RNA–Protein interactions for RNA: ENST00000504643.5

MATR3-210, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 2,560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-210ENST00000504643 DPF3Q92784 378 aa9.54□□□□□ -0.88
MATR3-210ENST00000504643 FRAT1Q92837 279 aaPredicted RBP9.54□□□□□ -0.88
MATR3-210ENST00000504643 TRIM34Q9BYJ4 488 aa9.54□□□□□ -0.88
MATR3-210ENST00000504643 DDX4Q9NQI0 724 aaKnown RBP9.54□□□□□ -0.88
MATR3-210ENST00000504643 AK9Q5TCS8 1911 aa9.54□□□□□ -0.88
MATR3-210ENST00000504643 TRIM75PA6NK02 468 aa9.54□□□□□ -0.88
MATR3-210ENST00000504643 SGPL1O95470 568 aa9.54□□□□□ -0.88
MATR3-210ENST00000504643 ASNSP08243 561 aa9.54□□□□□ -0.88
MATR3-210ENST00000504643 PRKCZQ05513 592 aa9.54□□□□□ -0.88
MATR3-210ENST00000504643 WDR18Q9BV38 432 aa9.54□□□□□ -0.88
MATR3-210ENST00000504643 TRMT44Q8IYL2 757 aaKnown RBP9.53□□□□□ -0.88
MATR3-210ENST00000504643 SSH3Q8TE77 659 aa9.53□□□□□ -0.88
MATR3-210ENST00000504643 TMOD4Q9NZQ9 345 aa9.53□□□□□ -0.88
MATR3-210ENST00000504643 HLA-DOAP06340 250 aa9.53□□□□□ -0.88
MATR3-210ENST00000504643 MS4A1P11836 297 aa9.53□□□□□ -0.88
MATR3-210ENST00000504643 CTGFP29279 349 aa9.53□□□□□ -0.88
MATR3-210ENST00000504643 FLT3LGP49771 235 aa9.53□□□□□ -0.88
MATR3-210ENST00000504643 SPP2Q13103 211 aa9.53□□□□□ -0.88
MATR3-210ENST00000504643 POLA2Q14181 598 aa9.53□□□□□ -0.88
MATR3-210ENST00000504643 MTFR1Q15390 333 aa9.53□□□□□ -0.88
MATR3-210ENST00000504643 U2AF1L4Q8WU68 220 aaKnown RBP9.53□□□□□ -0.88
MATR3-210ENST00000504643 KIAA0100Q14667 2235 aaKnown RBP9.52□□□□□ -0.88
MATR3-210ENST00000504643 MYCP01106 439 aaPredicted RBP9.52□□□□□ -0.89
MATR3-210ENST00000504643 HSP90AB4PQ58FF6 505 aa9.52□□□□□ -0.89
MATR3-210ENST00000504643 TNNI3KQ59H18 835 aa9.52□□□□□ -0.89
MATR3-210ENST00000504643 METTL16Q86W50 562 aaKnown RBP9.52□□□□□ -0.89
MATR3-210ENST00000504643 FTSJ3Q8IY81 847 aaKnown RBP9.52□□□□□ -0.89
MATR3-210ENST00000504643 ANKLE1Q8NAG6 615 aa9.52□□□□□ -0.89
MATR3-210ENST00000504643 NOP58Q9Y2X3 529 aaKnown RBP9.52□□□□□ -0.89
MATR3-210ENST00000504643 FPGT-TNNI3KV9GXZ4 949 aa9.52□□□□□ -0.89
MATR3-210ENST00000504643 MYH2Q9UKX2 1941 aa9.52□□□□□ -0.89
MATR3-210ENST00000504643 SURF6O75683 361 aaKnown RBP9.52□□□□□ -0.89
MATR3-210ENST00000504643 TFRCP02786 760 aaKnown RBP9.52□□□□□ -0.89
MATR3-210ENST00000504643 HOXA7P31268 230 aaPredicted RBP9.52□□□□□ -0.89
MATR3-210ENST00000504643 MCAMP43121 646 aa9.52□□□□□ -0.89
MATR3-210ENST00000504643 ERC1Q8IUD2 1116 aa9.52□□□□□ -0.89
MATR3-210ENST00000504643 CRACR2BQ8N4Y2 399 aaPredicted RBP9.52□□□□□ -0.89
MATR3-210ENST00000504643 TAOK2Q9UL54 1235 aa9.52□□□□□ -0.89
MATR3-210ENST00000504643 PNMA6EA0A0J9YXQ4 647 aa9.51□□□□□ -0.89
MATR3-210ENST00000504643 A0A1W2PPC1 479 aa9.51□□□□□ -0.89
MATR3-210ENST00000504643 FARP2O94887 1054 aaPredicted RBP9.51□□□□□ -0.89
MATR3-210ENST00000504643 TBC1D9Q6ZT07 1266 aa9.51□□□□□ -0.89
MATR3-210ENST00000504643 UBE2Q1Q7Z7E8 422 aa9.51□□□□□ -0.89
MATR3-210ENST00000504643 ANKRD13CQ8N6S4 541 aa9.51□□□□□ -0.89
MATR3-210ENST00000504643 H0YGN5 161 aa9.51□□□□□ -0.89
MATR3-210ENST00000504643 BCAR3O75815 825 aa9.51□□□□□ -0.89
MATR3-210ENST00000504643 BACE1P56817 501 aa9.51□□□□□ -0.89
MATR3-210ENST00000504643 IRX3P78415 501 aaPredicted RBP9.51□□□□□ -0.89
MATR3-210ENST00000504643 MORF4L1Q9UBU8 362 aa9.51□□□□□ -0.89
MATR3-210ENST00000504643 GABRQQ9UN88 632 aa9.51□□□□□ -0.89
MATR3-210ENST00000504643 COLQQ9Y215 455 aaPredicted RBP9.51□□□□□ -0.89
MATR3-210ENST00000504643 USP17L10C9JJH3 530 aa9.5□□□□□ -0.89
MATR3-210ENST00000504643 HMGCRP04035 888 aa9.5□□□□□ -0.89
MATR3-210ENST00000504643 INHAP05111 366 aa9.5□□□□□ -0.89
MATR3-210ENST00000504643 TMEM57Q8N5G2 664 aa9.5□□□□□ -0.89
MATR3-210ENST00000504643 ZNF384Q8TF68 577 aa9.5□□□□□ -0.89
MATR3-210ENST00000504643 CLUAP1Q96AJ1 413 aa9.5□□□□□ -0.89
MATR3-210ENST00000504643 SHISA4Q96DD7 197 aa9.5□□□□□ -0.89
MATR3-210ENST00000504643 CHMP4BQ9H444 224 aaKnown RBP9.5□□□□□ -0.89
MATR3-210ENST00000504643 DOCK2Q92608 1830 aa9.5□□□□□ -0.89
MATR3-210ENST00000504643 FXR1P51114 621 aaKnown RBP eCLIP9.5□□□□□ -0.897e-7■■□□□ 11.6
MATR3-210ENST00000504643 HMGCS2P54868 508 aa9.5□□□□□ -0.89
MATR3-210ENST00000504643 TTC6Q86TZ1 520 aa9.5□□□□□ -0.89
MATR3-210ENST00000504643 CCAR1Q8IX12 1150 aaKnown RBP9.5□□□□□ -0.89
MATR3-210ENST00000504643 SH3RF3Q8TEJ3 882 aaPredicted RBP9.5□□□□□ -0.89
MATR3-210ENST00000504643 SOCS4Q8WXH5 440 aa9.5□□□□□ -0.89
MATR3-210ENST00000504643 UNC93B1Q9H1C4 597 aa9.5□□□□□ -0.89
MATR3-210ENST00000504643 ASCC2Q9H1I8 757 aaPredicted RBP9.5□□□□□ -0.89
MATR3-210ENST00000504643 PAK6Q9NQU5 681 aaPredicted RBP9.5□□□□□ -0.89
MATR3-210ENST00000504643 AATFQ9NY61 560 aaKnown RBP eCLIP9.5□□□□□ -0.89
MATR3-210ENST00000504643 RPTORQ8N122 1335 aa9.5□□□□□ -0.89
MATR3-210ENST00000504643 EVI5O60447 810 aa9.49□□□□□ -0.89
MATR3-210ENST00000504643 XRCC5P13010 732 aaKnown RBP9.49□□□□□ -0.89
MATR3-210ENST00000504643 MAPK4P31152 587 aa9.49□□□□□ -0.89
MATR3-210ENST00000504643 USP14P54578 494 aa9.49□□□□□ -0.89
MATR3-210ENST00000504643 MAP3K12Q12852 859 aa9.49□□□□□ -0.89
MATR3-210ENST00000504643 TTF1Q15361 905 aaPredicted RBP9.49□□□□□ -0.89
MATR3-210ENST00000504643 TREML2Q5T2D2 321 aa9.49□□□□□ -0.89
MATR3-210ENST00000504643 NECAB2Q7Z6G3 386 aa9.49□□□□□ -0.89
MATR3-210ENST00000504643 GPRC5AQ8NFJ5 357 aa9.49□□□□□ -0.89
MATR3-210ENST00000504643 TGFBRAP1Q8WUH2 860 aa9.49□□□□□ -0.89
MATR3-210ENST00000504643 CRISPLD2Q9H0B8 497 aa9.49□□□□□ -0.89
MATR3-210ENST00000504643 HMX1Q9NP08 348 aaPredicted RBP9.49□□□□□ -0.89
MATR3-210ENST00000504643 GLRX3O76003 335 aaKnown RBP9.49□□□□□ -0.89
MATR3-210ENST00000504643 ECM2O94769 699 aaPredicted RBP9.49□□□□□ -0.89
MATR3-210ENST00000504643 PDE3AQ14432 1141 aa9.49□□□□□ -0.89
MATR3-210ENST00000504643 USP17L2Q6R6M4 530 aa9.49□□□□□ -0.89
MATR3-210ENST00000504643 PI16Q6UXB8 463 aa9.49□□□□□ -0.89
MATR3-210ENST00000504643 NUDT12Q9BQG2 462 aa9.49□□□□□ -0.89
MATR3-210ENST00000504643 DBNDD2Q9BQY9 259 aa9.49□□□□□ -0.89
MATR3-210ENST00000504643 ZBTB7BO15156 539 aaPredicted RBP9.48□□□□□ -0.89
MATR3-210ENST00000504643 CYP2E1P05181 493 aaPredicted RBP9.48□□□□□ -0.89
MATR3-210ENST00000504643 CCNA1P78396 465 aa9.48□□□□□ -0.89
MATR3-210ENST00000504643 DEFB118Q96PH6 123 aa9.48□□□□□ -0.89
MATR3-210ENST00000504643 EHD4Q9H223 541 aa9.48□□□□□ -0.89
MATR3-210ENST00000504643 DOCK1Q14185 1865 aa9.48□□□□□ -0.89
MATR3-210ENST00000504643 CYP7A1P22680 504 aa9.48□□□□□ -0.89
MATR3-210ENST00000504643 ITPRIPQ8IWB1 547 aa9.48□□□□□ -0.89
MATR3-210ENST00000504643 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.48□□□□□ -0.894e-16■■■■□ 19.6
MATR3-210ENST00000504643 CABP5Q9NP86 173 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms