RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 PTCH2Q9Y6C5 1203 aa13.79□□□□□ -0.2
UBE2D3-211ENST00000502404 PDHXO00330 501 aa13.78□□□□□ -0.2
UBE2D3-211ENST00000502404 CXCL11O14625 94 aa13.78□□□□□ -0.2
UBE2D3-211ENST00000502404 ENTPD3O75355 529 aa13.78□□□□□ -0.2
UBE2D3-211ENST00000502404 PRDX5P30044 214 aa13.78□□□□□ -0.2
UBE2D3-211ENST00000502404 INPP5BP32019 993 aa13.78□□□□□ -0.2
UBE2D3-211ENST00000502404 DIXDC1Q155Q3 683 aa13.78□□□□□ -0.2
UBE2D3-211ENST00000502404 DZIP1Q86YF9 867 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-211ENST00000502404 TRMT2AQ8IZ69 625 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-211ENST00000502404 ARHGAP45Q92619 1136 aa13.78□□□□□ -0.2
UBE2D3-211ENST00000502404 CDCA7LQ96GN5 454 aa13.78□□□□□ -0.2
UBE2D3-211ENST00000502404 PICK1Q9NRD5 415 aa13.78□□□□□ -0.2
UBE2D3-211ENST00000502404 KCNH4Q9UQ05 1017 aa13.78□□□□□ -0.2
UBE2D3-211ENST00000502404 LRRFIP2Q9Y608 721 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-211ENST00000502404 OTOFQ9HC10 1997 aa13.78□□□□□ -0.2
UBE2D3-211ENST00000502404 IPO8O15397 1037 aaKnown RBP13.77□□□□□ -0.21
UBE2D3-211ENST00000502404 PHKA1P46020 1223 aa13.77□□□□□ -0.21
UBE2D3-211ENST00000502404 MVPQ14764 893 aaKnown RBP13.77□□□□□ -0.21
UBE2D3-211ENST00000502404 TPRNQ4KMQ1 711 aa13.77□□□□□ -0.21
UBE2D3-211ENST00000502404 CCDC102BQ68D86 513 aa13.77□□□□□ -0.21
UBE2D3-211ENST00000502404 C17orf99Q6UX52 265 aa13.77□□□□□ -0.21
UBE2D3-211ENST00000502404 FASTKD5Q7L8L6 764 aaKnown RBP13.77□□□□□ -0.21
UBE2D3-211ENST00000502404 ZSCAN29Q8IWY8 852 aaPredicted RBP13.77□□□□□ -0.21
UBE2D3-211ENST00000502404 ZNF454Q8N9F8 522 aa13.77□□□□□ -0.21
UBE2D3-211ENST00000502404 PARK7Q99497 189 aaKnown RBP13.77□□□□□ -0.21
UBE2D3-211ENST00000502404 PDS5AQ29RF7 1337 aaKnown RBP13.76□□□□□ -0.21
UBE2D3-211ENST00000502404 FMNL1O95466 1100 aaPredicted RBP13.76□□□□□ -0.21
UBE2D3-211ENST00000502404 PSMC4P43686 418 aa13.76□□□□□ -0.21
UBE2D3-211ENST00000502404 NFIAQ12857 509 aa13.76□□□□□ -0.21
UBE2D3-211ENST00000502404 NKX2-3Q8TAU0 364 aa13.76□□□□□ -0.21
UBE2D3-211ENST00000502404 RAET1EQ8TD07 263 aa13.76□□□□□ -0.21
UBE2D3-211ENST00000502404 FAM163AQ96GL9 167 aaPredicted RBP13.76□□□□□ -0.21
UBE2D3-211ENST00000502404 IDI2Q9BXS1 227 aa13.76□□□□□ -0.21
UBE2D3-211ENST00000502404 FAM198AQ9UFP1 575 aa13.76□□□□□ -0.21
UBE2D3-211ENST00000502404 ABCF2Q9UG63 623 aa13.76□□□□□ -0.21
UBE2D3-211ENST00000502404 MAP4K4O95819 1239 aaPredicted RBP13.75□□□□□ -0.21
UBE2D3-211ENST00000502404 RGS3P49796 1198 aa13.75□□□□□ -0.21
UBE2D3-211ENST00000502404 GSTO1P78417 241 aa13.75□□□□□ -0.21
UBE2D3-211ENST00000502404 CAP1Q01518 475 aa13.75□□□□□ -0.21
UBE2D3-211ENST00000502404 GORABQ5T7V8 394 aa13.75□□□□□ -0.21
UBE2D3-211ENST00000502404 SCYL3Q8IZE3 742 aa13.75□□□□□ -0.21
UBE2D3-211ENST00000502404 TRIM47Q96LD4 638 aa13.75□□□□□ -0.21
UBE2D3-211ENST00000502404 SRRDQ9UH36 339 aa13.75□□□□□ -0.21
UBE2D3-211ENST00000502404 CPA4Q9UI42 421 aa13.75□□□□□ -0.21
UBE2D3-211ENST00000502404 PA2G4Q9UQ80 394 aaKnown RBP13.75□□□□□ -0.21
UBE2D3-211ENST00000502404 GAKO14976 1311 aa13.74□□□□□ -0.21
UBE2D3-211ENST00000502404 SRGAP3O43295 1099 aa13.74□□□□□ -0.21
UBE2D3-211ENST00000502404 LDHCP07864 332 aa13.74□□□□□ -0.21
UBE2D3-211ENST00000502404 FCGRTP55899 365 aa13.74□□□□□ -0.21
UBE2D3-211ENST00000502404 TIMM10P62072 90 aa13.74□□□□□ -0.21
UBE2D3-211ENST00000502404 LCE2DQ5TA82 110 aaPredicted RBP13.74□□□□□ -0.21
UBE2D3-211ENST00000502404 ERICH6Q7L0X2 663 aa13.74□□□□□ -0.21
UBE2D3-211ENST00000502404 GPIHBP1Q8IV16 184 aa13.74□□□□□ -0.21
UBE2D3-211ENST00000502404 SH3TC2Q8TF17 1288 aa13.74□□□□□ -0.21
UBE2D3-211ENST00000502404 ZDHHC16Q969W1 377 aa13.74□□□□□ -0.21
UBE2D3-211ENST00000502404 ARHGAP39Q9C0H5 1083 aa13.74□□□□□ -0.21
UBE2D3-211ENST00000502404 BIN2Q9UBW5 565 aaPredicted RBP13.74□□□□□ -0.21
UBE2D3-211ENST00000502404 ZHX2Q9Y6X8 837 aa13.74□□□□□ -0.21
UBE2D3-211ENST00000502404 AK9Q5TCS8 1911 aa13.74□□□□□ -0.21
UBE2D3-211ENST00000502404 A0A1B0GUL7 405 aa13.73□□□□□ -0.21
UBE2D3-211ENST00000502404 CTNND1O60716 968 aaKnown RBP13.73□□□□□ -0.21
UBE2D3-211ENST00000502404 MYCP01106 439 aaPredicted RBP13.73□□□□□ -0.21
UBE2D3-211ENST00000502404 ADORA1P30542 326 aa13.73□□□□□ -0.21
UBE2D3-211ENST00000502404 GRK4P32298 578 aa13.73□□□□□ -0.21
UBE2D3-211ENST00000502404 RARSP54136 660 aaKnown RBP13.73□□□□□ -0.21
UBE2D3-211ENST00000502404 UBXN2AP68543 259 aa13.73□□□□□ -0.21
UBE2D3-211ENST00000502404 RASGRF1Q13972 1273 aa13.73□□□□□ -0.21
UBE2D3-211ENST00000502404 HABP4Q5JVS0 413 aaKnown RBP13.73□□□□□ -0.21
UBE2D3-211ENST00000502404 PPP4R3BQ5MIZ7 849 aa13.73□□□□□ -0.21
UBE2D3-211ENST00000502404 NEUROD6Q96NK8 337 aa13.73□□□□□ -0.21
UBE2D3-211ENST00000502404 MEIS3Q99687 375 aa13.73□□□□□ -0.21
UBE2D3-211ENST00000502404 SLC45A1Q9Y2W3 748 aa13.73□□□□□ -0.21
UBE2D3-211ENST00000502404 PHF20L1A8MW92 1017 aa13.72□□□□□ -0.21
UBE2D3-211ENST00000502404 CCER2I3L3R5 266 aa13.72□□□□□ -0.21
UBE2D3-211ENST00000502404 GPR37O15354 613 aa13.72□□□□□ -0.21
UBE2D3-211ENST00000502404 CAPN2P17655 700 aa13.72□□□□□ -0.21
UBE2D3-211ENST00000502404 PTPRAP18433 802 aa13.72□□□□□ -0.21
UBE2D3-211ENST00000502404 BTDP43251 543 aa13.72□□□□□ -0.21
UBE2D3-211ENST00000502404 MAP3K10Q02779 954 aa13.72□□□□□ -0.21
UBE2D3-211ENST00000502404 TFCP2Q12800 502 aa13.72□□□□□ -0.21
UBE2D3-211ENST00000502404 G3BP1Q13283 466 aaKnown RBP eCLIP13.72□□□□□ -0.21
UBE2D3-211ENST00000502404 MTX1Q13505 466 aa13.72□□□□□ -0.21
UBE2D3-211ENST00000502404 ZFPM1Q8IX07 1006 aa13.72□□□□□ -0.21
UBE2D3-211ENST00000502404 XAGE2Q96GT9 111 aa13.72□□□□□ -0.21
UBE2D3-211ENST00000502404 MYH13Q9UKX3 1938 aa13.72□□□□□ -0.21
UBE2D3-211ENST00000502404 RBBP6Q7Z6E9 1792 aaKnown RBP13.71□□□□□ -0.21
UBE2D3-211ENST00000502404 MROH7-TTC4A0A0A0MT08 1334 aa13.71□□□□□ -0.21
UBE2D3-211ENST00000502404 MYPNQ86TC9 1320 aa13.71□□□□□ -0.21
UBE2D3-211ENST00000502404 GPR75-ASB3A0A0A6YYF3 556 aa13.71□□□□□ -0.21
UBE2D3-211ENST00000502404 A0A0G2JLL6 359 aaPredicted RBP13.71□□□□□ -0.21
UBE2D3-211ENST00000502404 GNAI2P04899 355 aa13.71□□□□□ -0.21
UBE2D3-211ENST00000502404 GADL1Q6ZQY3 521 aa13.71□□□□□ -0.21
UBE2D3-211ENST00000502404 PRRT2Q7Z6L0 340 aaPredicted RBP13.71□□□□□ -0.21
UBE2D3-211ENST00000502404 NOL10Q9BSC4 688 aaKnown RBP13.71□□□□□ -0.21
UBE2D3-211ENST00000502404 AFG3L2Q9Y4W6 797 aa13.71□□□□□ -0.21
UBE2D3-211ENST00000502404 HTTP42858 3142 aa13.71□□□□□ -0.21
UBE2D3-211ENST00000502404 MAP3K7O43318 606 aa13.7□□□□□ -0.22
UBE2D3-211ENST00000502404 UQCRFS1P1P0C7P4 283 aa13.7□□□□□ -0.22
UBE2D3-211ENST00000502404 MECOMQ03112 1051 aa13.7□□□□□ -0.22
UBE2D3-211ENST00000502404 PICALMQ13492 652 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms