RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 NKG7Q16617 165 aa6.12□□□□□ -1.43
HMGB1P29-201ENST00000505659 PHC3Q8NDX5 983 aa6.12□□□□□ -1.43
HMGB1P29-201ENST00000505659 CCDC39Q9UFE4 941 aa6.12□□□□□ -1.43
HMGB1P29-201ENST00000505659 LMNB1P20700 586 aa6.11□□□□□ -1.43
HMGB1P29-201ENST00000505659 CYP27C1Q4G0S4 372 aa6.11□□□□□ -1.43
HMGB1P29-201ENST00000505659 SCARA3Q6AZY7 606 aa6.11□□□□□ -1.43
HMGB1P29-201ENST00000505659 ARMCX6Q7L4S7 300 aa6.11□□□□□ -1.43
HMGB1P29-201ENST00000505659 HDXQ7Z353 690 aa6.11□□□□□ -1.43
HMGB1P29-201ENST00000505659 PLD6Q8N2A8 252 aaKnown RBP6.11□□□□□ -1.43
HMGB1P29-201ENST00000505659 JARID2Q92833 1246 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P29-201ENST00000505659 NOC4LQ9BVI4 516 aaKnown RBP6.11□□□□□ -1.43
HMGB1P29-201ENST00000505659 GFRA2O00451 464 aa6.1□□□□□ -1.43
HMGB1P29-201ENST00000505659 WNT11O96014 354 aa6.1□□□□□ -1.43
HMGB1P29-201ENST00000505659 GRK4P32298 578 aa6.1□□□□□ -1.43
HMGB1P29-201ENST00000505659 ETF1P62495 437 aaKnown RBP6.1□□□□□ -1.43
HMGB1P29-201ENST00000505659 BNC2Q6ZN30 1099 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P29-201ENST00000505659 ZNF574Q6ZN55 896 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P29-201ENST00000505659 CDC37L1Q7L3B6 337 aa6.1□□□□□ -1.43
HMGB1P29-201ENST00000505659 HEXIM2Q96MH2 286 aaKnown RBP6.1□□□□□ -1.43
HMGB1P29-201ENST00000505659 WNT10AQ9GZT5 417 aa6.1□□□□□ -1.43
HMGB1P29-201ENST00000505659 MIR1-1HGQ9H1L0 117 aa6.1□□□□□ -1.43
HMGB1P29-201ENST00000505659 PRDM10Q9NQV6 1147 aa6.1□□□□□ -1.43
HMGB1P29-201ENST00000505659 PRNPP04156 253 aa6.09□□□□□ -1.43
HMGB1P29-201ENST00000505659 ITIH2P19823 946 aa6.09□□□□□ -1.43
HMGB1P29-201ENST00000505659 CD96P40200 585 aa6.09□□□□□ -1.43
HMGB1P29-201ENST00000505659 MFAP1P55081 439 aaKnown RBP6.09□□□□□ -1.43
HMGB1P29-201ENST00000505659 SLBPQ14493 270 aaKnown RBP eCLIP6.09□□□□□ -1.43
HMGB1P29-201ENST00000505659 FAM214BQ7L5A3 538 aa6.09□□□□□ -1.43
HMGB1P29-201ENST00000505659 WFDC3Q8IUB2 231 aa6.09□□□□□ -1.43
HMGB1P29-201ENST00000505659 ABI1Q8IZP0 508 aa6.09□□□□□ -1.43
HMGB1P29-201ENST00000505659 ZNF507Q8TCN5 953 aa6.09□□□□□ -1.43
HMGB1P29-201ENST00000505659 COPRSQ9NQ92 184 aa6.09□□□□□ -1.43
HMGB1P29-201ENST00000505659 BSDC1Q9NW68 430 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P29-201ENST00000505659 ANGEL1Q9UNK9 670 aaKnown RBP6.09□□□□□ -1.43
HMGB1P29-201ENST00000505659 SNCAIPQ9Y6H5 919 aa6.09□□□□□ -1.43
HMGB1P29-201ENST00000505659 CNTNAP4Q9C0A0 1308 aa6.08□□□□□ -1.44
HMGB1P29-201ENST00000505659 PF4P02776 101 aa6.08□□□□□ -1.44
HMGB1P29-201ENST00000505659 OXCT1P55809 520 aa6.08□□□□□ -1.44
HMGB1P29-201ENST00000505659 FAM160A1Q05DH4 1040 aa6.08□□□□□ -1.44
HMGB1P29-201ENST00000505659 MRPL58Q14197 206 aaKnown RBP6.08□□□□□ -1.44
HMGB1P29-201ENST00000505659 VSIG10LQ86VR7 867 aa6.08□□□□□ -1.44
HMGB1P29-201ENST00000505659 XAGE3Q8WTP9 111 aa6.08□□□□□ -1.44
HMGB1P29-201ENST00000505659 RHOVQ96L33 236 aa6.08□□□□□ -1.44
HMGB1P29-201ENST00000505659 DPH2Q9BQC3 489 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P29-201ENST00000505659 PLAGL2Q9UPG8 496 aa6.08□□□□□ -1.44
HMGB1P29-201ENST00000505659 SLITRK5O94991 958 aa6.07□□□□□ -1.44
HMGB1P29-201ENST00000505659 EOMESO95936 686 aa6.07□□□□□ -1.44
HMGB1P29-201ENST00000505659 F13A1P00488 732 aa6.07□□□□□ -1.44
HMGB1P29-201ENST00000505659 ZNF16P17020 682 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P29-201ENST00000505659 GBP2P32456 591 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P29-201ENST00000505659 BNIP3Q12983 259 aa6.07□□□□□ -1.44
HMGB1P29-201ENST00000505659 CAMK2GQ13555 558 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P29-201ENST00000505659 SPRED2Q7Z698 418 aa6.07□□□□□ -1.44
HMGB1P29-201ENST00000505659 FLCNQ8NFG4 579 aa6.07□□□□□ -1.44
HMGB1P29-201ENST00000505659 PAK6Q9NQU5 681 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P29-201ENST00000505659 CORINQ9Y5Q5 1042 aa6.07□□□□□ -1.44
HMGB1P29-201ENST00000505659 MINDY4BA8MYZ0 360 aa6.06□□□□□ -1.44
HMGB1P29-201ENST00000505659 LRIG2O94898 1065 aa6.06□□□□□ -1.44
HMGB1P29-201ENST00000505659 CEACAM5P06731 702 aa6.06□□□□□ -1.44
HMGB1P29-201ENST00000505659 RLBP1P12271 317 aa6.06□□□□□ -1.44
HMGB1P29-201ENST00000505659 RPL6Q02878 288 aaKnown RBP6.06□□□□□ -1.44
HMGB1P29-201ENST00000505659 LMNB2Q03252 620 aa6.06□□□□□ -1.44
HMGB1P29-201ENST00000505659 TRIM26Q12899 539 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P29-201ENST00000505659 TSNAXIP1Q2TAA8 658 aa6.06□□□□□ -1.44
HMGB1P29-201ENST00000505659 ZNF326Q5BKZ1 582 aaKnown RBP6.06□□□□□ -1.44
HMGB1P29-201ENST00000505659 PRAMEF13Q5VWM6 474 aa6.06□□□□□ -1.44
HMGB1P29-201ENST00000505659 KCT2Q8NC54 265 aa6.06□□□□□ -1.44
HMGB1P29-201ENST00000505659 RIN3Q8TB24 985 aa6.06□□□□□ -1.44
HMGB1P29-201ENST00000505659 NETO1Q8TDF5 533 aa6.06□□□□□ -1.44
HMGB1P29-201ENST00000505659 BCL7CQ8WUZ0 217 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P29-201ENST00000505659 TMEM74Q96NL1 305 aa6.06□□□□□ -1.44
HMGB1P29-201ENST00000505659 MIPEPQ99797 713 aa6.06□□□□□ -1.44
HMGB1P29-201ENST00000505659 FOXQ1Q9C009 403 aa6.06□□□□□ -1.44
HMGB1P29-201ENST00000505659 KBTBD4Q9NVX7 518 aa6.06□□□□□ -1.44
HMGB1P29-201ENST00000505659 TJP2Q9UDY2 1190 aa6.06□□□□□ -1.44
HMGB1P29-201ENST00000505659 FAM221AA4D161 298 aa6.05□□□□□ -1.44
HMGB1P29-201ENST00000505659 PRR33A8MZF0 331 aa6.05□□□□□ -1.44
HMGB1P29-201ENST00000505659 PGRP06401 933 aa6.05□□□□□ -1.44
HMGB1P29-201ENST00000505659 LDLRAD1Q5T700 205 aa6.05□□□□□ -1.44
HMGB1P29-201ENST00000505659 ARHGAP27Q6ZUM4 889 aa6.05□□□□□ -1.44
HMGB1P29-201ENST00000505659 HID1Q8IV36 788 aa6.05□□□□□ -1.44
HMGB1P29-201ENST00000505659 TP53INP2Q8IXH6 220 aa6.05□□□□□ -1.44
HMGB1P29-201ENST00000505659 FBXO27Q8NI29 283 aa6.05□□□□□ -1.44
HMGB1P29-201ENST00000505659 CILPO75339 1184 aa6.04□□□□□ -1.44
HMGB1P29-201ENST00000505659 CST3P01034 146 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P29-201ENST00000505659 GARTP22102 1010 aa6.04□□□□□ -1.44
HMGB1P29-201ENST00000505659 IFI16Q16666 785 aaKnown RBP6.04□□□□□ -1.44
HMGB1P29-201ENST00000505659 ERMP1Q7Z2K6 904 aa6.04□□□□□ -1.44
HMGB1P29-201ENST00000505659 RELL1Q8IUW5 271 aa6.04□□□□□ -1.44
HMGB1P29-201ENST00000505659 SPACA3Q8IXA5 215 aa6.04□□□□□ -1.44
HMGB1P29-201ENST00000505659 ACSF2Q96CM8 615 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P29-201ENST00000505659 RSRP1Q9BUV0 290 aa6.04□□□□□ -1.44
HMGB1P29-201ENST00000505659 ADGRE2Q9UHX3 823 aa6.04□□□□□ -1.44
HMGB1P29-201ENST00000505659 TLR3O15455 904 aaKnown RBP6.03□□□□□ -1.44
HMGB1P29-201ENST00000505659 GRIN3BO60391 1043 aa6.03□□□□□ -1.44
HMGB1P29-201ENST00000505659 CD8BP10966 210 aa6.03□□□□□ -1.44
HMGB1P29-201ENST00000505659 CAP2P40123 477 aa6.03□□□□□ -1.44
HMGB1P29-201ENST00000505659 IRAK1P51617 712 aa6.03□□□□□ -1.44
HMGB1P29-201ENST00000505659 NKPD1Q17RQ9 610 aa6.03□□□□□ -1.44
HMGB1P29-201ENST00000505659 SNAP47Q5SQN1 464 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms