RNA–Protein interactions for RNA: ENST00000496152.1

NDUFAF3-206, Transcript of NADH:ubiquinone oxidoreductase complex assembly factor 3, humanhuman

TSL 2

Gene NDUFAF3, Length 826 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3-206ENST00000496152 LHX8Q68G74 356 aa14.88□□□□□ -0.03
NDUFAF3-206ENST00000496152 MRPL50Q8N5N7 158 aaKnown RBP14.88□□□□□ -0.03
NDUFAF3-206ENST00000496152 SSH1Q8WYL5 1049 aa14.88□□□□□ -0.03
NDUFAF3-206ENST00000496152 ASCC2Q9H1I8 757 aaPredicted RBP14.88□□□□□ -0.03
NDUFAF3-206ENST00000496152 MORF4L1Q9UBU8 362 aa14.88□□□□□ -0.03
NDUFAF3-206ENST00000496152 RARSP54136 660 aaKnown RBP14.87□□□□□ -0.03
NDUFAF3-206ENST00000496152 ZNF697Q5TEC3 545 aa14.87□□□□□ -0.03
NDUFAF3-206ENST00000496152 TRMT44Q8IYL2 757 aaKnown RBP14.87□□□□□ -0.03
NDUFAF3-206ENST00000496152 ZNF280CQ8ND82 737 aa14.87□□□□□ -0.03
NDUFAF3-206ENST00000496152 LBHD1Q9BQE6 289 aaPredicted RBP14.87□□□□□ -0.03
NDUFAF3-206ENST00000496152 SEMA6BQ9H3T3 888 aa14.87□□□□□ -0.03
NDUFAF3-206ENST00000496152 SALL1Q9NSC2 1324 aa14.87□□□□□ -0.03
NDUFAF3-206ENST00000496152 ALPK3Q96L96 1907 aa14.86□□□□□ -0.03
NDUFAF3-206ENST00000496152 TTC28Q96AY4 2481 aa14.86□□□□□ -0.03
NDUFAF3-206ENST00000496152 EYA2O00167 538 aa14.86□□□□□ -0.03
NDUFAF3-206ENST00000496152 CACNB2Q08289 660 aaPredicted RBP14.86□□□□□ -0.03
NDUFAF3-206ENST00000496152 MAFAQ8NHW3 353 aaPredicted RBP14.86□□□□□ -0.03
NDUFAF3-206ENST00000496152 FAM163AQ96GL9 167 aaPredicted RBP14.86□□□□□ -0.03
NDUFAF3-206ENST00000496152 YTHDC1Q96MU7 727 aaKnown RBP14.86□□□□□ -0.03
NDUFAF3-206ENST00000496152 NUDT12Q9BQG2 462 aa14.86□□□□□ -0.03
NDUFAF3-206ENST00000496152 DDX4Q9NQI0 724 aaKnown RBP14.86□□□□□ -0.03
NDUFAF3-206ENST00000496152 GNL3LQ9NVN8 582 aaKnown RBP14.86□□□□□ -0.03
NDUFAF3-206ENST00000496152 GAKO14976 1311 aa14.86□□□□□ -0.03
NDUFAF3-206ENST00000496152 MGAMO43451 1857 aa14.85□□□□□ -0.03
NDUFAF3-206ENST00000496152 LAMA2P24043 3122 aaKnown RBP14.85□□□□□ -0.03
NDUFAF3-206ENST00000496152 COL2A1P02458 1487 aaPredicted RBP14.85□□□□□ -0.03
NDUFAF3-206ENST00000496152 HMGCS2P54868 508 aa14.85□□□□□ -0.03
NDUFAF3-206ENST00000496152 SH3D19Q5HYK7 790 aa14.85□□□□□ -0.03
NDUFAF3-206ENST00000496152 SYMPKQ92797 1274 aaKnown RBP14.85□□□□□ -0.03
NDUFAF3-206ENST00000496152 TBC1D2Q9BYX2 928 aa14.85□□□□□ -0.03
NDUFAF3-206ENST00000496152 SEMA3EO15041 775 aa14.84□□□□□ -0.03
NDUFAF3-206ENST00000496152 ZBTB22O15209 634 aa14.84□□□□□ -0.03
NDUFAF3-206ENST00000496152 ZKSCAN1P17029 563 aaPredicted RBP14.84□□□□□ -0.03
NDUFAF3-206ENST00000496152 GPRC5AQ8NFJ5 357 aa14.84□□□□□ -0.03
NDUFAF3-206ENST00000496152 SOCS4Q8WXH5 440 aa14.84□□□□□ -0.03
NDUFAF3-206ENST00000496152 USP6NLQ92738 828 aa14.84□□□□□ -0.03
NDUFAF3-206ENST00000496152 P2RX7Q99572 595 aaKnown RBP14.84□□□□□ -0.03
NDUFAF3-206ENST00000496152 OSBPL5Q9H0X9 879 aaPredicted RBP14.84□□□□□ -0.03
NDUFAF3-206ENST00000496152 DENND2AQ9ULE3 1009 aa14.84□□□□□ -0.03
NDUFAF3-206ENST00000496152 RFX7Q2KHR2 1363 aa14.84□□□□□ -0.03
NDUFAF3-206ENST00000496152 CCND3P30281 292 aaPredicted RBP14.83□□□□□ -0.04
NDUFAF3-206ENST00000496152 RFX5P48382 616 aaPredicted RBP14.83□□□□□ -0.04
NDUFAF3-206ENST00000496152 PICALMQ13492 652 aa14.83□□□□□ -0.04
NDUFAF3-206ENST00000496152 ATG9AQ7Z3C6 839 aa14.83□□□□□ -0.04
NDUFAF3-206ENST00000496152 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.83□□□□□ -0.04
NDUFAF3-206ENST00000496152 USP17L5A8MUK1 530 aa14.82□□□□□ -0.04
NDUFAF3-206ENST00000496152 NPM3O75607 178 aaKnown RBP14.82□□□□□ -0.04
NDUFAF3-206ENST00000496152 COL9A1P20849 921 aa14.82□□□□□ -0.04
NDUFAF3-206ENST00000496152 HOXA7P31268 230 aaPredicted RBP14.82□□□□□ -0.04
NDUFAF3-206ENST00000496152 SLF2Q8IX21 1173 aa14.82□□□□□ -0.04
NDUFAF3-206ENST00000496152 ZGPATQ8N5A5 531 aaKnown RBP14.82□□□□□ -0.04
NDUFAF3-206ENST00000496152 SENP6Q9GZR1 1112 aaPredicted RBP14.82□□□□□ -0.04
NDUFAF3-206ENST00000496152 TXNRD2Q9NNW7 524 aa14.82□□□□□ -0.04
NDUFAF3-206ENST00000496152 SMC4Q9NTJ3 1288 aa14.82□□□□□ -0.04
NDUFAF3-206ENST00000496152 FAM196BA6NMK8 535 aa14.81□□□□□ -0.04
NDUFAF3-206ENST00000496152 PEX10O60683 326 aa14.81□□□□□ -0.04
NDUFAF3-206ENST00000496152 MAPK4P31152 587 aa14.81□□□□□ -0.04
NDUFAF3-206ENST00000496152 CAP2P40123 477 aa14.81□□□□□ -0.04
NDUFAF3-206ENST00000496152 BTDP43251 543 aa14.81□□□□□ -0.04
NDUFAF3-206ENST00000496152 PHKA1P46020 1223 aa14.81□□□□□ -0.04
NDUFAF3-206ENST00000496152 IRX3P78415 501 aaPredicted RBP14.81□□□□□ -0.04
NDUFAF3-206ENST00000496152 PDE3AQ14432 1141 aa14.81□□□□□ -0.04
NDUFAF3-206ENST00000496152 RRP1BQ14684 758 aaKnown RBP14.81□□□□□ -0.04
NDUFAF3-206ENST00000496152 SHHQ15465 462 aa14.81□□□□□ -0.04
NDUFAF3-206ENST00000496152 CCL14Q16627 93 aa14.81□□□□□ -0.04
NDUFAF3-206ENST00000496152 ATP2B3Q16720 1220 aa14.81□□□□□ -0.04
NDUFAF3-206ENST00000496152 Q3C1V9 767 aa14.81□□□□□ -0.04
NDUFAF3-206ENST00000496152 MORN1Q5T089 497 aa14.81□□□□□ -0.04
NDUFAF3-206ENST00000496152 MYLIPQ8WY64 445 aa14.81□□□□□ -0.04
NDUFAF3-206ENST00000496152 RBPJLQ9UBG7 517 aa14.81□□□□□ -0.04
NDUFAF3-206ENST00000496152 PTPRCP08575 1304 aa14.81□□□□□ -0.04
NDUFAF3-206ENST00000496152 DOCK3Q8IZD9 2030 aa14.81□□□□□ -0.04
NDUFAF3-206ENST00000496152 GPR75-ASB3A0A0A6YYF3 556 aa14.8□□□□□ -0.04
NDUFAF3-206ENST00000496152 BCAR3O75815 825 aa14.8□□□□□ -0.04
NDUFAF3-206ENST00000496152 RGS2P41220 211 aa14.8□□□□□ -0.04
NDUFAF3-206ENST00000496152 RHBDL3P58872 404 aa14.8□□□□□ -0.04
NDUFAF3-206ENST00000496152 DZIP1Q86YF9 867 aaKnown RBP14.8□□□□□ -0.04
NDUFAF3-206ENST00000496152 WDR18Q9BV38 432 aa14.8□□□□□ -0.04
NDUFAF3-206ENST00000496152 USP44Q9H0E7 712 aa14.8□□□□□ -0.04
NDUFAF3-206ENST00000496152 TTYH1Q9H313 450 aaPredicted RBP14.8□□□□□ -0.04
NDUFAF3-206ENST00000496152 AS3MTQ9HBK9 375 aa14.8□□□□□ -0.04
NDUFAF3-206ENST00000496152 CEP126Q9P2H0 1117 aa14.8□□□□□ -0.04
NDUFAF3-206ENST00000496152 PRKAG2Q9UGJ0 569 aa14.8□□□□□ -0.04
NDUFAF3-206ENST00000496152 PRUNE2Q8WUY3 3088 aa14.8□□□□□ -0.04
NDUFAF3-206ENST00000496152 ATN1P54259 1190 aaPredicted RBP14.79□□□□□ -0.04
NDUFAF3-206ENST00000496152 HERVK_113P62684 666 aa14.79□□□□□ -0.04
NDUFAF3-206ENST00000496152 SMAD3P84022 425 aaKnown RBP14.79□□□□□ -0.04
NDUFAF3-206ENST00000496152 DDX60LQ5H9U9 1706 aaKnown RBP14.79□□□□□ -0.04
NDUFAF3-206ENST00000496152 SPTY2D1Q68D10 685 aaPredicted RBP14.79□□□□□ -0.04
NDUFAF3-206ENST00000496152 ARHGAP45Q92619 1136 aa14.79□□□□□ -0.04
NDUFAF3-206ENST00000496152 ABCF2Q9UG63 623 aa14.79□□□□□ -0.04
NDUFAF3-206ENST00000496152 FBXO3Q9UK99 471 aa14.79□□□□□ -0.04
NDUFAF3-206ENST00000496152 NOB1Q9ULX3 412 aaKnown RBP14.79□□□□□ -0.04
NDUFAF3-206ENST00000496152 EYSQ5T1H1 3165 aa14.79□□□□□ -0.04
NDUFAF3-206ENST00000496152 MAP4K4O95819 1239 aaPredicted RBP14.78□□□□□ -0.04
NDUFAF3-206ENST00000496152 BACE1P56817 501 aa14.78□□□□□ -0.04
NDUFAF3-206ENST00000496152 C9orf50Q5SZB4 431 aa14.78□□□□□ -0.04
NDUFAF3-206ENST00000496152 CCDC102BQ68D86 513 aa14.78□□□□□ -0.04
NDUFAF3-206ENST00000496152 GPR142Q7Z601 462 aa14.78□□□□□ -0.04
NDUFAF3-206ENST00000496152 PLEKHH3Q7Z736 793 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms