RNA–Protein interactions for RNA: ENST00000504606.1

TRIO-206, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-206ENST00000504606 HIRAP54198 1017 aaPredicted RBP13.43□□□□□ -0.26
TRIO-206ENST00000504606 PDE4BQ07343 736 aa13.43□□□□□ -0.26
TRIO-206ENST00000504606 TNFAIP1Q13829 316 aa13.43□□□□□ -0.26
TRIO-206ENST00000504606 COL9A3Q14050 684 aaPredicted RBP13.43□□□□□ -0.26
TRIO-206ENST00000504606 FAM83AQ86UY5 434 aa13.43□□□□□ -0.26
TRIO-206ENST00000504606 MB21D2Q8IYB1 491 aaPredicted RBP13.43□□□□□ -0.26
TRIO-206ENST00000504606 FAM151AQ8WW52 585 aa13.43□□□□□ -0.26
TRIO-206ENST00000504606 KRT23Q9C075 422 aa13.43□□□□□ -0.26
TRIO-206ENST00000504606 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.43□□□□□ -0.26
TRIO-206ENST00000504606 ATRNL1Q5VV63 1379 aa13.43□□□□□ -0.26
TRIO-206ENST00000504606 WDR90Q96KV7 1748 aa13.42□□□□□ -0.26
TRIO-206ENST00000504606 SCN4AP35499 1836 aa13.42□□□□□ -0.26
TRIO-206ENST00000504606 IQCA1LA6NCM1 817 aa13.42□□□□□ -0.26
TRIO-206ENST00000504606 PRDM1O75626 825 aa13.42□□□□□ -0.26
TRIO-206ENST00000504606 FGRP09769 529 aa13.42□□□□□ -0.26
TRIO-206ENST00000504606 EPHX2P34913 555 aa13.42□□□□□ -0.26
TRIO-206ENST00000504606 ANGEL2Q5VTE6 544 aaKnown RBP13.42□□□□□ -0.26
TRIO-206ENST00000504606 C16orf86Q6ZW13 317 aa13.42□□□□□ -0.26
TRIO-206ENST00000504606 DHX32Q7L7V1 743 aaKnown RBP13.42□□□□□ -0.26
TRIO-206ENST00000504606 SH3BP5LQ7L8J4 393 aa13.42□□□□□ -0.26
TRIO-206ENST00000504606 APOBEC3FQ8IUX4 373 aaKnown RBP13.42□□□□□ -0.26
TRIO-206ENST00000504606 SLC44A5Q8NCS7 719 aa13.42□□□□□ -0.26
TRIO-206ENST00000504606 TCEANC2Q96MN5 208 aa13.42□□□□□ -0.26
TRIO-206ENST00000504606 PDRG1Q9NUG6 133 aa13.42□□□□□ -0.26
TRIO-206ENST00000504606 GGA3Q9NZ52 723 aa13.42□□□□□ -0.26
TRIO-206ENST00000504606 SCAF8Q9UPN6 1271 aaKnown RBP13.42□□□□□ -0.26
TRIO-206ENST00000504606 GOLGB1Q14789 3259 aaKnown RBP13.42□□□□□ -0.26
TRIO-206ENST00000504606 SIPA1L1O43166 1804 aa13.41□□□□□ -0.26
TRIO-206ENST00000504606 ORC4O43929 436 aa13.41□□□□□ -0.26
TRIO-206ENST00000504606 KDM4AO75164 1064 aa13.41□□□□□ -0.26
TRIO-206ENST00000504606 MCM5P33992 734 aa13.41□□□□□ -0.26
TRIO-206ENST00000504606 CDK8P49336 464 aa13.41□□□□□ -0.26
TRIO-206ENST00000504606 RASA3Q14644 834 aa13.41□□□□□ -0.26
TRIO-206ENST00000504606 USP50Q70EL3 339 aaPredicted RBP13.41□□□□□ -0.26
TRIO-206ENST00000504606 CYB5R4Q7L1T6 521 aa13.41□□□□□ -0.26
TRIO-206ENST00000504606 CHST3Q7LGC8 479 aa13.41□□□□□ -0.26
TRIO-206ENST00000504606 CRACR2BQ8N4Y2 399 aaPredicted RBP13.41□□□□□ -0.26
TRIO-206ENST00000504606 NKX2-3Q8TAU0 364 aa13.41□□□□□ -0.26
TRIO-206ENST00000504606 ESR2Q92731 530 aa13.41□□□□□ -0.26
TRIO-206ENST00000504606 TTC14Q96N46 770 aa13.41□□□□□ -0.26
TRIO-206ENST00000504606 CSRNP1Q96S65 589 aa13.41□□□□□ -0.26
TRIO-206ENST00000504606 TRIM34Q9BYJ4 488 aa13.41□□□□□ -0.26
TRIO-206ENST00000504606 TMEM39BQ9GZU3 492 aa13.41□□□□□ -0.26
TRIO-206ENST00000504606 EHD4Q9H223 541 aa13.41□□□□□ -0.26
TRIO-206ENST00000504606 MKNK2Q9HBH9 465 aa13.41□□□□□ -0.26
TRIO-206ENST00000504606 ZNF287Q9HBT7 754 aa13.41□□□□□ -0.26
TRIO-206ENST00000504606 PI4KBQ9UBF8 816 aa13.41□□□□□ -0.26
TRIO-206ENST00000504606 SERPINB13Q9UIV8 391 aa13.41□□□□□ -0.26
TRIO-206ENST00000504606 PRC1O43663 620 aa13.4□□□□□ -0.26
TRIO-206ENST00000504606 RANBP6O60518 1105 aaKnown RBP13.4□□□□□ -0.26
TRIO-206ENST00000504606 CD2BP2O95400 341 aaKnown RBP13.4□□□□□ -0.26
TRIO-206ENST00000504606 AK2P54819 239 aa13.4□□□□□ -0.26
TRIO-206ENST00000504606 FGD1P98174 961 aa13.4□□□□□ -0.26
TRIO-206ENST00000504606 EXOSC10Q01780 885 aaKnown RBP13.4□□□□□ -0.26
TRIO-206ENST00000504606 GABPAQ06546 454 aa13.4□□□□□ -0.26
TRIO-206ENST00000504606 FOXP4Q8IVH2 680 aaPredicted RBP13.4□□□□□ -0.26
TRIO-206ENST00000504606 HSCBQ8IWL3 235 aa13.4□□□□□ -0.26
TRIO-206ENST00000504606 ZNF444Q8N0Y2 327 aaPredicted RBP13.4□□□□□ -0.26
TRIO-206ENST00000504606 IL27Q8NEV9 243 aa13.4□□□□□ -0.26
TRIO-206ENST00000504606 SNX21Q969T3 373 aa13.4□□□□□ -0.26
TRIO-206ENST00000504606 LRRC2Q9BYS8 371 aa13.4□□□□□ -0.26
TRIO-206ENST00000504606 TAF1DQ9H5J8 278 aaPredicted RBP13.4□□□□□ -0.26
TRIO-206ENST00000504606 SWAP70Q9UH65 585 aa13.4□□□□□ -0.26
TRIO-206ENST00000504606 TSPY2A6NKD2 308 aa13.39□□□□□ -0.27
TRIO-206ENST00000504606 FAM196BA6NMK8 535 aa13.39□□□□□ -0.27
TRIO-206ENST00000504606 POTECB2RU33 542 aa13.39□□□□□ -0.27
TRIO-206ENST00000504606 SLURP2P0DP57 97 aa13.39□□□□□ -0.27
TRIO-206ENST00000504606 ANTXR2P58335 489 aa13.39□□□□□ -0.27
TRIO-206ENST00000504606 BECN1Q14457 450 aa13.39□□□□□ -0.27
TRIO-206ENST00000504606 Q6ZUG5 572 aa13.39□□□□□ -0.27
TRIO-206ENST00000504606 NOL8Q76FK4 1167 aaKnown RBP13.39□□□□□ -0.27
TRIO-206ENST00000504606 DCPSQ96C86 337 aaKnown RBP13.39□□□□□ -0.27
TRIO-206ENST00000504606 DEFB129Q9H1M3 183 aa13.39□□□□□ -0.27
TRIO-206ENST00000504606 ZSWIM5Q9P217 1185 aa13.39□□□□□ -0.27
TRIO-206ENST00000504606 MYH8P13535 1937 aa13.39□□□□□ -0.27
TRIO-206ENST00000504606 WDR19Q8NEZ3 1342 aa13.39□□□□□ -0.27
TRIO-206ENST00000504606 PITPNM2Q9BZ72 1349 aa13.39□□□□□ -0.27
TRIO-206ENST00000504606 RASA1P20936 1047 aa13.38□□□□□ -0.27
TRIO-206ENST00000504606 NT5C2P49902 561 aa13.38□□□□□ -0.27
TRIO-206ENST00000504606 EAPPQ56P03 285 aaPredicted RBP13.38□□□□□ -0.27
TRIO-206ENST00000504606 FAM47AQ5JRC9 791 aa13.38□□□□□ -0.27
TRIO-206ENST00000504606 CDAN1Q8IWY9 1227 aa13.38□□□□□ -0.27
TRIO-206ENST00000504606 TMEM87BQ96K49 555 aa13.38□□□□□ -0.27
TRIO-206ENST00000504606 ZKSCAN3Q9BRR0 538 aa13.38□□□□□ -0.27
TRIO-206ENST00000504606 TBC1D2Q9BYX2 928 aa13.38□□□□□ -0.27
TRIO-206ENST00000504606 DNAJC18Q9H819 358 aa13.38□□□□□ -0.27
TRIO-206ENST00000504606 PGAP2Q9UHJ9 254 aa13.38□□□□□ -0.27
TRIO-206ENST00000504606 ERICH2A1L162 156 aa13.37□□□□□ -0.27
TRIO-206ENST00000504606 IFIT3O14879 490 aaKnown RBP13.37□□□□□ -0.27
TRIO-206ENST00000504606 TSPY3P0CV98 308 aa13.37□□□□□ -0.27
TRIO-206ENST00000504606 TSPY8P0CW00 308 aa13.37□□□□□ -0.27
TRIO-206ENST00000504606 SHMT1P34896 483 aa13.37□□□□□ -0.27
TRIO-206ENST00000504606 MCM2P49736 904 aa13.37□□□□□ -0.27
TRIO-206ENST00000504606 TFAP4Q01664 338 aa13.37□□□□□ -0.27
TRIO-206ENST00000504606 TOB2Q14106 344 aaPredicted RBP13.37□□□□□ -0.27
TRIO-206ENST00000504606 SART3Q15020 963 aaKnown RBP13.37□□□□□ -0.27
TRIO-206ENST00000504606 ANKRD1Q15327 319 aa13.37□□□□□ -0.27
TRIO-206ENST00000504606 PNMA8AQ86V59 439 aaPredicted RBP13.37□□□□□ -0.27
TRIO-206ENST00000504606 IQCA1Q86XH1 822 aa13.37□□□□□ -0.27
TRIO-206ENST00000504606 BRF1Q92994 677 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms