RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 AKNAD1Q5T1N1 836 aa24.2■■□□□ 1.47
CDC42SE2-206ENST00000503291 TEPSINQ96N21 525 aa24.2■■□□□ 1.47
CDC42SE2-206ENST00000503291 CLEC11AQ9Y240 323 aa24.2■■□□□ 1.47
CDC42SE2-206ENST00000503291 TACC3Q9Y6A5 838 aa24.2■■□□□ 1.47
CDC42SE2-206ENST00000503291 LAMA4Q16363 1823 aa24.2■■□□□ 1.46
CDC42SE2-206ENST00000503291 MFSD6Q6ZSS7 791 aa24.2■■□□□ 1.46
CDC42SE2-206ENST00000503291 SULF1Q8IWU6 871 aa24.2■■□□□ 1.46
CDC42SE2-206ENST00000503291 SERPINB13Q9UIV8 391 aa24.2■■□□□ 1.46
CDC42SE2-206ENST00000503291 LAMB1P07942 1786 aa24.19■■□□□ 1.46
CDC42SE2-206ENST00000503291 KRT32Q14532 448 aa24.19■■□□□ 1.46
CDC42SE2-206ENST00000503291 STAG1Q8WVM7 1258 aa24.19■■□□□ 1.46
CDC42SE2-206ENST00000503291 KIF2CQ99661 725 aa24.19■■□□□ 1.46
CDC42SE2-206ENST00000503291 GABPAQ06546 454 aa24.18■■□□□ 1.46
CDC42SE2-206ENST00000503291 KRT26Q7Z3Y9 468 aa24.18■■□□□ 1.46
CDC42SE2-206ENST00000503291 FOXP4Q8IVH2 680 aaPredicted RBP24.18■■□□□ 1.46
CDC42SE2-206ENST00000503291 EHD4Q9H223 541 aa24.18■■□□□ 1.46
CDC42SE2-206ENST00000503291 RNF41Q9H4P4 317 aaPredicted RBP24.18■■□□□ 1.46
CDC42SE2-206ENST00000503291 ROBO3Q96MS0 1386 aa24.18■■□□□ 1.46
CDC42SE2-206ENST00000503291 SLURP2P0DP57 97 aa24.18■■□□□ 1.46
CDC42SE2-206ENST00000503291 PRAMEF18Q5VWM3 479 aa24.18■■□□□ 1.46
CDC42SE2-206ENST00000503291 IL17RAQ96F46 866 aa24.18■■□□□ 1.46
CDC42SE2-206ENST00000503291 PPP2R3BQ9Y5P8 575 aa24.18■■□□□ 1.46
CDC42SE2-206ENST00000503291 FGRP09769 529 aa24.17■■□□□ 1.46
CDC42SE2-206ENST00000503291 PDE4BQ07343 736 aa24.17■■□□□ 1.46
CDC42SE2-206ENST00000503291 C16orf86Q6ZW13 317 aa24.17■■□□□ 1.46
CDC42SE2-206ENST00000503291 SLC44A5Q8NCS7 719 aa24.17■■□□□ 1.46
CDC42SE2-206ENST00000503291 CRACR2BQ8N4Y2 399 aaPredicted RBP24.17■■□□□ 1.46
CDC42SE2-206ENST00000503291 JAKMIP1Q96N16 626 aaKnown RBP24.17■■□□□ 1.46
CDC42SE2-206ENST00000503291 ADM5C9JUS6 153 aa24.16■■□□□ 1.46
CDC42SE2-206ENST00000503291 PRDM1O75626 825 aa24.16■■□□□ 1.46
CDC42SE2-206ENST00000503291 PCP11498 1178 aaKnown RBP24.16■■□□□ 1.46
CDC42SE2-206ENST00000503291 CDK8P49336 464 aa24.16■■□□□ 1.46
CDC42SE2-206ENST00000503291 TRDNQ13061 729 aa24.16■■□□□ 1.46
CDC42SE2-206ENST00000503291 NBPF12Q5TAG4 269 aaPredicted RBP24.16■■□□□ 1.46
CDC42SE2-206ENST00000503291 METTL16Q86W50 562 aaKnown RBP24.16■■□□□ 1.46
CDC42SE2-206ENST00000503291 NEK1Q96PY6 1258 aa24.16■■□□□ 1.46
CDC42SE2-206ENST00000503291 GPBP1L1Q9HC44 474 aaPredicted RBP24.16■■□□□ 1.46
CDC42SE2-206ENST00000503291 TOMM22Q9NS69 142 aa24.16■■□□□ 1.46
CDC42SE2-206ENST00000503291 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.16■■□□□ 1.46
CDC42SE2-206ENST00000503291 NEDD4P46934 1319 aa24.16■■□□□ 1.46
CDC42SE2-206ENST00000503291 RRP12Q5JTH9 1297 aaKnown RBP24.15■■□□□ 1.46
CDC42SE2-206ENST00000503291 DLK2Q6UY11 383 aa24.15■■□□□ 1.46
CDC42SE2-206ENST00000503291 USP48Q86UV5 1035 aa24.15■■□□□ 1.46
CDC42SE2-206ENST00000503291 NCOA7Q8NI08 942 aa24.15■■□□□ 1.46
CDC42SE2-206ENST00000503291 MKNK2Q9HBH9 465 aa24.15■■□□□ 1.46
CDC42SE2-206ENST00000503291 SIPA1L1O43166 1804 aa24.15■■□□□ 1.46
CDC42SE2-206ENST00000503291 FAM196BA6NMK8 535 aa24.15■■□□□ 1.46
CDC42SE2-206ENST00000503291 PSMA5P28066 241 aa24.15■■□□□ 1.46
CDC42SE2-206ENST00000503291 COL9A3Q14050 684 aaPredicted RBP24.15■■□□□ 1.46
CDC42SE2-206ENST00000503291 CDC37L1Q7L3B6 337 aa24.15■■□□□ 1.46
CDC42SE2-206ENST00000503291 LDHDQ86WU2 507 aa24.15■■□□□ 1.46
CDC42SE2-206ENST00000503291 DNAJC18Q9H819 358 aa24.15■■□□□ 1.46
CDC42SE2-206ENST00000503291 CNNM2Q9H8M5 875 aa24.15■■□□□ 1.46
CDC42SE2-206ENST00000503291 ZNF287Q9HBT7 754 aa24.15■■□□□ 1.46
CDC42SE2-206ENST00000503291 MAP1SQ66K74 1059 aaPredicted RBP24.14■■□□□ 1.45
CDC42SE2-206ENST00000503291 MIGA2Q7L4E1 593 aa24.14■■□□□ 1.45
CDC42SE2-206ENST00000503291 NKX2-3Q8TAU0 364 aa24.14■■□□□ 1.45
CDC42SE2-206ENST00000503291 TRIM34Q9BYJ4 488 aa24.14■■□□□ 1.45
CDC42SE2-206ENST00000503291 TM6SF1Q9BZW5 370 aa24.14■■□□□ 1.45
CDC42SE2-206ENST00000503291 KRT23Q9C075 422 aa24.14■■□□□ 1.45
CDC42SE2-206ENST00000503291 SWAP70Q9UH65 585 aa24.14■■□□□ 1.45
CDC42SE2-206ENST00000503291 HERC5Q9UII4 1024 aaKnown RBP24.14■■□□□ 1.45
CDC42SE2-206ENST00000503291 B4E1Z4 1266 aa24.13■■□□□ 1.45
CDC42SE2-206ENST00000503291 ORC4O43929 436 aa24.13■■□□□ 1.45
CDC42SE2-206ENST00000503291 CASTP20810 708 aaKnown RBP24.13■■□□□ 1.45
CDC42SE2-206ENST00000503291 RALYLQ86SE5 291 aaKnown RBP24.13■■□□□ 1.45
CDC42SE2-206ENST00000503291 GLIS2Q9BZE0 524 aaPredicted RBP24.13■■□□□ 1.45
CDC42SE2-206ENST00000503291 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.13■■□□□ 1.45
CDC42SE2-206ENST00000503291 TAOK2Q9UL54 1235 aa24.13■■□□□ 1.45
CDC42SE2-206ENST00000503291 TBC1D12O60347 775 aa24.12■■□□□ 1.45
CDC42SE2-206ENST00000503291 CPA1P15085 419 aa24.12■■□□□ 1.45
CDC42SE2-206ENST00000503291 SHMT1P34896 483 aa24.12■■□□□ 1.45
CDC42SE2-206ENST00000503291 MAP3K10Q02779 954 aa24.12■■□□□ 1.45
CDC42SE2-206ENST00000503291 UPF3BQ9BZI7 483 aaKnown RBP24.12■■□□□ 1.45
CDC42SE2-206ENST00000503291 ZSWIM6Q9HCJ5 1215 aa24.12■■□□□ 1.45
CDC42SE2-206ENST00000503291 RANBP6O60518 1105 aaKnown RBP24.11■■□□□ 1.45
CDC42SE2-206ENST00000503291 KDM4AO75164 1064 aa24.11■■□□□ 1.45
CDC42SE2-206ENST00000503291 SUPT20HL1Q3ZLR7 823 aa24.11■■□□□ 1.45
CDC42SE2-206ENST00000503291 BLOC1S2Q6QNY1 142 aa24.11■■□□□ 1.45
CDC42SE2-206ENST00000503291 ZNF444Q8N0Y2 327 aaPredicted RBP24.11■■□□□ 1.45
CDC42SE2-206ENST00000503291 ESR2Q92731 530 aa24.11■■□□□ 1.45
CDC42SE2-206ENST00000503291 ZSWIM5Q9P217 1185 aa24.11■■□□□ 1.45
CDC42SE2-206ENST00000503291 HMGB1P09429 215 aaKnown RBP24.11■■□□□ 1.45
CDC42SE2-206ENST00000503291 RASA1P20936 1047 aa24.11■■□□□ 1.45
CDC42SE2-206ENST00000503291 MB21D2Q8IYB1 491 aaPredicted RBP24.11■■□□□ 1.45
CDC42SE2-206ENST00000503291 TSHZ2Q9NRE2 1034 aa24.11■■□□□ 1.45
CDC42SE2-206ENST00000503291 TATDN1Q6P1N9 297 aa24.1■■□□□ 1.45
CDC42SE2-206ENST00000503291 RUFY3Q7L099 469 aa24.1■■□□□ 1.45
CDC42SE2-206ENST00000503291 HOOK2Q96ED9 719 aa24.1■■□□□ 1.45
CDC42SE2-206ENST00000503291 YY1P25490 414 aa24.1■■□□□ 1.45
CDC42SE2-206ENST00000503291 DHX32Q7L7V1 743 aaKnown RBP24.1■■□□□ 1.45
CDC42SE2-206ENST00000503291 CYP46A1Q9Y6A2 500 aa24.1■■□□□ 1.45
CDC42SE2-206ENST00000503291 RABEP1Q15276 862 aa24.09■■□□□ 1.45
CDC42SE2-206ENST00000503291 FAM47AQ5JRC9 791 aa24.09■■□□□ 1.45
CDC42SE2-206ENST00000503291 CYB5R4Q7L1T6 521 aa24.09■■□□□ 1.45
CDC42SE2-206ENST00000503291 CHST3Q7LGC8 479 aa24.09■■□□□ 1.45
CDC42SE2-206ENST00000503291 CDCA5Q96FF9 252 aa24.09■■□□□ 1.45
CDC42SE2-206ENST00000503291 RPS6KB1P23443 525 aa24.08■■□□□ 1.45
CDC42SE2-206ENST00000503291 MCM5P33992 734 aa24.08■■□□□ 1.45
CDC42SE2-206ENST00000503291 NEK4P51957 841 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms