RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 KCNF1Q9H3M0 494 aa9.68□□□□□ -0.86
UBE2D3-217ENST00000504211 C7orf69Q9H7B7 122 aa9.68□□□□□ -0.86
UBE2D3-217ENST00000504211 CCSER2Q9H7U1 834 aa9.68□□□□□ -0.86
UBE2D3-217ENST00000504211 UBP1Q9NZI7 540 aa9.68□□□□□ -0.86
UBE2D3-217ENST00000504211 PRR36Q9H6K5 1346 aa9.67□□□□□ -0.86
UBE2D3-217ENST00000504211 FAM95CA0A1B0GW59 222 aa9.67□□□□□ -0.86
UBE2D3-217ENST00000504211 PRAMEF27A3QJZ7 478 aa9.67□□□□□ -0.86
UBE2D3-217ENST00000504211 DYRK3O43781 588 aa9.67□□□□□ -0.86
UBE2D3-217ENST00000504211 GJA8P48165 433 aa9.67□□□□□ -0.86
UBE2D3-217ENST00000504211 APOBRQ0VD83 1088 aa9.67□□□□□ -0.86
UBE2D3-217ENST00000504211 CWF19L2Q2TBE0 894 aaKnown RBP9.67□□□□□ -0.86
UBE2D3-217ENST00000504211 SEZ6L2Q6UXD5 910 aa9.67□□□□□ -0.86
UBE2D3-217ENST00000504211 STOML1Q9UBI4 398 aa9.67□□□□□ -0.86
UBE2D3-217ENST00000504211 POLR3KQ9Y2Y1 108 aaPredicted RBP9.67□□□□□ -0.86
UBE2D3-217ENST00000504211 NFICP08651 508 aa9.66□□□□□ -0.86
UBE2D3-217ENST00000504211 RXRBP28702 533 aa9.66□□□□□ -0.86
UBE2D3-217ENST00000504211 PAK2Q13177 524 aa9.66□□□□□ -0.86
UBE2D3-217ENST00000504211 PAOXQ6QHF9 649 aa9.66□□□□□ -0.86
UBE2D3-217ENST00000504211 SLITRK4Q8IW52 837 aa9.66□□□□□ -0.86
UBE2D3-217ENST00000504211 KCT2Q8NC54 265 aa9.66□□□□□ -0.86
UBE2D3-217ENST00000504211 RASGRP4Q8TDF6 673 aa9.66□□□□□ -0.86
UBE2D3-217ENST00000504211 ACBD3Q9H3P7 528 aa9.66□□□□□ -0.86
UBE2D3-217ENST00000504211 PICK1Q9NRD5 415 aa9.66□□□□□ -0.86
UBE2D3-217ENST00000504211 TLR3O15455 904 aaKnown RBP9.65□□□□□ -0.86
UBE2D3-217ENST00000504211 GRK4P32298 578 aa9.65□□□□□ -0.86
UBE2D3-217ENST00000504211 PDE4BQ07343 736 aa9.65□□□□□ -0.86
UBE2D3-217ENST00000504211 ZNF507Q8TCN5 953 aa9.65□□□□□ -0.86
UBE2D3-217ENST00000504211 ADAM30Q9UKF2 790 aa9.65□□□□□ -0.86
UBE2D3-217ENST00000504211 PCOLCE2Q9UKZ9 415 aa9.65□□□□□ -0.86
UBE2D3-217ENST00000504211 DAGLAQ9Y4D2 1042 aa9.65□□□□□ -0.86
UBE2D3-217ENST00000504211 HMX2A2RU54 273 aa9.64□□□□□ -0.87
UBE2D3-217ENST00000504211 RNGTTO60942 597 aaKnown RBP9.64□□□□□ -0.87
UBE2D3-217ENST00000504211 CAP2P40123 477 aa9.64□□□□□ -0.87
UBE2D3-217ENST00000504211 ETF1P62495 437 aaKnown RBP9.64□□□□□ -0.87
UBE2D3-217ENST00000504211 UBE3DQ7Z6J8 389 aa9.64□□□□□ -0.87
UBE2D3-217ENST00000504211 NKD1Q969G9 470 aa9.64□□□□□ -0.87
UBE2D3-217ENST00000504211 GPRASP2Q96D09 838 aa9.64□□□□□ -0.87
UBE2D3-217ENST00000504211 SPATA32Q96LK8 384 aa9.64□□□□□ -0.87
UBE2D3-217ENST00000504211 PRKAG2Q9UGJ0 569 aa9.64□□□□□ -0.87
UBE2D3-217ENST00000504211 DYNC1LI2O43237 492 aaPredicted RBP9.63□□□□□ -0.87
UBE2D3-217ENST00000504211 SEZ6Q53EL9 994 aa9.63□□□□□ -0.87
UBE2D3-217ENST00000504211 TMEM201Q5SNT2 666 aa9.63□□□□□ -0.87
UBE2D3-217ENST00000504211 RNF43Q68DV7 783 aa9.63□□□□□ -0.87
UBE2D3-217ENST00000504211 REXO1Q8N1G1 1221 aaKnown RBP9.63□□□□□ -0.87
UBE2D3-217ENST00000504211 FBRSQ9HAH7 460 aa9.63□□□□□ -0.87
UBE2D3-217ENST00000504211 BRMS1Q9HCU9 246 aa9.63□□□□□ -0.87
UBE2D3-217ENST00000504211 C1GALT1Q9NS00 363 aa9.63□□□□□ -0.87
UBE2D3-217ENST00000504211 CORINQ9Y5Q5 1042 aa9.63□□□□□ -0.87
UBE2D3-217ENST00000504211 GSC2O15499 205 aa9.62□□□□□ -0.87
UBE2D3-217ENST00000504211 ATE1O95260 518 aa9.62□□□□□ -0.87
UBE2D3-217ENST00000504211 PGRP06401 933 aa9.62□□□□□ -0.87
UBE2D3-217ENST00000504211 NFKBIBQ15653 356 aa9.62□□□□□ -0.87
UBE2D3-217ENST00000504211 SLC51AQ86UW1 340 aa9.62□□□□□ -0.87
UBE2D3-217ENST00000504211 HID1Q8IV36 788 aa9.62□□□□□ -0.87
UBE2D3-217ENST00000504211 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.62□□□□□ -0.87
UBE2D3-217ENST00000504211 FURINP09958 794 aa9.61□□□□□ -0.87
UBE2D3-217ENST00000504211 FSTP19883 344 aa9.61□□□□□ -0.87
UBE2D3-217ENST00000504211 TNNI2P48788 182 aa9.61□□□□□ -0.87
UBE2D3-217ENST00000504211 COL9A2Q14055 689 aaPredicted RBP9.61□□□□□ -0.87
UBE2D3-217ENST00000504211 SLBPQ14493 270 aaKnown RBP eCLIP9.61□□□□□ -0.87
UBE2D3-217ENST00000504211 CDC37L1Q7L3B6 337 aa9.61□□□□□ -0.87
UBE2D3-217ENST00000504211 MRPL41Q8IXM3 137 aaKnown RBP9.61□□□□□ -0.87
UBE2D3-217ENST00000504211 GATA6Q92908 595 aa9.61□□□□□ -0.87
UBE2D3-217ENST00000504211 PSMG3-AS1Q96PY0 264 aa9.61□□□□□ -0.87
UBE2D3-217ENST00000504211 DBNDD2Q9BQY9 259 aa9.61□□□□□ -0.87
UBE2D3-217ENST00000504211 TINF2Q9BSI4 451 aa9.61□□□□□ -0.87
UBE2D3-217ENST00000504211 EHMT1Q9H9B1 1298 aa9.61□□□□□ -0.87
UBE2D3-217ENST00000504211 SSU72Q9NP77 194 aaKnown RBP9.61□□□□□ -0.87
UBE2D3-217ENST00000504211 INPP5FQ9Y2H2 1132 aa9.61□□□□□ -0.87
UBE2D3-217ENST00000504211 GRIN3BO60391 1043 aa9.6□□□□□ -0.87
UBE2D3-217ENST00000504211 HTR3BO95264 441 aa9.6□□□□□ -0.87
UBE2D3-217ENST00000504211 ZNF165P49910 485 aa9.6□□□□□ -0.87
UBE2D3-217ENST00000504211 NFIAQ12857 509 aa9.6□□□□□ -0.87
UBE2D3-217ENST00000504211 NKG7Q16617 165 aa9.6□□□□□ -0.87
UBE2D3-217ENST00000504211 TJP2Q9UDY2 1190 aa9.6□□□□□ -0.87
UBE2D3-217ENST00000504211 PCDHB14Q9Y5E9 798 aa9.6□□□□□ -0.87
UBE2D3-217ENST00000504211 LRIG2O94898 1065 aa9.59□□□□□ -0.87
UBE2D3-217ENST00000504211 IGLV1-40P01703 118 aa9.59□□□□□ -0.87
UBE2D3-217ENST00000504211 PLCG1P19174 1290 aa9.59□□□□□ -0.87
UBE2D3-217ENST00000504211 SOX9P48436 509 aa9.59□□□□□ -0.87
UBE2D3-217ENST00000504211 ARMCX6Q7L4S7 300 aa9.59□□□□□ -0.87
UBE2D3-217ENST00000504211 ZAR1Q86SH2 424 aa9.59□□□□□ -0.87
UBE2D3-217ENST00000504211 MCATQ8IVS2 390 aaKnown RBP9.59□□□□□ -0.87
UBE2D3-217ENST00000504211 ACSF2Q96CM8 615 aaPredicted RBP9.59□□□□□ -0.87
UBE2D3-217ENST00000504211 REV1Q9UBZ9 1251 aa9.59□□□□□ -0.87
UBE2D3-217ENST00000504211 ZC3H6P61129 1189 aaKnown RBP9.58□□□□□ -0.88
UBE2D3-217ENST00000504211 SLC6A19Q695T7 634 aa9.58□□□□□ -0.88
UBE2D3-217ENST00000504211 TMEM87BQ96K49 555 aa9.58□□□□□ -0.88
UBE2D3-217ENST00000504211 CST3P01034 146 aaPredicted RBP9.57□□□□□ -0.88
UBE2D3-217ENST00000504211 ADMP35318 185 aa9.57□□□□□ -0.88
UBE2D3-217ENST00000504211 CLCQ05315 142 aa9.57□□□□□ -0.88
UBE2D3-217ENST00000504211 CDK5R2Q13319 367 aa9.57□□□□□ -0.88
UBE2D3-217ENST00000504211 MFSD14AQ96MC6 490 aa9.57□□□□□ -0.88
UBE2D3-217ENST00000504211 C8orf37Q96NL8 207 aa9.57□□□□□ -0.88
UBE2D3-217ENST00000504211 FOXQ1Q9C009 403 aa9.57□□□□□ -0.88
UBE2D3-217ENST00000504211 LGR6Q9HBX8 967 aa9.57□□□□□ -0.88
UBE2D3-217ENST00000504211 GINM1Q9NU53 330 aa9.57□□□□□ -0.88
UBE2D3-217ENST00000504211 GNL2Q13823 731 aaKnown RBP9.56□□□□□ -0.88
UBE2D3-217ENST00000504211 PRAMEF13Q5VWM6 474 aa9.56□□□□□ -0.88
UBE2D3-217ENST00000504211 GK5Q6ZS86 529 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms