RNA–Protein interactions for RNA: ENST00000505884.5

CCND3-209, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-209ENST00000505884 PTCH2Q9Y6C5 1203 aa22.24■■□□□ 1.15
CCND3-209ENST00000505884 SIPA1L1O43166 1804 aa22.24■■□□□ 1.15
CCND3-209ENST00000505884 PTPRFP10586 1907 aa22.23■■□□□ 1.15
CCND3-209ENST00000505884 CXCL11O14625 94 aa22.23■■□□□ 1.15
CCND3-209ENST00000505884 NPM3O75607 178 aaKnown RBP22.23■■□□□ 1.15
CCND3-209ENST00000505884 KIF22Q14807 665 aa22.23■■□□□ 1.15
CCND3-209ENST00000505884 ZCCHC17Q9NP64 241 aaKnown RBP22.23■■□□□ 1.15
CCND3-209ENST00000505884 PALD1Q9ULE6 856 aa22.23■■□□□ 1.15
CCND3-209ENST00000505884 FOCADQ5VW36 1801 aa22.22■■□□□ 1.15
CCND3-209ENST00000505884 A0A0G2JLL6 359 aaPredicted RBP22.22■■□□□ 1.15
CCND3-209ENST00000505884 TBC1D12O60347 775 aa22.22■■□□□ 1.15
CCND3-209ENST00000505884 CTGFP29279 349 aa22.22■■□□□ 1.15
CCND3-209ENST00000505884 HSP90AB4PQ58FF6 505 aa22.22■■□□□ 1.15
CCND3-209ENST00000505884 C17orf99Q6UX52 265 aa22.22■■□□□ 1.15
CCND3-209ENST00000505884 PRRT2Q7Z6L0 340 aaPredicted RBP22.22■■□□□ 1.15
CCND3-209ENST00000505884 RPAP2Q8IXW5 612 aaPredicted RBP22.22■■□□□ 1.15
CCND3-209ENST00000505884 FLT1P17948 1338 aa22.22■■□□□ 1.15
CCND3-209ENST00000505884 POTEFA5A3E0 1075 aa22.21■■□□□ 1.15
CCND3-209ENST00000505884 HMMRO75330 724 aa22.21■■□□□ 1.15
CCND3-209ENST00000505884 MAP4K4O95819 1239 aaPredicted RBP22.21■■□□□ 1.15
CCND3-209ENST00000505884 PLCG2P16885 1265 aa22.21■■□□□ 1.15
CCND3-209ENST00000505884 PPP4CP60510 307 aa22.21■■□□□ 1.15
CCND3-209ENST00000505884 SHROOM1Q2M3G4 852 aaPredicted RBP22.21■■□□□ 1.15
CCND3-209ENST00000505884 FASTKD5Q7L8L6 764 aaKnown RBP22.2■■□□□ 1.14
CCND3-209ENST00000505884 CLASRPQ8N2M8 674 aaKnown RBP22.2■■□□□ 1.14
CCND3-209ENST00000505884 DNAJC2Q99543 621 aaKnown RBP22.2■■□□□ 1.14
CCND3-209ENST00000505884 IFIT2P09913 472 aaKnown RBP22.19■■□□□ 1.14
CCND3-209ENST00000505884 PSMC4P43686 418 aa22.19■■□□□ 1.14
CCND3-209ENST00000505884 SPP2Q13103 211 aa22.19■■□□□ 1.14
CCND3-209ENST00000505884 ARHGEF6Q15052 776 aa22.19■■□□□ 1.14
CCND3-209ENST00000505884 SLC9C1Q4G0N8 1177 aa22.19■■□□□ 1.14
CCND3-209ENST00000505884 TREML2Q5T2D2 321 aa22.19■■□□□ 1.14
CCND3-209ENST00000505884 CRACR2BQ8N4Y2 399 aaPredicted RBP22.19■■□□□ 1.14
CCND3-209ENST00000505884 SH3TC2Q8TF17 1288 aa22.19■■□□□ 1.14
CCND3-209ENST00000505884 KIF1BPQ96EK5 621 aa22.19■■□□□ 1.14
CCND3-209ENST00000505884 PARK7Q99497 189 aaKnown RBP22.19■■□□□ 1.14
CCND3-209ENST00000505884 PI4KBQ9UBF8 816 aa22.19■■□□□ 1.14
CCND3-209ENST00000505884 ADGRA2Q96PE1 1338 aa22.19■■□□□ 1.14
CCND3-209ENST00000505884 COL2A1P02458 1487 aaPredicted RBP22.19■■□□□ 1.14
CCND3-209ENST00000505884 MYH1P12882 1939 aa22.19■■□□□ 1.14
CCND3-209ENST00000505884 GDF11O95390 407 aa22.18■■□□□ 1.14
CCND3-209ENST00000505884 FMNL1O95466 1100 aaPredicted RBP22.18■■□□□ 1.14
CCND3-209ENST00000505884 CAP2P40123 477 aa22.18■■□□□ 1.14
CCND3-209ENST00000505884 USP5P45974 858 aa22.18■■□□□ 1.14
CCND3-209ENST00000505884 JAG1P78504 1218 aa22.18■■□□□ 1.14
CCND3-209ENST00000505884 MAP3K12Q12852 859 aa22.18■■□□□ 1.14
CCND3-209ENST00000505884 EDC3Q96F86 508 aaKnown RBP22.18■■□□□ 1.14
CCND3-209ENST00000505884 TRIM47Q96LD4 638 aa22.18■■□□□ 1.14
CCND3-209ENST00000505884 TRIM34Q9BYJ4 488 aa22.18■■□□□ 1.14
CCND3-209ENST00000505884 GOLIM4O00461 696 aa22.17■■□□□ 1.14
CCND3-209ENST00000505884 DHX36Q9H2U1 1008 aaKnown RBP22.17■■□□□ 1.14
CCND3-209ENST00000505884 DNAJC18Q9H819 358 aa22.17■■□□□ 1.14
CCND3-209ENST00000505884 HERC5Q9UII4 1024 aaKnown RBP22.17■■□□□ 1.14
CCND3-209ENST00000505884 SMARCA5O60264 1052 aaPredicted RBP22.16■■□□□ 1.14
CCND3-209ENST00000505884 HMGCS2P54868 508 aa22.16■■□□□ 1.14
CCND3-209ENST00000505884 MGAMO43451 1857 aa22.15■■□□□ 1.14
CCND3-209ENST00000505884 EN2P19622 333 aaPredicted RBP22.15■■□□□ 1.14
CCND3-209ENST00000505884 ZNF280CQ8ND82 737 aa22.15■■□□□ 1.14
CCND3-209ENST00000505884 SMCR8Q8TEV9 937 aaPredicted RBP22.15■■□□□ 1.14
CCND3-209ENST00000505884 ARMC5Q96C12 935 aa22.15■■□□□ 1.14
CCND3-209ENST00000505884 BRCA2P51587 3418 aa22.15■■□□□ 1.14
CCND3-209ENST00000505884 USP17L5A8MUK1 530 aa22.14■■□□□ 1.13
CCND3-209ENST00000505884 RAB11FIP3O75154 756 aa22.14■■□□□ 1.13
CCND3-209ENST00000505884 BCRP11274 1271 aa22.14■■□□□ 1.13
CCND3-209ENST00000505884 OSBPP22059 807 aa22.14■■□□□ 1.13
CCND3-209ENST00000505884 SLFNL1Q499Z3 407 aa22.14■■□□□ 1.13
CCND3-209ENST00000505884 SLC9C2Q5TAH2 1124 aa22.14■■□□□ 1.13
CCND3-209ENST00000505884 ZNF333Q96JL9 665 aa22.14■■□□□ 1.13
CCND3-209ENST00000505884 BOLA2Q9H3K6 86 aa22.14■■□□□ 1.13
CCND3-209ENST00000505884 CHMP4BQ9H444 224 aaKnown RBP22.14■■□□□ 1.13
CCND3-209ENST00000505884 HLA-DOAP06340 250 aa22.13■■□□□ 1.13
CCND3-209ENST00000505884 PDE3AQ14432 1141 aa22.13■■□□□ 1.13
CCND3-209ENST00000505884 NBPF11Q86T75 865 aa22.13■■□□□ 1.13
CCND3-209ENST00000505884 AGTPBP1Q9UPW5 1226 aa22.13■■□□□ 1.13
CCND3-209ENST00000505884 MYPNQ86TC9 1320 aa22.12■■□□□ 1.13
CCND3-209ENST00000505884 PDE4DIPQ5VU43 2346 aa22.12■■□□□ 1.13
CCND3-209ENST00000505884 MAGEB6P1A0A0J9YX57 407 aa22.12■■□□□ 1.13
CCND3-209ENST00000505884 PDE6AP16499 860 aa22.12■■□□□ 1.13
CCND3-209ENST00000505884 MTMR2Q13614 643 aa22.12■■□□□ 1.13
CCND3-209ENST00000505884 TTF1Q15361 905 aaPredicted RBP22.12■■□□□ 1.13
CCND3-209ENST00000505884 FOXP4Q8IVH2 680 aaPredicted RBP22.12■■□□□ 1.13
CCND3-209ENST00000505884 ANKRD13CQ8N6S4 541 aa22.12■■□□□ 1.13
CCND3-209ENST00000505884 TMEM106CQ9BVX2 250 aa22.12■■□□□ 1.13
CCND3-209ENST00000505884 SRRDQ9UH36 339 aa22.12■■□□□ 1.13
CCND3-209ENST00000505884 KIAA0100Q14667 2235 aaKnown RBP22.12■■□□□ 1.13
CCND3-209ENST00000505884 ZNF532Q9HCE3 1301 aa22.11■■□□□ 1.13
CCND3-209ENST00000505884 CHGBP05060 677 aa22.11■■□□□ 1.13
CCND3-209ENST00000505884 PRKCZQ05513 592 aa22.11■■□□□ 1.13
CCND3-209ENST00000505884 RAET1EQ8TD07 263 aa22.11■■□□□ 1.13
CCND3-209ENST00000505884 YTHDC1Q96MU7 727 aaKnown RBP22.11■■□□□ 1.13
CCND3-209ENST00000505884 GABRQQ9UN88 632 aa22.11■■□□□ 1.13
CCND3-209ENST00000505884 LOC285556D6RIA3 1793 aa22.11■■□□□ 1.13
CCND3-209ENST00000505884 FCGRTP55899 365 aa22.1■■□□□ 1.13
CCND3-209ENST00000505884 EVX2Q03828 476 aa22.1■■□□□ 1.13
CCND3-209ENST00000505884 NAV1Q8NEY1 1877 aa22.1■■□□□ 1.13
CCND3-209ENST00000505884 RIOK1Q9BRS2 568 aaKnown RBP22.1■■□□□ 1.13
CCND3-209ENST00000505884 AS3MTQ9HBK9 375 aa22.1■■□□□ 1.13
CCND3-209ENST00000505884 RBBP6Q7Z6E9 1792 aaKnown RBP22.1■■□□□ 1.13
CCND3-209ENST00000505884 GNRH1P01148 92 aa22.09■■□□□ 1.13
CCND3-209ENST00000505884 PROCA1Q8NCQ7 364 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms