RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 ECE2O60344 883 aa24.7■■□□□ 1.54
FGFR1-223ENST00000496296 SART3Q15020 963 aaKnown RBP24.7■■□□□ 1.54
FGFR1-223ENST00000496296 SBK1Q52WX2 424 aa24.7■■□□□ 1.54
FGFR1-223ENST00000496296 RRP12Q5JTH9 1297 aaKnown RBP24.7■■□□□ 1.54
FGFR1-223ENST00000496296 PIM2Q9P1W9 311 aa24.7■■□□□ 1.54
FGFR1-223ENST00000496296 CHD4Q14839 1912 aa24.69■■□□□ 1.54
FGFR1-223ENST00000496296 MYH2Q9UKX2 1941 aa24.69■■□□□ 1.54
FGFR1-223ENST00000496296 GAKO14976 1311 aa24.69■■□□□ 1.54
FGFR1-223ENST00000496296 PTPDC1A2A3K4 754 aa24.69■■□□□ 1.54
FGFR1-223ENST00000496296 AOC3Q16853 763 aa24.69■■□□□ 1.54
FGFR1-223ENST00000496296 STRIP1Q5VSL9 837 aa24.69■■□□□ 1.54
FGFR1-223ENST00000496296 LEO1Q8WVC0 666 aaPredicted RBP24.69■■□□□ 1.54
FGFR1-223ENST00000496296 ESR2Q92731 530 aa24.69■■□□□ 1.54
FGFR1-223ENST00000496296 INCENPQ9NQS7 918 aa24.69■■□□□ 1.54
FGFR1-223ENST00000496296 ZSWIM5Q9P217 1185 aa24.69■■□□□ 1.54
FGFR1-223ENST00000496296 SNED1Q8TER0 1413 aa24.69■■□□□ 1.54
FGFR1-223ENST00000496296 FKBP1AP62942 108 aaKnown RBP24.68■■□□□ 1.54
FGFR1-223ENST00000496296 ATL3Q6DD88 541 aa24.68■■□□□ 1.54
FGFR1-223ENST00000496296 MTA3Q9BTC8 594 aa24.68■■□□□ 1.54
FGFR1-223ENST00000496296 MCM9Q9NXL9 1143 aa24.68■■□□□ 1.54
FGFR1-223ENST00000496296 KLF18A0A0U1RQI7 1052 aa24.68■■□□□ 1.54
FGFR1-223ENST00000496296 ERICH2A1L162 156 aa24.68■■□□□ 1.54
FGFR1-223ENST00000496296 SH2B2O14492 632 aaPredicted RBP24.68■■□□□ 1.54
FGFR1-223ENST00000496296 PPIP5K2O43314 1243 aa24.68■■□□□ 1.54
FGFR1-223ENST00000496296 STK11IPQ8N1F8 1099 aa24.68■■□□□ 1.54
FGFR1-223ENST00000496296 CERS5Q8N5B7 392 aa24.68■■□□□ 1.54
FGFR1-223ENST00000496296 PSMD1Q99460 953 aa24.68■■□□□ 1.54
FGFR1-223ENST00000496296 SYT17Q9BSW7 474 aa24.68■■□□□ 1.54
FGFR1-223ENST00000496296 TTF2Q9UNY4 1162 aaKnown RBP24.68■■□□□ 1.54
FGFR1-223ENST00000496296 H3BQV1 296 aa24.67■■□□□ 1.54
FGFR1-223ENST00000496296 IFFO2Q5TF58 517 aa24.67■■□□□ 1.54
FGFR1-223ENST00000496296 F8W031 263 aaPredicted RBP24.66■■□□□ 1.54
FGFR1-223ENST00000496296 IFIT3O14879 490 aaKnown RBP24.66■■□□□ 1.54
FGFR1-223ENST00000496296 DHX16O60231 1041 aaKnown RBP24.66■■□□□ 1.54
FGFR1-223ENST00000496296 TMEM67Q5HYA8 995 aa24.66■■□□□ 1.54
FGFR1-223ENST00000496296 SPATA32Q96LK8 384 aa24.66■■□□□ 1.54
FGFR1-223ENST00000496296 GPHNQ9NQX3 736 aaPredicted RBP24.66■■□□□ 1.54
FGFR1-223ENST00000496296 TACC3Q9Y6A5 838 aa24.66■■□□□ 1.54
FGFR1-223ENST00000496296 CYP2D7A0A087X1C5 515 aa24.66■■□□□ 1.54
FGFR1-223ENST00000496296 USP17L3A6NCW0 530 aa24.66■■□□□ 1.54
FGFR1-223ENST00000496296 USP17L4A6NCW7 530 aa24.66■■□□□ 1.54
FGFR1-223ENST00000496296 FAM173BQ6P4H8 233 aa24.66■■□□□ 1.54
FGFR1-223ENST00000496296 USP17L1Q7RTZ2 530 aa24.66■■□□□ 1.54
FGFR1-223ENST00000496296 TEX11Q8IYF3 940 aa24.66■■□□□ 1.54
FGFR1-223ENST00000496296 TGFBRAP1Q8WUH2 860 aa24.66■■□□□ 1.54
FGFR1-223ENST00000496296 CFAP45Q9UL16 551 aa24.66■■□□□ 1.54
FGFR1-223ENST00000496296 BAZ2AQ9UIF9 1905 aaKnown RBP24.65■■□□□ 1.54
FGFR1-223ENST00000496296 LIFRP42702 1097 aa24.65■■□□□ 1.54
FGFR1-223ENST00000496296 CCT2P78371 535 aaKnown RBP24.65■■□□□ 1.54
FGFR1-223ENST00000496296 PDE4BQ07343 736 aa24.65■■□□□ 1.54
FGFR1-223ENST00000496296 NFXL1Q6ZNB6 911 aa24.65■■□□□ 1.54
FGFR1-223ENST00000496296 ZSCAN30Q86W11 494 aa24.65■■□□□ 1.54
FGFR1-223ENST00000496296 IGDCC4Q8TDY8 1250 aa24.65■■□□□ 1.54
FGFR1-223ENST00000496296 DDX11Q96FC9 970 aa24.65■■□□□ 1.54
FGFR1-223ENST00000496296 MKRN1Q9UHC7 482 aaKnown RBP24.65■■□□□ 1.54
FGFR1-223ENST00000496296 DAGLAQ9Y4D2 1042 aa24.65■■□□□ 1.54
FGFR1-223ENST00000496296 GOLGA8BA8MQT2 603 aa24.64■■□□□ 1.54
FGFR1-223ENST00000496296 FGRP09769 529 aa24.64■■□□□ 1.54
FGFR1-223ENST00000496296 ADD1P35611 737 aaKnown RBP24.64■■□□□ 1.54
FGFR1-223ENST00000496296 UBAC1Q9BSL1 405 aa24.64■■□□□ 1.54
FGFR1-223ENST00000496296 VPS33BQ9H267 617 aa24.64■■□□□ 1.54
FGFR1-223ENST00000496296 NT5C2P49902 561 aa24.64■■□□□ 1.53
FGFR1-223ENST00000496296 HHIPL2Q6UWX4 724 aa24.64■■□□□ 1.53
FGFR1-223ENST00000496296 TMTC2Q8N394 836 aa24.64■■□□□ 1.53
FGFR1-223ENST00000496296 TEKT1Q969V4 418 aa24.64■■□□□ 1.53
FGFR1-223ENST00000496296 USP17L8P0C7I0 530 aa24.63■■□□□ 1.53
FGFR1-223ENST00000496296 DALRD3Q5D0E6 543 aaKnown RBP24.63■■□□□ 1.53
FGFR1-223ENST00000496296 SGMS1Q86VZ5 419 aa24.63■■□□□ 1.53
FGFR1-223ENST00000496296 MXD3Q9BW11 206 aa24.63■■□□□ 1.53
FGFR1-223ENST00000496296 DDX19AQ9NUU7 478 aaKnown RBP24.63■■□□□ 1.53
FGFR1-223ENST00000496296 CCDC69A6NI79 296 aa24.62■■□□□ 1.53
FGFR1-223ENST00000496296 LAMB1P07942 1786 aa24.62■■□□□ 1.53
FGFR1-223ENST00000496296 DACT2Q5SW24 774 aa24.62■■□□□ 1.53
FGFR1-223ENST00000496296 C12orf60Q5U649 245 aa24.62■■□□□ 1.53
FGFR1-223ENST00000496296 SYNE3Q6ZMZ3 975 aa24.62■■□□□ 1.53
FGFR1-223ENST00000496296 RBM43Q6ZSC3 357 aaKnown RBP24.62■■□□□ 1.53
FGFR1-223ENST00000496296 MAPKAPK5Q8IW41 473 aa24.62■■□□□ 1.53
FGFR1-223ENST00000496296 NKX2-3Q8TAU0 364 aa24.62■■□□□ 1.53
FGFR1-223ENST00000496296 LY9Q9HBG7 655 aa24.62■■□□□ 1.53
FGFR1-223ENST00000496296 KCNQ5Q9NR82 932 aa24.62■■□□□ 1.53
FGFR1-223ENST00000496296 HPS5Q9UPZ3 1129 aa24.62■■□□□ 1.53
FGFR1-223ENST00000496296 CD2APQ9Y5K6 639 aa24.62■■□□□ 1.53
FGFR1-223ENST00000496296 ORC4O43929 436 aa24.62■■□□□ 1.53
FGFR1-223ENST00000496296 RANBP6O60518 1105 aaKnown RBP24.62■■□□□ 1.53
FGFR1-223ENST00000496296 POLR3DP05423 398 aaPredicted RBP24.62■■□□□ 1.53
FGFR1-223ENST00000496296 RHBDL3P58872 404 aa24.62■■□□□ 1.53
FGFR1-223ENST00000496296 WTAPQ15007 396 aa24.62■■□□□ 1.53
FGFR1-223ENST00000496296 RNF214Q8ND24 703 aa24.62■■□□□ 1.53
FGFR1-223ENST00000496296 MRIQ9BWK5 157 aa24.62■■□□□ 1.53
FGFR1-223ENST00000496296 NCOA5Q9HCD5 579 aaKnown RBP24.62■■□□□ 1.53
FGFR1-223ENST00000496296 RCOR1Q9UKL0 485 aa24.62■■□□□ 1.53
FGFR1-223ENST00000496296 FDPSP14324 419 aaKnown RBP24.61■■□□□ 1.53
FGFR1-223ENST00000496296 IQCA1Q86XH1 822 aa24.61■■□□□ 1.53
FGFR1-223ENST00000496296 TFIP11Q9UBB9 837 aaKnown RBP24.61■■□□□ 1.53
FGFR1-223ENST00000496296 SLC12A7Q9Y666 1083 aa24.61■■□□□ 1.53
FGFR1-223ENST00000496296 CYP2D6P10635 497 aa24.6■■□□□ 1.53
FGFR1-223ENST00000496296 LIG1P18858 919 aa24.6■■□□□ 1.53
FGFR1-223ENST00000496296 SCNN1DP51172 638 aa24.6■■□□□ 1.53
FGFR1-223ENST00000496296 LARGE2Q8N3Y3 721 aa24.6■■□□□ 1.53
FGFR1-223ENST00000496296 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms