RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 MAP4K1Q92918 833 aa9.19□□□□□ -0.94
CDC42-205ENST00000498236 RBM17Q96I25 401 aaKnown RBP9.19□□□□□ -0.94
CDC42-205ENST00000498236 PDS5AQ29RF7 1337 aaKnown RBP9.19□□□□□ -0.94
CDC42-205ENST00000498236 CCDC171Q6TFL3 1326 aa9.19□□□□□ -0.94
CDC42-205ENST00000498236 IGSF3O75054 1194 aa9.18□□□□□ -0.94
CDC42-205ENST00000498236 ZAP70P43403 619 aa9.18□□□□□ -0.94
CDC42-205ENST00000498236 ZSCAN25Q6NSZ9 544 aa9.18□□□□□ -0.94
CDC42-205ENST00000498236 PDXDC2PQ6P474 469 aa9.18□□□□□ -0.94
CDC42-205ENST00000498236 FBXO33Q7Z6M2 555 aa9.18□□□□□ -0.94
CDC42-205ENST00000498236 CCDC24Q8N4L8 307 aa9.18□□□□□ -0.94
CDC42-205ENST00000498236 SPATA5Q8NB90 893 aa9.18□□□□□ -0.94
CDC42-205ENST00000498236 ZNF775Q96BV0 537 aaPredicted RBP9.18□□□□□ -0.94
CDC42-205ENST00000498236 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.18□□□□□ -0.94
CDC42-205ENST00000498236 ANTXR1Q9H6X2 564 aa9.18□□□□□ -0.94
CDC42-205ENST00000498236 GNL3LQ9NVN8 582 aaKnown RBP9.18□□□□□ -0.94
CDC42-205ENST00000498236 HMG20BQ9P0W2 317 aa9.18□□□□□ -0.94
CDC42-205ENST00000498236 LEMD3Q9Y2U8 911 aa9.18□□□□□ -0.94
CDC42-205ENST00000498236 IRS2Q9Y4H2 1338 aa9.18□□□□□ -0.94
CDC42-205ENST00000498236 GPSM3Q9Y4H4 160 aa9.18□□□□□ -0.94
CDC42-205ENST00000498236 PARP3Q9Y6F1 533 aa9.18□□□□□ -0.94
CDC42-205ENST00000498236 XDHP47989 1333 aa9.17□□□□□ -0.94
CDC42-205ENST00000498236 CYP2E1P05181 493 aaPredicted RBP9.17□□□□□ -0.94
CDC42-205ENST00000498236 MMP10P09238 476 aa9.17□□□□□ -0.94
CDC42-205ENST00000498236 PDE6BP35913 854 aa9.17□□□□□ -0.94
CDC42-205ENST00000498236 PTK2Q05397 1052 aa9.17□□□□□ -0.94
CDC42-205ENST00000498236 RASGRF1Q13972 1273 aa9.17□□□□□ -0.94
CDC42-205ENST00000498236 NECTIN1Q15223 517 aa9.17□□□□□ -0.94
CDC42-205ENST00000498236 UBE3CQ15386 1083 aa9.17□□□□□ -0.94
CDC42-205ENST00000498236 TSGA10IPQ3SY00 556 aa9.17□□□□□ -0.94
CDC42-205ENST00000498236 CAVIN4Q5BKX8 364 aa9.17□□□□□ -0.94
CDC42-205ENST00000498236 TMED8Q6PL24 325 aaPredicted RBP9.17□□□□□ -0.94
CDC42-205ENST00000498236 FAM84BQ96KN1 310 aaPredicted RBP9.17□□□□□ -0.94
CDC42-205ENST00000498236 PPP1R12CQ9BZL4 782 aa9.17□□□□□ -0.94
CDC42-205ENST00000498236 TAF1P21675 1872 aa9.17□□□□□ -0.94
CDC42-205ENST00000498236 RNF223E7ERA6 249 aa9.16□□□□□ -0.94
CDC42-205ENST00000498236 SNAP23O00161 211 aa9.16□□□□□ -0.94
CDC42-205ENST00000498236 DGAT1O75907 488 aa9.16□□□□□ -0.94
CDC42-205ENST00000498236 SRGNP10124 158 aa9.16□□□□□ -0.94
CDC42-205ENST00000498236 NPR1P16066 1061 aa9.16□□□□□ -0.94
CDC42-205ENST00000498236 ADD2P35612 726 aa9.16□□□□□ -0.94
CDC42-205ENST00000498236 PTH1RQ03431 593 aa9.16□□□□□ -0.94
CDC42-205ENST00000498236 PKDCCQ504Y2 493 aa9.16□□□□□ -0.94
CDC42-205ENST00000498236 PI16Q6UXB8 463 aa9.16□□□□□ -0.94
CDC42-205ENST00000498236 ZNF589Q86UQ0 364 aaPredicted RBP9.16□□□□□ -0.94
CDC42-205ENST00000498236 HSCBQ8IWL3 235 aa9.16□□□□□ -0.94
CDC42-205ENST00000498236 SLC16A10Q8TF71 515 aa9.16□□□□□ -0.94
CDC42-205ENST00000498236 APPBP2Q92624 585 aa9.16□□□□□ -0.94
CDC42-205ENST00000498236 DSCC1Q9BVC3 393 aa9.16□□□□□ -0.94
CDC42-205ENST00000498236 TM6SF1Q9BZW5 370 aa9.16□□□□□ -0.94
CDC42-205ENST00000498236 PODXL2Q9NZ53 605 aa9.16□□□□□ -0.94
CDC42-205ENST00000498236 PALD1Q9ULE6 856 aa9.16□□□□□ -0.94
CDC42-205ENST00000498236 ANKRD31Q8N7Z5 1873 aa9.16□□□□□ -0.94
CDC42-205ENST00000498236 LRRC37AA6NMS7 1700 aa9.16□□□□□ -0.94
CDC42-205ENST00000498236 DOCK2Q92608 1830 aa9.15□□□□□ -0.94
CDC42-205ENST00000498236 MAST3O60307 1309 aa9.15□□□□□ -0.94
CDC42-205ENST00000498236 PALM3A6NDB9 673 aaPredicted RBP9.15□□□□□ -0.94
CDC42-205ENST00000498236 PDIA4P13667 645 aaKnown RBP9.15□□□□□ -0.94
CDC42-205ENST00000498236 ALDH1B1P30837 517 aa9.15□□□□□ -0.94
CDC42-205ENST00000498236 KCNJ4P48050 445 aa9.15□□□□□ -0.94
CDC42-205ENST00000498236 MCM2P49736 904 aa9.15□□□□□ -0.94
CDC42-205ENST00000498236 RNF20Q5VTR2 975 aa9.15□□□□□ -0.94
CDC42-205ENST00000498236 SP8Q8IXZ3 490 aa9.15□□□□□ -0.94
CDC42-205ENST00000498236 OSBP2Q969R2 916 aa9.15□□□□□ -0.94
CDC42-205ENST00000498236 UCN2Q96RP3 112 aa9.15□□□□□ -0.94
CDC42-205ENST00000498236 UNC93B1Q9H1C4 597 aa9.15□□□□□ -0.94
CDC42-205ENST00000498236 PIH1D3Q9NQM4 214 aaKnown RBP9.15□□□□□ -0.94
CDC42-205ENST00000498236 DENND2AQ9ULE3 1009 aa9.15□□□□□ -0.94
CDC42-205ENST00000498236 RBM8AQ9Y5S9 174 aaKnown RBP9.15□□□□□ -0.94
CDC42-205ENST00000498236 SNX14Q9Y5W7 946 aa9.15□□□□□ -0.94
CDC42-205ENST00000498236 TCRBV5S4A2TA0A5A2 114 aa9.14□□□□□ -0.95
CDC42-205ENST00000498236 K7ELQ4 463 aaPredicted RBP9.14□□□□□ -0.95
CDC42-205ENST00000498236 CD2BP2O95400 341 aaKnown RBP9.14□□□□□ -0.95
CDC42-205ENST00000498236 S1PR4O95977 384 aa9.14□□□□□ -0.95
CDC42-205ENST00000498236 PDE6AP16499 860 aa9.14□□□□□ -0.95
CDC42-205ENST00000498236 ZKSCAN1P17029 563 aaPredicted RBP9.14□□□□□ -0.95
CDC42-205ENST00000498236 RFX1P22670 979 aa9.14□□□□□ -0.95
CDC42-205ENST00000498236 ATP2B4P23634 1241 aa9.14□□□□□ -0.95
CDC42-205ENST00000498236 HIBADHP31937 336 aaKnown RBP9.14□□□□□ -0.95
CDC42-205ENST00000498236 GYG1P46976 350 aa9.14□□□□□ -0.95
CDC42-205ENST00000498236 MAP3K12Q12852 859 aa9.14□□□□□ -0.95
CDC42-205ENST00000498236 SLC9C2Q5TAH2 1124 aa9.14□□□□□ -0.95
CDC42-205ENST00000498236 SPRYD7Q5W111 196 aa9.14□□□□□ -0.95
CDC42-205ENST00000498236 CREB3L3Q68CJ9 461 aa9.14□□□□□ -0.95
CDC42-205ENST00000498236 PTCRAQ6ISU1 281 aaPredicted RBP9.14□□□□□ -0.95
CDC42-205ENST00000498236 DEFB132Q7Z7B7 95 aa9.14□□□□□ -0.95
CDC42-205ENST00000498236 ZNF598Q86UK7 904 aaKnown RBP9.14□□□□□ -0.95
CDC42-205ENST00000498236 VPS37DQ86XT2 251 aa9.14□□□□□ -0.95
CDC42-205ENST00000498236 ZNF592Q92610 1267 aa9.14□□□□□ -0.95
CDC42-205ENST00000498236 PBXIP1Q96AQ6 731 aa9.14□□□□□ -0.95
CDC42-205ENST00000498236 MASTLQ96GX5 879 aa9.14□□□□□ -0.95
CDC42-205ENST00000498236 SEC62Q99442 399 aaKnown RBP9.14□□□□□ -0.95
CDC42-205ENST00000498236 ANKIB1Q9P2G1 1089 aa9.14□□□□□ -0.95
CDC42-205ENST00000498236 ATP6V0A2Q9Y487 856 aa9.14□□□□□ -0.95
CDC42-205ENST00000498236 LTBP1Q14766 1721 aa9.14□□□□□ -0.95
CDC42-205ENST00000498236 MYH7P12883 1935 aa9.13□□□□□ -0.95
CDC42-205ENST00000498236 RPAP1Q9BWH6 1393 aaPredicted RBP9.13□□□□□ -0.95
CDC42-205ENST00000498236 WTIPA6NIX2 430 aaPredicted RBP9.13□□□□□ -0.95
CDC42-205ENST00000498236 M0R2C6 588 aa9.13□□□□□ -0.95
CDC42-205ENST00000498236 SLC27A2O14975 620 aa9.13□□□□□ -0.95
CDC42-205ENST00000498236 IDH1O75874 414 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms