RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 SNX21Q969T3 373 aa11.1□□□□□ -0.63
TPM3-218ENST00000505010 CYP46A1Q9Y6A2 500 aa11.1□□□□□ -0.63
TPM3-218ENST00000505010 GAKO14976 1311 aa11.09□□□□□ -0.63
TPM3-218ENST00000505010 POLR2AP24928 1970 aaKnown RBP11.09□□□□□ -0.63
TPM3-218ENST00000505010 ZNF213O14771 459 aa11.09□□□□□ -0.63
TPM3-218ENST00000505010 TBC1D8O95759 1140 aa11.09□□□□□ -0.63
TPM3-218ENST00000505010 CPA1P15085 419 aa11.09□□□□□ -0.63
TPM3-218ENST00000505010 RPS12P25398 132 aaKnown RBP11.09□□□□□ -0.63
TPM3-218ENST00000505010 ALX1Q15699 326 aa11.09□□□□□ -0.63
TPM3-218ENST00000505010 FBXO46Q6PJ61 603 aaPredicted RBP11.09□□□□□ -0.63
TPM3-218ENST00000505010 BLOC1S2Q6QNY1 142 aa11.09□□□□□ -0.63
TPM3-218ENST00000505010 STOX1Q6ZVD7 989 aa11.09□□□□□ -0.63
TPM3-218ENST00000505010 RASAL3Q86YV0 1011 aa11.09□□□□□ -0.63
TPM3-218ENST00000505010 CERS3Q8IU89 383 aa11.09□□□□□ -0.63
TPM3-218ENST00000505010 KIAA0825Q8IV33 1275 aa11.09□□□□□ -0.63
TPM3-218ENST00000505010 SH3RF3Q8TEJ3 882 aaPredicted RBP11.09□□□□□ -0.63
TPM3-218ENST00000505010 TM6SF1Q9BZW5 370 aa11.09□□□□□ -0.63
TPM3-218ENST00000505010 DAGLAQ9Y4D2 1042 aa11.09□□□□□ -0.63
TPM3-218ENST00000505010 MYO3BQ8WXR4 1341 aa11.09□□□□□ -0.63
TPM3-218ENST00000505010 GPR75-ASB3A0A0A6YYF3 556 aa11.08□□□□□ -0.64
TPM3-218ENST00000505010 E7EWF7 191 aa11.08□□□□□ -0.64
TPM3-218ENST00000505010 PLCG2P16885 1265 aa11.08□□□□□ -0.64
TPM3-218ENST00000505010 USP5P45974 858 aa11.08□□□□□ -0.64
TPM3-218ENST00000505010 PPP4CP60510 307 aa11.08□□□□□ -0.64
TPM3-218ENST00000505010 TSGA10IPQ3SY00 556 aa11.08□□□□□ -0.64
TPM3-218ENST00000505010 NOL8Q76FK4 1167 aaKnown RBP11.08□□□□□ -0.64
TPM3-218ENST00000505010 RUFY3Q7L099 469 aa11.08□□□□□ -0.64
TPM3-218ENST00000505010 TBC1D10CQ8IV04 446 aa11.08□□□□□ -0.64
TPM3-218ENST00000505010 TEKT1Q969V4 418 aa11.08□□□□□ -0.64
TPM3-218ENST00000505010 CDCA5Q96FF9 252 aa11.08□□□□□ -0.64
TPM3-218ENST00000505010 NEK1Q96PY6 1258 aa11.08□□□□□ -0.64
TPM3-218ENST00000505010 ZSWIM6Q9HCJ5 1215 aa11.08□□□□□ -0.64
TPM3-218ENST00000505010 CENPFP49454 3210 aa11.08□□□□□ -0.64
TPM3-218ENST00000505010 MINDY4BA8MYZ0 360 aa11.07□□□□□ -0.64
TPM3-218ENST00000505010 K7ELQ4 463 aaPredicted RBP11.07□□□□□ -0.64
TPM3-218ENST00000505010 RPS6KB1P23443 525 aa11.07□□□□□ -0.64
TPM3-218ENST00000505010 CRKP46108 304 aa11.07□□□□□ -0.64
TPM3-218ENST00000505010 FKBP1BP68106 108 aa11.07□□□□□ -0.64
TPM3-218ENST00000505010 KIF4BQ2VIQ3 1234 aa11.07□□□□□ -0.64
TPM3-218ENST00000505010 RSBN1LQ6PCB5 846 aaPredicted RBP11.07□□□□□ -0.64
TPM3-218ENST00000505010 RALYLQ86SE5 291 aaKnown RBP11.07□□□□□ -0.64
TPM3-218ENST00000505010 TEX11Q8IYF3 940 aa11.07□□□□□ -0.64
TPM3-218ENST00000505010 NBPF3Q9H094 633 aa11.07□□□□□ -0.64
TPM3-218ENST00000505010 PDRG1Q9NUG6 133 aa11.07□□□□□ -0.64
TPM3-218ENST00000505010 GGA3Q9NZ52 723 aa11.07□□□□□ -0.64
TPM3-218ENST00000505010 CYP2D7A0A087X1C5 515 aa11.06□□□□□ -0.64
TPM3-218ENST00000505010 GPR25O00155 361 aa11.06□□□□□ -0.64
TPM3-218ENST00000505010 HMGB1P09429 215 aaKnown RBP11.06□□□□□ -0.64
TPM3-218ENST00000505010 MCM2P49736 904 aa11.06□□□□□ -0.64
TPM3-218ENST00000505010 RBM5P52756 815 aaKnown RBP eCLIP11.06□□□□□ -0.64
TPM3-218ENST00000505010 AK2P54819 239 aa11.06□□□□□ -0.64
TPM3-218ENST00000505010 CTDSPL2Q05D32 466 aa11.06□□□□□ -0.64
TPM3-218ENST00000505010 PPARAQ07869 468 aa11.06□□□□□ -0.64
TPM3-218ENST00000505010 NOM1Q5C9Z4 860 aaKnown RBP11.06□□□□□ -0.64
TPM3-218ENST00000505010 GIMAP6Q6P9H5 292 aa11.06□□□□□ -0.64
TPM3-218ENST00000505010 HHIPL2Q6UWX4 724 aa11.06□□□□□ -0.64
TPM3-218ENST00000505010 MAPKAPK5Q8IW41 473 aa11.06□□□□□ -0.64
TPM3-218ENST00000505010 TGFBRAP1Q8WUH2 860 aa11.06□□□□□ -0.64
TPM3-218ENST00000505010 FAM163AQ96GL9 167 aaPredicted RBP11.06□□□□□ -0.64
TPM3-218ENST00000505010 TCEANC2Q96MN5 208 aa11.06□□□□□ -0.64
TPM3-218ENST00000505010 TTC14Q96N46 770 aa11.06□□□□□ -0.64
TPM3-218ENST00000505010 DCP1AQ9NPI6 582 aaPredicted RBP11.06□□□□□ -0.64
TPM3-218ENST00000505010 ATP8A2Q9NTI2 1148 aa11.06□□□□□ -0.64
TPM3-218ENST00000505010 ARPP21Q9UBL0 812 aaPredicted RBP11.06□□□□□ -0.64
TPM3-218ENST00000505010 NEDD4P46934 1319 aa11.06□□□□□ -0.64
TPM3-218ENST00000505010 BRCA2P51587 3418 aa11.05□□□□□ -0.64
TPM3-218ENST00000505010 FKTNO75072 461 aa11.05□□□□□ -0.64
TPM3-218ENST00000505010 HSP90AA1P07900 732 aaKnown RBP11.05□□□□□ -0.64
TPM3-218ENST00000505010 VIL1P09327 827 aaKnown RBP11.05□□□□□ -0.64
TPM3-218ENST00000505010 TM4SF4P48230 202 aa11.05□□□□□ -0.64
TPM3-218ENST00000505010 FXR1P51114 621 aaKnown RBP eCLIP11.05□□□□□ -0.64
TPM3-218ENST00000505010 RHBDL3P58872 404 aa11.05□□□□□ -0.64
TPM3-218ENST00000505010 HDLBPQ00341 1268 aaKnown RBP11.05□□□□□ -0.64
TPM3-218ENST00000505010 TRDNQ13061 729 aa11.05□□□□□ -0.64
TPM3-218ENST00000505010 COL9A3Q14050 684 aaPredicted RBP11.05□□□□□ -0.64
TPM3-218ENST00000505010 SLC4A8Q2Y0W8 1093 aa11.05□□□□□ -0.64
TPM3-218ENST00000505010 AMOTL1Q8IY63 956 aa11.05□□□□□ -0.64
TPM3-218ENST00000505010 STK11IPQ8N1F8 1099 aa11.05□□□□□ -0.64
TPM3-218ENST00000505010 SPRYD3Q8NCJ5 442 aa11.05□□□□□ -0.64
TPM3-218ENST00000505010 IL27Q8NEV9 243 aa11.05□□□□□ -0.64
TPM3-218ENST00000505010 NCOA7Q8NI08 942 aa11.05□□□□□ -0.64
TPM3-218ENST00000505010 USP40Q9NVE5 1235 aa11.05□□□□□ -0.64
TPM3-218ENST00000505010 MCM9Q9NXL9 1143 aa11.05□□□□□ -0.64
TPM3-218ENST00000505010 FLT1P17948 1338 aa11.05□□□□□ -0.64
TPM3-218ENST00000505010 USP17L12C9JPN9 530 aa11.04□□□□□ -0.64
TPM3-218ENST00000505010 USP17L21D6R901 530 aa11.04□□□□□ -0.64
TPM3-218ENST00000505010 USP17L8P0C7I0 530 aa11.04□□□□□ -0.64
TPM3-218ENST00000505010 CYP2D6P10635 497 aa11.04□□□□□ -0.64
TPM3-218ENST00000505010 FGD1P98174 961 aa11.04□□□□□ -0.64
TPM3-218ENST00000505010 PICALMQ13492 652 aa11.04□□□□□ -0.64
TPM3-218ENST00000505010 RRP12Q5JTH9 1297 aaKnown RBP11.04□□□□□ -0.64
TPM3-218ENST00000505010 AKNAD1Q5T1N1 836 aa11.04□□□□□ -0.64
TPM3-218ENST00000505010 ANGEL2Q5VTE6 544 aaKnown RBP11.04□□□□□ -0.64
TPM3-218ENST00000505010 CTR9Q6PD62 1173 aa11.04□□□□□ -0.64
TPM3-218ENST00000505010 MFSD6Q6ZSS7 791 aa11.04□□□□□ -0.64
TPM3-218ENST00000505010 DHX32Q7L7V1 743 aaKnown RBP11.04□□□□□ -0.64
TPM3-218ENST00000505010 MB21D2Q8IYB1 491 aaPredicted RBP11.04□□□□□ -0.64
TPM3-218ENST00000505010 ZDHHC15Q96MV8 337 aa11.04□□□□□ -0.64
TPM3-218ENST00000505010 RNF41Q9H4P4 317 aaPredicted RBP11.04□□□□□ -0.64
TPM3-218ENST00000505010 TOMM22Q9NS69 142 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms