RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 ATP6V1DQ9Y5K8 247 aa9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 TACC3Q9Y6A5 838 aa9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 CCDC69A6NI79 296 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 H3BQV1 296 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 CPLX1O14810 134 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 ZBTB43O43298 467 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 DHX16O60231 1041 aaKnown RBP9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 TRAK2O60296 914 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 ECE2O60344 883 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 CHRM1P11229 460 aaPredicted RBP9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 DOK7Q18PE1 504 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 SLC4A8Q2Y0W8 1093 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 SBK1Q52WX2 424 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 CCDC93Q567U6 631 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 IFFO2Q5TF58 517 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 LARP1BQ659C4 914 aaKnown RBP9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 CC2D2BQ6DHV5 1058 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 CTR9Q6PD62 1173 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 SGMS1Q86VZ5 419 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 TEX11Q8IYF3 940 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 SUPT20HQ8NEM7 779 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 NKX2-3Q8TAU0 364 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 RNF25Q96BH1 459 aaPredicted RBP9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 MTA3Q9BTC8 594 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 MCM9Q9NXL9 1143 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 BRPF3Q9ULD4 1205 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 SUGT1Q9Y2Z0 365 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 TNKSO95271 1327 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 FLT1P17948 1338 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 DOCK1Q14185 1865 aa9.46□□□□□ -0.9
PDZRN3-212ENST00000498048 USP17L12C9JPN9 530 aa9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 USP17L21D6R901 530 aa9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 F8W031 263 aaPredicted RBP9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 RIOK3O14730 519 aaKnown RBP9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 PPIP5K2O43314 1243 aa9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 CDKL5O76039 1030 aa9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 CTDNEP1O95476 244 aa9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 CYP2D6P10635 497 aa9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 NCLP19338 710 aaKnown RBP9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 POLD1P28340 1107 aa9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 LIFRP42702 1097 aa9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 PPP4CP60510 307 aa9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 PDE4BQ07343 736 aa9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 AOC3Q16853 763 aa9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 SKOR2Q2VWA4 1001 aaPredicted RBP9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 FOXD4L6Q3SYB3 417 aaPredicted RBP9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 CPLX2Q6PUV4 134 aaKnown RBP9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 FOXD4L3Q6VB84 417 aaPredicted RBP9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 SYNE3Q6ZMZ3 975 aa9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 MAPKAPK5Q8IW41 473 aa9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 CHAMP1Q96JM3 812 aa9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 ZKSCAN3Q9BRR0 538 aa9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 INCENPQ9NQS7 918 aa9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 TTF2Q9UNY4 1162 aaKnown RBP9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 HPS5Q9UPZ3 1129 aa9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 DAGLAQ9Y4D2 1042 aa9.45□□□□□ -0.9
PDZRN3-212ENST00000498048 GPR75-ASB3A0A0A6YYF3 556 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 SMIM22K7EJ46 135 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 FIBPO43427 364 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 ORC4O43929 436 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 RANBP6O60518 1105 aaKnown RBP9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 PRDM1O75626 825 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 ZBTB7AO95365 584 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 USP17L8P0C7I0 530 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 RXRAP19793 462 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 KIAA2012Q0VF49 1180 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 RTN1Q16799 776 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 CSPP1Q1MSJ5 1256 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 PODNQ7Z5L7 613 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 FERMT3Q86UX7 667 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 IQCA1Q86XH1 822 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 ZNF654Q8IZM8 581 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 CERS5Q8N5B7 392 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 TTLL6Q8N841 843 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 TGFBRAP1Q8WUH2 860 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 MYL10Q9BUA6 226 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 MTFR1LQ9H019 292 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 SENP2Q9HC62 589 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 ZSWIM5Q9P217 1185 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 CNPY2Q9Y2B0 182 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 SLC12A7Q9Y666 1083 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 DDX49Q9Y6V7 483 aaKnown RBP9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 STK36Q9NRP7 1315 aa9.44□□□□□ -0.9
PDZRN3-212ENST00000498048 PARP14Q460N5 1801 aa9.43□□□□□ -0.9
PDZRN3-212ENST00000498048 HAX1O00165 279 aa9.43□□□□□ -0.9
PDZRN3-212ENST00000498048 C21orf2O43822 256 aa9.43□□□□□ -0.9
PDZRN3-212ENST00000498048 MBD3O95983 291 aa9.43□□□□□ -0.9
PDZRN3-212ENST00000498048 POLR3DP05423 398 aaPredicted RBP9.43□□□□□ -0.9
PDZRN3-212ENST00000498048 DPEP1P16444 411 aa9.43□□□□□ -0.9
PDZRN3-212ENST00000498048 NT5C2P49902 561 aa9.43□□□□□ -0.9
PDZRN3-212ENST00000498048 RCAN1P53805 252 aa9.43□□□□□ -0.9
PDZRN3-212ENST00000498048 FKBP1AP62942 108 aaKnown RBP9.43□□□□□ -0.9
PDZRN3-212ENST00000498048 KRT85P78386 507 aa9.43□□□□□ -0.9
PDZRN3-212ENST00000498048 EVX2Q03828 476 aa9.43□□□□□ -0.9
PDZRN3-212ENST00000498048 KLHL40Q2TBA0 621 aa9.43□□□□□ -0.9
PDZRN3-212ENST00000498048 GRIPAP1Q4V328 841 aa9.43□□□□□ -0.9
PDZRN3-212ENST00000498048 CCDC144CPQ8IYA2 1237 aa9.43□□□□□ -0.9
PDZRN3-212ENST00000498048 TMEM87AQ8NBN3 555 aa9.43□□□□□ -0.9
PDZRN3-212ENST00000498048 IGDCC4Q8TDY8 1250 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms