RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 ELF2Q15723 593 aa5.93□□□□□ -1.46
CLDND1-208ENST00000503004 CCDC144BQ3MJ40 725 aa5.93□□□□□ -1.46
CLDND1-208ENST00000503004 RPAINQ86UA6 219 aa5.93□□□□□ -1.46
CLDND1-208ENST00000503004 TXLNBQ8N3L3 684 aa5.93□□□□□ -1.46
CLDND1-208ENST00000503004 FBXL16Q8N461 479 aa5.93□□□□□ -1.46
CLDND1-208ENST00000503004 MAGEB6Q8N7X4 407 aa5.93□□□□□ -1.46
CLDND1-208ENST00000503004 JMYQ8N9B5 988 aa5.93□□□□□ -1.46
CLDND1-208ENST00000503004 LINC00301Q8NCQ3 95 aa5.93□□□□□ -1.46
CLDND1-208ENST00000503004 TDRD7Q8NHU6 1098 aaKnown RBP5.93□□□□□ -1.46
CLDND1-208ENST00000503004 SDF4Q9BRK5 362 aa5.93□□□□□ -1.46
CLDND1-208ENST00000503004 DEF6Q9H4E7 631 aa5.93□□□□□ -1.46
CLDND1-208ENST00000503004 RBM28Q9NW13 759 aaKnown RBP5.93□□□□□ -1.46
CLDND1-208ENST00000503004 ZNF215Q9UL58 517 aaPredicted RBP5.93□□□□□ -1.46
CLDND1-208ENST00000503004 ANGEL1Q9UNK9 670 aaKnown RBP5.93□□□□□ -1.46
CLDND1-208ENST00000503004 ITGB4P16144 1822 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 SPEF2Q9C093 1822 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 GOLGA6L19H0YKK7 550 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 PRKAB2O43741 272 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 ARID4AP29374 1257 aaPredicted RBP5.92□□□□□ -1.46
CLDND1-208ENST00000503004 IL6STP40189 918 aaPredicted RBP5.92□□□□□ -1.46
CLDND1-208ENST00000503004 METAP2P50579 478 aaKnown RBP eCLIP5.92□□□□□ -1.46
CLDND1-208ENST00000503004 BCAMP50895 628 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 ZNF75DP51815 510 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 RBM5P52756 815 aaKnown RBP eCLIP5.92□□□□□ -1.46
CLDND1-208ENST00000503004 CTDSPL2Q05D32 466 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 PUM3Q15397 648 aaKnown RBP5.92□□□□□ -1.46
CLDND1-208ENST00000503004 ZSCAN26Q16670 478 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 TPD52L1Q16890 204 aaPredicted RBP5.92□□□□□ -1.46
CLDND1-208ENST00000503004 MYSM1Q5VVJ2 828 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 PLA2G4DQ86XP0 818 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 ZNF34Q8IZ26 560 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 FMR1NBQ8N0W7 255 aaPredicted RBP5.92□□□□□ -1.46
CLDND1-208ENST00000503004 SPATA5Q8NB90 893 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 LPIN2Q92539 896 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 MRPS27Q92552 414 aaKnown RBP5.92□□□□□ -1.46
CLDND1-208ENST00000503004 SMARCE1Q969G3 411 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 STRBPQ96SI9 672 aaKnown RBP5.92□□□□□ -1.46
CLDND1-208ENST00000503004 MPHOSPH8Q99549 860 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 ZKSCAN3Q9BRR0 538 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 ARMT1Q9H993 441 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 EPB41L4AQ9HCS5 686 aaPredicted RBP5.92□□□□□ -1.46
CLDND1-208ENST00000503004 CLIP2Q9UDT6 1046 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 SLIT2O94813 1529 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 TCRBV5S4A2TA0A5A2 114 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 BECN2A8MW95 431 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 SMIM22K7EJ46 135 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 BIN1O00499 593 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 MPHOSPH10O00566 681 aaKnown RBP5.92□□□□□ -1.46
CLDND1-208ENST00000503004 MBD4O95243 580 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 PLA2G4AP47712 749 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 EIF5P55010 431 aaKnown RBP5.92□□□□□ -1.46
CLDND1-208ENST00000503004 KCNQ4P56696 695 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 SETQ01105 290 aaPredicted RBP5.92□□□□□ -1.46
CLDND1-208ENST00000503004 KIF23Q02241 960 aaPredicted RBP5.92□□□□□ -1.46
CLDND1-208ENST00000503004 TTF1Q15361 905 aaPredicted RBP5.92□□□□□ -1.46
CLDND1-208ENST00000503004 UBE3CQ15386 1083 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 RRP12Q5JTH9 1297 aaKnown RBP5.92□□□□□ -1.46
CLDND1-208ENST00000503004 ADALQ6DHV7 355 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 MCTP2Q6DN12 878 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 ISM2Q6H9L7 571 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 ZSCAN25Q6NSZ9 544 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 APOA5Q6Q788 366 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 SMIM5Q71RC9 77 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 SUGP1Q8IWZ8 645 aaKnown RBP5.92□□□□□ -1.46
CLDND1-208ENST00000503004 GOLGA6L1Q8N7Z2 621 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 MIGA1Q8NAN2 632 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 ITFG2Q969R8 447 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 BSDC1Q9NW68 430 aaPredicted RBP5.92□□□□□ -1.46
CLDND1-208ENST00000503004 RTEL1Q9NZ71 1219 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 TACC3Q9Y6A5 838 aa5.92□□□□□ -1.46
CLDND1-208ENST00000503004 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.91□□□□□ -1.46
CLDND1-208ENST00000503004 SPTLC2O15270 562 aa5.91□□□□□ -1.46
CLDND1-208ENST00000503004 FGFR2P21802 821 aa5.91□□□□□ -1.46
CLDND1-208ENST00000503004 SSR1P43307 286 aaKnown RBP5.91□□□□□ -1.46
CLDND1-208ENST00000503004 CRKLP46109 303 aaKnown RBP5.91□□□□□ -1.46
CLDND1-208ENST00000503004 STX1AQ16623 288 aa5.91□□□□□ -1.46
CLDND1-208ENST00000503004 DPCR1Q3MIW9 517 aa5.91□□□□□ -1.46
CLDND1-208ENST00000503004 INTS5Q6P9B9 1019 aaKnown RBP5.91□□□□□ -1.46
CLDND1-208ENST00000503004 DNAJC14Q6Y2X3 702 aaPredicted RBP5.91□□□□□ -1.46
CLDND1-208ENST00000503004 SYNE3Q6ZMZ3 975 aa5.91□□□□□ -1.46
CLDND1-208ENST00000503004 NFXL1Q6ZNB6 911 aa5.91□□□□□ -1.46
CLDND1-208ENST00000503004 FILIP1Q7Z7B0 1213 aa5.91□□□□□ -1.46
CLDND1-208ENST00000503004 VPS37DQ86XT2 251 aa5.91□□□□□ -1.46
CLDND1-208ENST00000503004 CMTR1Q8N1G2 835 aaKnown RBP5.91□□□□□ -1.46
CLDND1-208ENST00000503004 CACTINQ8WUQ7 758 aaKnown RBP5.91□□□□□ -1.46
CLDND1-208ENST00000503004 ALG1Q9BT22 464 aa5.91□□□□□ -1.46
CLDND1-208ENST00000503004 NAPBQ9H115 298 aa5.91□□□□□ -1.46
CLDND1-208ENST00000503004 ZCCHC17Q9NP64 241 aaKnown RBP5.91□□□□□ -1.46
CLDND1-208ENST00000503004 ZSWIM5Q9P217 1185 aa5.91□□□□□ -1.46
CLDND1-208ENST00000503004 RPS6KL1Q9Y6S9 549 aa5.91□□□□□ -1.46
CLDND1-208ENST00000503004 DISP2A7MBM2 1401 aa5.91□□□□□ -1.46
CLDND1-208ENST00000503004 ABCC12Q96J65 1359 aa5.91□□□□□ -1.46
CLDND1-208ENST00000503004 ERVV-1B6SEH8 477 aa5.91□□□□□ -1.46
CLDND1-208ENST00000503004 SH2B2O14492 632 aaPredicted RBP5.91□□□□□ -1.46
CLDND1-208ENST00000503004 WDHD1O75717 1129 aaPredicted RBP5.91□□□□□ -1.46
CLDND1-208ENST00000503004 SCP2P22307 547 aa5.91□□□□□ -1.46
CLDND1-208ENST00000503004 MAP2K2P36507 400 aa5.91□□□□□ -1.46
CLDND1-208ENST00000503004 ITPK1Q13572 414 aa5.91□□□□□ -1.46
CLDND1-208ENST00000503004 TTC19Q6DKK2 380 aaPredicted RBP5.91□□□□□ -1.46
CLDND1-208ENST00000503004 DHX40Q8IX18 779 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms