RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 LCE2BO14633 110 aa7.6□□□□□ -1.19
HMGB1P3-201ENST00000502802 TNFRSF10CO14798 259 aa7.6□□□□□ -1.19
HMGB1P3-201ENST00000502802 PGRP06401 933 aa7.6□□□□□ -1.19
HMGB1P3-201ENST00000502802 NLRP12P59046 1061 aa7.6□□□□□ -1.19
HMGB1P3-201ENST00000502802 ZC3H12AQ5D1E8 599 aaKnown RBP7.6□□□□□ -1.19
HMGB1P3-201ENST00000502802 CDCP2Q5VXM1 449 aa7.6□□□□□ -1.19
HMGB1P3-201ENST00000502802 UNC5AQ6ZN44 842 aa7.6□□□□□ -1.19
HMGB1P3-201ENST00000502802 NLRC3Q7RTR2 1065 aa7.6□□□□□ -1.19
HMGB1P3-201ENST00000502802 FILIP1Q7Z7B0 1213 aa7.6□□□□□ -1.19
HMGB1P3-201ENST00000502802 C12orf40Q86WS4 652 aa7.6□□□□□ -1.19
HMGB1P3-201ENST00000502802 JMYQ8N9B5 988 aa7.6□□□□□ -1.19
HMGB1P3-201ENST00000502802 GALNT6Q8NCL4 622 aa7.6□□□□□ -1.19
HMGB1P3-201ENST00000502802 GALNT11Q8NCW6 608 aa7.6□□□□□ -1.19
HMGB1P3-201ENST00000502802 ZCRB1Q8TBF4 217 aaKnown RBP7.6□□□□□ -1.19
HMGB1P3-201ENST00000502802 THAP3Q8WTV1 239 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P3-201ENST00000502802 ZNF669Q96BR6 464 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P3-201ENST00000502802 BRINP2Q9C0B6 783 aa7.6□□□□□ -1.19
HMGB1P3-201ENST00000502802 CNNM2Q9H8M5 875 aa7.6□□□□□ -1.19
HMGB1P3-201ENST00000502802 PRDM6Q9NQX0 595 aa7.6□□□□□ -1.19
HMGB1P3-201ENST00000502802 ADAM30Q9UKF2 790 aa7.6□□□□□ -1.19
HMGB1P3-201ENST00000502802 PRKAB1Q9Y478 270 aa7.6□□□□□ -1.19
HMGB1P3-201ENST00000502802 LOC100289279A0A1B0GTE1 492 aa7.59□□□□□ -1.19
HMGB1P3-201ENST00000502802 UPK3BL1B0FP48 263 aa7.59□□□□□ -1.19
HMGB1P3-201ENST00000502802 UPK3BL2E5RIL1 263 aa7.59□□□□□ -1.19
HMGB1P3-201ENST00000502802 DNAJA2O60884 412 aa7.59□□□□□ -1.19
HMGB1P3-201ENST00000502802 AOC2O75106 756 aa7.59□□□□□ -1.19
HMGB1P3-201ENST00000502802 ACRP10323 421 aa7.59□□□□□ -1.19
HMGB1P3-201ENST00000502802 GRK4P32298 578 aa7.59□□□□□ -1.19
HMGB1P3-201ENST00000502802 IGBP1P78318 339 aa7.59□□□□□ -1.19
HMGB1P3-201ENST00000502802 SQSTM1Q13501 440 aa7.59□□□□□ -1.19
HMGB1P3-201ENST00000502802 NCAPHQ15003 741 aa7.59□□□□□ -1.19
HMGB1P3-201ENST00000502802 ARSHQ5FYA8 562 aa7.59□□□□□ -1.19
HMGB1P3-201ENST00000502802 VHLLQ6RSH7 139 aa7.59□□□□□ -1.19
HMGB1P3-201ENST00000502802 ILDR2Q71H61 639 aa7.59□□□□□ -1.19
HMGB1P3-201ENST00000502802 SPATC1Q76KD6 591 aa7.59□□□□□ -1.19
HMGB1P3-201ENST00000502802 BTBD6Q96KE9 485 aa7.59□□□□□ -1.19
HMGB1P3-201ENST00000502802 WDR18Q9BV38 432 aa7.59□□□□□ -1.19
HMGB1P3-201ENST00000502802 PHAXQ9H814 394 aaKnown RBP7.59□□□□□ -1.19
HMGB1P3-201ENST00000502802 IFT57Q9NWB7 429 aa7.59□□□□□ -1.19
HMGB1P3-201ENST00000502802 PFDN2Q9UHV9 154 aa7.59□□□□□ -1.19
HMGB1P3-201ENST00000502802 CSADQ9Y600 493 aa7.59□□□□□ -1.19
HMGB1P3-201ENST00000502802 SYNGAP1Q96PV0 1343 aa7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 LTBP3Q9NS15 1303 aa7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 hCG_2014768A0A024R1R8 64 aa7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 PPP1R12AO14974 1030 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 DDX3YO15523 660 aaKnown RBP7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 RING1Q06587 406 aa7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 SSRP1Q08945 709 aaKnown RBP7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 ZYXQ15942 572 aaKnown RBP7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 MRM1Q6IN84 353 aaKnown RBP7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 C16orf86Q6ZW13 317 aa7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 EEPD1Q7L9B9 569 aa7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 KIAA0907Q7Z7F0 614 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 DMRTC2Q8IXT2 367 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 SLC9A7Q96T83 725 aa7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 WNT10AQ9GZT5 417 aa7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 TMX1Q9H3N1 280 aa7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 SPC25Q9HBM1 224 aa7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 RAD18Q9NS91 495 aa7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 KLHL3Q9UH77 587 aa7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 ZMYM5Q9UJ78 669 aa7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 HIF3AQ9Y2N7 669 aa7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 LEMD3Q9Y2U8 911 aa7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 PCDHGC5Q9Y5F6 944 aa7.58□□□□□ -1.2
HMGB1P3-201ENST00000502802 CHURC1-FNTBB4DL54 471 aa7.57□□□□□ -1.2
HMGB1P3-201ENST00000502802 OIP5O43482 229 aa7.57□□□□□ -1.2
HMGB1P3-201ENST00000502802 DIAPH1O60610 1272 aaKnown RBP7.57□□□□□ -1.2
HMGB1P3-201ENST00000502802 DNAJC6O75061 913 aa7.57□□□□□ -1.2
HMGB1P3-201ENST00000502802 ADAM11O75078 769 aa7.57□□□□□ -1.2
HMGB1P3-201ENST00000502802 ADAMTS2O95450 1211 aa7.57□□□□□ -1.2
HMGB1P3-201ENST00000502802 CD68P34810 354 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P3-201ENST00000502802 ETF1P62495 437 aaKnown RBP7.57□□□□□ -1.2
HMGB1P3-201ENST00000502802 ERVK-24P63145 666 aa7.57□□□□□ -1.2
HMGB1P3-201ENST00000502802 ACSF2Q96CM8 615 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P3-201ENST00000502802 NOP58Q9Y2X3 529 aaKnown RBP7.57□□□□□ -1.2
HMGB1P3-201ENST00000502802 DLGAP3O95886 979 aa7.56□□□□□ -1.2
HMGB1P3-201ENST00000502802 NID1P14543 1247 aa7.56□□□□□ -1.2
HMGB1P3-201ENST00000502802 GYS2P54840 703 aa7.56□□□□□ -1.2
HMGB1P3-201ENST00000502802 ID3Q02535 119 aa7.56□□□□□ -1.2
HMGB1P3-201ENST00000502802 FOXD4L6Q3SYB3 417 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P3-201ENST00000502802 TAF7LQ5H9L4 462 aa7.56□□□□□ -1.2
HMGB1P3-201ENST00000502802 PPM1JQ5JR12 505 aa7.56□□□□□ -1.2
HMGB1P3-201ENST00000502802 EXOSC6Q5RKV6 272 aaKnown RBP7.56□□□□□ -1.2
HMGB1P3-201ENST00000502802 FOXD4L3Q6VB84 417 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P3-201ENST00000502802 DCAF11Q8TEB1 546 aa7.56□□□□□ -1.2
HMGB1P3-201ENST00000502802 PICK1Q9NRD5 415 aa7.56□□□□□ -1.2
HMGB1P3-201ENST00000502802 COL4A3BPQ9Y5P4 624 aa7.56□□□□□ -1.2
HMGB1P3-201ENST00000502802 FANCGO15287 622 aa7.55□□□□□ -1.2
HMGB1P3-201ENST00000502802 RAG1P15918 1043 aa7.55□□□□□ -1.2
HMGB1P3-201ENST00000502802 ANAPC15P60006 121 aa7.55□□□□□ -1.2
HMGB1P3-201ENST00000502802 KRT76Q01546 638 aa7.55□□□□□ -1.2
HMGB1P3-201ENST00000502802 SLC7A5Q01650 507 aa7.55□□□□□ -1.2
HMGB1P3-201ENST00000502802 COL9A3Q14050 684 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P3-201ENST00000502802 KIAA1211LQ6NV74 962 aa7.55□□□□□ -1.2
HMGB1P3-201ENST00000502802 MCATQ8IVS2 390 aaKnown RBP7.55□□□□□ -1.2
HMGB1P3-201ENST00000502802 FAM13CQ8NE31 585 aa7.55□□□□□ -1.2
HMGB1P3-201ENST00000502802 SLC16A10Q8TF71 515 aa7.55□□□□□ -1.2
HMGB1P3-201ENST00000502802 FEZ1Q99689 392 aa7.55□□□□□ -1.2
HMGB1P3-201ENST00000502802 LRRC4BQ9NT99 713 aa7.55□□□□□ -1.2
HMGB1P3-201ENST00000502802 KCNK4Q9NYG8 393 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms