20.49■□□□□ 0.87
SFXN1-208ENST00000507823 NOL7Q9UMY1 257 aaKnown RBP20.49■□□□□ 0.87
SFXN1-208ENST00000507823 DEXIO95424 95 aa20.48■□□□□ 0.87
SFXN1-208ENST00000507823 STK38Q15208 465 aa20.48■□□□□ 0.87
SFXN1-208ENST00000507823 TRIM22Q8IYM9 498 aa20.48■□□□□ 0.87
SFXN1-208ENST00000507823 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.48■□□□□ 0.87
SFXN1-208ENST00000507823 FUT2Q10981 343 aa20.48■□□□□ 0.87
SFXN1-208ENST00000507823 TRIM29Q14134 588 aa20.48■□□□□ 0.87
SFXN1-208ENST00000507823 AXDND1Q5T1B0 1012 aaPredicted RBP20.48■□□□□ 0.87
SFXN1-208ENST00000507823 IQCA1Q86XH1 822 aa20.48■□□□□ 0.87
SFXN1-208ENST00000507823 CERS3Q8IU89 383 aa20.48■□□□□ 0.87
SFXN1-208ENST00000507823 CKAP2LQ8IYA6 745 aa20.48■□□□□ 0.87
SFXN1-208ENST00000507823 FSIP1Q8NA03 581 aa20.48■□□□□ 0.87
SFXN1-208ENST00000507823 RNF26Q9BY78 433 aaPredicted RBP20.48■□□□□ 0.87
SFXN1-208ENST00000507823 CCDC39Q9UFE4 941 aa20.48■□□□□ 0.87
SFXN1-208ENST00000507823 DDAH1O94760 285 aa20.47■□□□□ 0.87
SFXN1-208ENST00000507823 AKT1S1Q96B36 256 aa20.47■□□□□ 0.87
SFXN1-208ENST00000507823 CD209Q9NNX6 404 aa20.47■□□□□ 0.87
SFXN1-208ENST00000507823 GGA1Q9UJY5 639 aa20.47■□□□□ 0.87
SFXN1-208ENST00000507823 MYH6P13533 1939 aa20.47■□□□□ 0.87
SFXN1-208ENST00000507823 PPP6R2O75170 966 aa20.47■□□□□ 0.87
SFXN1-208ENST00000507823 MMP1P03956 469 aa20.47■□□□□ 0.87
SFXN1-208ENST00000507823 SLC3A2P08195 630 aaKnown RBP20.47■□□□□ 0.87
SFXN1-208ENST00000507823 CALM1P0DP23 149 aa20.47■□□□□ 0.87
SFXN1-208ENST00000507823 CALM2P0DP24 149 aa20.47■□□□□ 0.87
SFXN1-208ENST00000507823 CALM3P0DP25 149 aa20.47■□□□□ 0.87
SFXN1-208ENST00000507823 PTPAQ15257 358 aa20.47■□□□□ 0.87
SFXN1-208ENST00000507823 MAP3K14Q99558 947 aa20.47■□□□□ 0.87
SFXN1-208ENST00000507823 GUCY1A2P33402 732 aa20.46■□□□□ 0.87
SFXN1-208ENST00000507823 TROAPQ12815 778 aa20.46■□□□□ 0.87
SFXN1-208ENST00000507823 USP25Q9UHP3 1055 aa20.46■□□□□ 0.87
SFXN1-208ENST00000507823 DDX60LQ5H9U9 1706 aaKnown RBP20.46■□□□□ 0.87
SFXN1-208ENST00000507823 UFL1O94874 794 aa20.46■□□□□ 0.87
SFXN1-208ENST00000507823 RBM6P78332 1123 aaKnown RBP20.46■□□□□ 0.87
SFXN1-208ENST00000507823 STK11IPQ8N1F8 1099 aa20.46■□□□□ 0.87
SFXN1-208ENST00000507823 RBM28Q9NW13 759 aaKnown RBP20.46■□□□□ 0.87
SFXN1-208ENST00000507823 NAV1Q8NEY1 1877 aa20.46■□□□□ 0.87
SFXN1-208ENST00000507823 CDK5RAP2Q96SN8 1893 aa20.46■□□□□ 0.87
SFXN1-208ENST00000507823 FAM237AA0A1B0GTK4 181 aa20.45■□□□□ 0.86
SFXN1-208ENST00000507823 LDHCP07864 332 aa20.45■□□□□ 0.86
SFXN1-208ENST00000507823 IFIT1BQ5T764 474 aaKnown RBP20.45■□□□□ 0.86
SFXN1-208ENST00000507823 FOXP1Q9H334 677 aaPredicted RBP20.45■□□□□ 0.86
SFXN1-208ENST00000507823 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.45■□□□□ 0.86
SFXN1-208ENST00000507823 EP400Q96L91 3159 aa20.45■□□□□ 0.86
SFXN1-208ENST00000507823 UBE2Q2LH0YL09 131 aa20.45■□□□□ 0.86
SFXN1-208ENST00000507823 KINO60870 393 aaKnown RBP20.45■□□□□ 0.86
SFXN1-208ENST00000507823 CMA1P23946 247 aa20.45■□□□□ 0.86
SFXN1-208ENST00000507823 C12orf60Q5U649 245 aa20.45■□□□□ 0.86
SFXN1-208ENST00000507823 SASS6Q6UVJ0 657 aa20.45■□□□□ 0.86
SFXN1-208ENST00000507823 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.45■□□□□ 0.86
SFXN1-208ENST00000507823 GRIK5Q16478 980 aa20.44■□□□□ 0.86
SFXN1-208ENST00000507823 CATIPQ7Z7H3 387 aa20.44■□□□□ 0.86
SFXN1-208ENST00000507823 TBC1D16Q8TBP0 767 aa20.44■□□□□ 0.86
SFXN1-208ENST00000507823 MROH7-TTC4A0A0A0MT08 1334 aa20.44■□□□□ 0.86
SFXN1-208ENST00000507823 ADCY5O95622 1261 aa20.44■□□□□ 0.86
SFXN1-208ENST00000507823 SF3A1Q15459 793 aaKnown RBP20.44■□□□□ 0.86
SFXN1-208ENST00000507823 ANO6Q4KMQ2 910 aa20.44■□□□□ 0.86
SFXN1-208ENST00000507823 SP8Q8IXZ3 490 aa20.44■□□□□ 0.86
SFXN1-208ENST00000507823 FAM163AQ96GL9 167 aaPredicted RBP20.44■□□□□ 0.86
SFXN1-208ENST00000507823 JAG2Q9Y219 1238 aa20.44■□□□□ 0.86
SFXN1-208ENST00000507823 MORC2Q9Y6X9 1032 aaPredicted RBP20.44■□□□□ 0.86
SFXN1-208ENST00000507823 FAM205AQ6ZU69 1335 aa20.43■□□□□ 0.86
SFXN1-208ENST00000507823 PRPF3O43395 683 aaKnown RBP20.43■□□□□ 0.86
SFXN1-208ENST00000507823 BAG3O95817 575 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms