RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 CCT2P78371 535 aaKnown RBP13.4□□□□□ -0.26
SNRNP200-208ENST00000497539 PPARAQ07869 468 aa13.4□□□□□ -0.26
SNRNP200-208ENST00000497539 APOA5Q6Q788 366 aa13.4□□□□□ -0.26
SNRNP200-208ENST00000497539 MFSD6Q6ZSS7 791 aa13.4□□□□□ -0.26
SNRNP200-208ENST00000497539 CKAP2LQ8IYA6 745 aa13.4□□□□□ -0.26
SNRNP200-208ENST00000497539 TDRD7Q8NHU6 1098 aaKnown RBP13.4□□□□□ -0.26
SNRNP200-208ENST00000497539 B4E1Z4 1266 aa13.4□□□□□ -0.26
SNRNP200-208ENST00000497539 POLRMTO00411 1230 aaKnown RBP13.4□□□□□ -0.26
SNRNP200-208ENST00000497539 GTF2F1P35269 517 aaKnown RBP eCLIP13.4□□□□□ -0.26
SNRNP200-208ENST00000497539 TDO2P48775 406 aa13.4□□□□□ -0.26
SNRNP200-208ENST00000497539 LUZP1Q86V48 1076 aa13.4□□□□□ -0.26
SNRNP200-208ENST00000497539 NKX2-3Q8TAU0 364 aa13.4□□□□□ -0.26
SNRNP200-208ENST00000497539 DDX11Q96FC9 970 aa13.4□□□□□ -0.26
SNRNP200-208ENST00000497539 SERPINB2P05120 415 aa13.39□□□□□ -0.27
SNRNP200-208ENST00000497539 U2AF2P26368 475 aaKnown RBP eCLIP13.39□□□□□ -0.27
SNRNP200-208ENST00000497539 TXNRD1Q16881 649 aa13.39□□□□□ -0.27
SNRNP200-208ENST00000497539 TMTC2Q8N394 836 aa13.39□□□□□ -0.27
SNRNP200-208ENST00000497539 AKT1S1Q96B36 256 aa13.39□□□□□ -0.27
SNRNP200-208ENST00000497539 RBM17Q96I25 401 aaKnown RBP13.39□□□□□ -0.27
SNRNP200-208ENST00000497539 RCOR1Q9UKL0 485 aa13.39□□□□□ -0.27
SNRNP200-208ENST00000497539 NAV1Q8NEY1 1877 aa13.39□□□□□ -0.27
SNRNP200-208ENST00000497539 LIG1P18858 919 aa13.39□□□□□ -0.27
SNRNP200-208ENST00000497539 LRMPQ12912 555 aa13.39□□□□□ -0.27
SNRNP200-208ENST00000497539 PROM2Q8N271 834 aa13.39□□□□□ -0.27
SNRNP200-208ENST00000497539 PDCL2Q8N4E4 241 aa13.39□□□□□ -0.27
SNRNP200-208ENST00000497539 NRBP1Q9UHY1 535 aa13.39□□□□□ -0.27
SNRNP200-208ENST00000497539 BBOX1O75936 387 aa13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 ATP2B4P23634 1241 aa13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 MECOMQ03112 1051 aa13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 CTDSPL2Q05D32 466 aa13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 DDR1Q08345 913 aa13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 SBK1Q52WX2 424 aa13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 NBPF11Q86T75 865 aa13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 WDR66Q8TBY9 1149 aa13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 SPATA32Q96LK8 384 aa13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 ZNF396Q96N95 335 aaPredicted RBP13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 ZSWIM5Q9P217 1185 aa13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 TFIP11Q9UBB9 837 aaKnown RBP13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 FOCADQ5VW36 1801 aa13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 LOC102724159A0A0B4J2E5 919 aa13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 METAP2P50579 478 aaKnown RBP eCLIP13.38□□□□□ -0.274e-7■■■□□ 14.8
SNRNP200-208ENST00000497539 PPP2R5BQ15173 497 aa13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 PWP2Q15269 919 aaKnown RBP13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 NTRK3Q16288 839 aa13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 RBM43Q6ZSC3 357 aaKnown RBP13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 BRAPQ7Z569 592 aa13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 MIGA1Q8NAN2 632 aa13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 FBXO18Q8NFZ0 1043 aa13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 ABCF2Q9UG63 623 aa13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 COL11A2P13942 1736 aaPredicted RBP13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 CDK5RAP2Q96SN8 1893 aa13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 BAZ2AQ9UIF9 1905 aaKnown RBP13.38□□□□□ -0.27
SNRNP200-208ENST00000497539 TRIM37O94972 964 aa13.37□□□□□ -0.27
SNRNP200-208ENST00000497539 SATB1Q01826 763 aa13.37□□□□□ -0.27
SNRNP200-208ENST00000497539 TMEM67Q5HYA8 995 aa13.37□□□□□ -0.27
SNRNP200-208ENST00000497539 ZNF804AQ7Z570 1209 aa13.37□□□□□ -0.27
SNRNP200-208ENST00000497539 RPGRQ92834 1020 aaKnown RBP13.37□□□□□ -0.27
SNRNP200-208ENST00000497539 PRDM16Q9HAZ2 1276 aa13.37□□□□□ -0.27
SNRNP200-208ENST00000497539 ATP8A2Q9NTI2 1148 aa13.37□□□□□ -0.27
SNRNP200-208ENST00000497539 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.37□□□□□ -0.27
SNRNP200-208ENST00000497539 ROBO3Q96MS0 1386 aa13.37□□□□□ -0.27
SNRNP200-208ENST00000497539 ZBTB43O43298 467 aa13.37□□□□□ -0.27
SNRNP200-208ENST00000497539 ORC4O43929 436 aa13.37□□□□□ -0.27
SNRNP200-208ENST00000497539 CCDC192P0DO97 292 aa13.37□□□□□ -0.27
SNRNP200-208ENST00000497539 IL1R1P14778 569 aa13.37□□□□□ -0.27
SNRNP200-208ENST00000497539 CAPN2P17655 700 aa13.37□□□□□ -0.27
SNRNP200-208ENST00000497539 NAA30Q147X3 362 aaPredicted RBP13.37□□□□□ -0.27
SNRNP200-208ENST00000497539 SART3Q15020 963 aaKnown RBP13.37□□□□□ -0.27
SNRNP200-208ENST00000497539 CPLX2Q6PUV4 134 aaKnown RBP13.37□□□□□ -0.27
SNRNP200-208ENST00000497539 DRC7Q8IY82 874 aa13.37□□□□□ -0.27
SNRNP200-208ENST00000497539 FLAD1Q8NFF5 587 aa13.37□□□□□ -0.27
SNRNP200-208ENST00000497539 FAM217BQ9NTX9 383 aaPredicted RBP13.37□□□□□ -0.27
SNRNP200-208ENST00000497539 IQSEC3Q9UPP2 1182 aaPredicted RBP13.37□□□□□ -0.27
SNRNP200-208ENST00000497539 SEC23AQ15436 765 aa13.36□□□□□ -0.27
SNRNP200-208ENST00000497539 CCDC186Q7Z3E2 898 aa13.36□□□□□ -0.27
SNRNP200-208ENST00000497539 TIGD1Q96MW7 591 aa13.36□□□□□ -0.27
SNRNP200-208ENST00000497539 DDX19AQ9NUU7 478 aaKnown RBP13.36□□□□□ -0.27
SNRNP200-208ENST00000497539 ORC3Q9UBD5 711 aaPredicted RBP13.36□□□□□ -0.27
SNRNP200-208ENST00000497539 CCDC66A2RUB6 948 aa13.36□□□□□ -0.27
SNRNP200-208ENST00000497539 CHAF1AQ13111 956 aaPredicted RBP13.36□□□□□ -0.27
SNRNP200-208ENST00000497539 TXNRD3Q86VQ6 643 aa13.36□□□□□ -0.27
SNRNP200-208ENST00000497539 C8orf76Q96K31 380 aa13.36□□□□□ -0.27
SNRNP200-208ENST00000497539 C16orf45Q96MC5 204 aaPredicted RBP13.36□□□□□ -0.27
SNRNP200-208ENST00000497539 CRNKL1Q9BZJ0 848 aaKnown RBP13.36□□□□□ -0.27
SNRNP200-208ENST00000497539 RTEL1Q9NZ71 1219 aa13.36□□□□□ -0.27
SNRNP200-208ENST00000497539 TFCP2L1Q9NZI6 479 aa13.36□□□□□ -0.27
SNRNP200-208ENST00000497539 CPLX1O14810 134 aa13.36□□□□□ -0.27
SNRNP200-208ENST00000497539 IFNAR1P17181 557 aa13.36□□□□□ -0.27
SNRNP200-208ENST00000497539 PPP4CP60510 307 aa13.36□□□□□ -0.27
SNRNP200-208ENST00000497539 GSTO1P78417 241 aa13.36□□□□□ -0.27
SNRNP200-208ENST00000497539 GPSM2P81274 684 aa13.36□□□□□ -0.27
SNRNP200-208ENST00000497539 ESR2Q92731 530 aa13.36□□□□□ -0.27
SNRNP200-208ENST00000497539 TRIM34Q9BYJ4 488 aa13.36□□□□□ -0.27
SNRNP200-208ENST00000497539 ARPP21Q9UBL0 812 aaPredicted RBP13.36□□□□□ -0.27
SNRNP200-208ENST00000497539 TTC36A6NLP5 189 aa13.35□□□□□ -0.27
SNRNP200-208ENST00000497539 IFIT3O14879 490 aaKnown RBP13.35□□□□□ -0.27
SNRNP200-208ENST00000497539 FMNL1O95466 1100 aaPredicted RBP13.35□□□□□ -0.27
SNRNP200-208ENST00000497539 CTR9Q6PD62 1173 aa13.35□□□□□ -0.27
SNRNP200-208ENST00000497539 CCDC24Q8N4L8 307 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms