RNA–Protein interactions for RNA: ENST00000495520.5

LINC01558-202, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2 BASIC

Gene LINC01558, Length 1,652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-202ENST00000495520 TCHHQ07283 1943 aa23.47■■□□□ 1.35
LINC01558-202ENST00000495520 ZBTB43O43298 467 aa23.47■■□□□ 1.35
LINC01558-202ENST00000495520 METAP2P50579 478 aaKnown RBP eCLIP23.47■■□□□ 1.35
LINC01558-202ENST00000495520 RASSF7Q02833 373 aa23.47■■□□□ 1.35
LINC01558-202ENST00000495520 SEC23AQ15436 765 aa23.47■■□□□ 1.35
LINC01558-202ENST00000495520 FOXD4L6Q3SYB3 417 aaPredicted RBP23.47■■□□□ 1.35
LINC01558-202ENST00000495520 RRP12Q5JTH9 1297 aaKnown RBP23.47■■□□□ 1.35
LINC01558-202ENST00000495520 FOXD4L3Q6VB84 417 aaPredicted RBP23.47■■□□□ 1.35
LINC01558-202ENST00000495520 SH3RF3Q8TEJ3 882 aaPredicted RBP23.47■■□□□ 1.35
LINC01558-202ENST00000495520 VPS33BQ9H267 617 aa23.47■■□□□ 1.35
LINC01558-202ENST00000495520 FAM217BQ9NTX9 383 aaPredicted RBP23.47■■□□□ 1.35
LINC01558-202ENST00000495520 SLF2Q8IX21 1173 aa23.46■■□□□ 1.35
LINC01558-202ENST00000495520 GDPD2Q9HCC8 539 aa23.46■■□□□ 1.35
LINC01558-202ENST00000495520 H3BQV1 296 aa23.45■■□□□ 1.34
LINC01558-202ENST00000495520 WTAPQ15007 396 aa23.45■■□□□ 1.34
LINC01558-202ENST00000495520 NTRK3Q16288 839 aa23.45■■□□□ 1.34
LINC01558-202ENST00000495520 CSPP1Q1MSJ5 1256 aa23.45■■□□□ 1.34
LINC01558-202ENST00000495520 IFFO2Q5TF58 517 aa23.45■■□□□ 1.34
LINC01558-202ENST00000495520 FERMT3Q86UX7 667 aa23.45■■□□□ 1.34
LINC01558-202ENST00000495520 ISY1Q9ULR0 285 aaKnown RBP23.45■■□□□ 1.34
LINC01558-202ENST00000495520 SLC12A7Q9Y666 1083 aa23.45■■□□□ 1.34
LINC01558-202ENST00000495520 COL4A5P29400 1685 aa23.45■■□□□ 1.34
LINC01558-202ENST00000495520 C12orf60Q5U649 245 aa23.44■■□□□ 1.34
LINC01558-202ENST00000495520 NFXL1Q6ZNB6 911 aa23.44■■□□□ 1.34
LINC01558-202ENST00000495520 NIM1KQ8IY84 436 aa23.44■■□□□ 1.34
LINC01558-202ENST00000495520 NOL10Q9BSC4 688 aaKnown RBP23.44■■□□□ 1.34
LINC01558-202ENST00000495520 TOMM22Q9NS69 142 aa23.44■■□□□ 1.34
LINC01558-202ENST00000495520 MYH2Q9UKX2 1941 aa23.44■■□□□ 1.34
LINC01558-202ENST00000495520 CCDC69A6NI79 296 aa23.44■■□□□ 1.34
LINC01558-202ENST00000495520 YDJCA8MPS7 323 aa23.44■■□□□ 1.34
LINC01558-202ENST00000495520 CPLX1O14810 134 aa23.44■■□□□ 1.34
LINC01558-202ENST00000495520 SLC3A2P08195 630 aaKnown RBP23.44■■□□□ 1.34
LINC01558-202ENST00000495520 CDC27P30260 824 aa23.44■■□□□ 1.34
LINC01558-202ENST00000495520 ADD1P35611 737 aaKnown RBP23.44■■□□□ 1.34
LINC01558-202ENST00000495520 ARHGAP27Q6ZUM4 889 aa23.44■■□□□ 1.34
LINC01558-202ENST00000495520 MXD3Q9BW11 206 aa23.44■■□□□ 1.34
LINC01558-202ENST00000495520 LAMB1P07942 1786 aa23.43■■□□□ 1.34
LINC01558-202ENST00000495520 SRCAPQ6ZRS2 3230 aa23.43■■□□□ 1.34
LINC01558-202ENST00000495520 ROBO3Q96MS0 1386 aa23.43■■□□□ 1.34
LINC01558-202ENST00000495520 LTBP3Q9NS15 1303 aa23.43■■□□□ 1.34
LINC01558-202ENST00000495520 ERICH2A1L162 156 aa23.43■■□□□ 1.34
LINC01558-202ENST00000495520 GADD45BO75293 160 aaPredicted RBP23.43■■□□□ 1.34
LINC01558-202ENST00000495520 CDKL5O76039 1030 aa23.43■■□□□ 1.34
LINC01558-202ENST00000495520 PLCG2P16885 1265 aa23.43■■□□□ 1.34
LINC01558-202ENST00000495520 BTDP43251 543 aa23.43■■□□□ 1.34
LINC01558-202ENST00000495520 KRT85P78386 507 aa23.43■■□□□ 1.34
LINC01558-202ENST00000495520 RAB11FIP4Q86YS3 637 aa23.43■■□□□ 1.34
LINC01558-202ENST00000495520 MCM9Q9NXL9 1143 aa23.43■■□□□ 1.34
LINC01558-202ENST00000495520 ORC3Q9UBD5 711 aaPredicted RBP23.43■■□□□ 1.34
LINC01558-202ENST00000495520 SCN9AQ15858 1988 aa23.43■■□□□ 1.34
LINC01558-202ENST00000495520 ELP1O95163 1332 aa23.42■■□□□ 1.34
LINC01558-202ENST00000495520 USP17L3A6NCW0 530 aa23.42■■□□□ 1.34
LINC01558-202ENST00000495520 USP17L4A6NCW7 530 aa23.42■■□□□ 1.34
LINC01558-202ENST00000495520 CYP2D6P10635 497 aa23.42■■□□□ 1.34
LINC01558-202ENST00000495520 RHBDL3P58872 404 aa23.42■■□□□ 1.34
LINC01558-202ENST00000495520 UBE2HP62256 183 aa23.42■■□□□ 1.34
LINC01558-202ENST00000495520 CPLX2Q6PUV4 134 aaKnown RBP23.42■■□□□ 1.34
LINC01558-202ENST00000495520 USP17L1Q7RTZ2 530 aa23.42■■□□□ 1.34
LINC01558-202ENST00000495520 ZSCAN10Q96SZ4 725 aaPredicted RBP23.42■■□□□ 1.34
LINC01558-202ENST00000495520 UBAC1Q9BSL1 405 aa23.42■■□□□ 1.34
LINC01558-202ENST00000495520 GOLGA8AA7E2F4 631 aa23.41■■□□□ 1.34
LINC01558-202ENST00000495520 USP17L8P0C7I0 530 aa23.41■■□□□ 1.34
LINC01558-202ENST00000495520 USP5P45974 858 aa23.41■■□□□ 1.34
LINC01558-202ENST00000495520 ZNF445P59923 1031 aa23.41■■□□□ 1.34
LINC01558-202ENST00000495520 EVX2Q03828 476 aa23.41■■□□□ 1.34
LINC01558-202ENST00000495520 STRIP1Q5VSL9 837 aa23.41■■□□□ 1.34
LINC01558-202ENST00000495520 SYNE3Q6ZMZ3 975 aa23.41■■□□□ 1.34
LINC01558-202ENST00000495520 MICU3Q86XE3 530 aa23.41■■□□□ 1.34
LINC01558-202ENST00000495520 STK11IPQ8N1F8 1099 aa23.41■■□□□ 1.34
LINC01558-202ENST00000495520 CERS5Q8N5B7 392 aa23.41■■□□□ 1.34
LINC01558-202ENST00000495520 JDP2Q8WYK2 163 aa23.41■■□□□ 1.34
LINC01558-202ENST00000495520 ZKSCAN3Q9BRR0 538 aa23.41■■□□□ 1.34
LINC01558-202ENST00000495520 TNKSO95271 1327 aa23.41■■□□□ 1.34
LINC01558-202ENST00000495520 YBX3P16989 372 aaKnown RBP eCLIP23.41■■□□□ 1.34
LINC01558-202ENST00000495520 CAVIN1Q6NZI2 390 aaKnown RBP23.41■■□□□ 1.34
LINC01558-202ENST00000495520 ENAHQ8N8S7 591 aaPredicted RBP23.41■■□□□ 1.34
LINC01558-202ENST00000495520 FBXO18Q8NFZ0 1043 aa23.41■■□□□ 1.34
LINC01558-202ENST00000495520 STK36Q9NRP7 1315 aa23.4■■□□□ 1.34
LINC01558-202ENST00000495520 F8W031 263 aaPredicted RBP23.4■■□□□ 1.34
LINC01558-202ENST00000495520 FIBPO43427 364 aa23.4■■□□□ 1.34
LINC01558-202ENST00000495520 NCLP19338 710 aaKnown RBP23.4■■□□□ 1.34
LINC01558-202ENST00000495520 PDE4BQ07343 736 aa23.4■■□□□ 1.34
LINC01558-202ENST00000495520 PPP2R5BQ15173 497 aa23.4■■□□□ 1.34
LINC01558-202ENST00000495520 FAM173BQ6P4H8 233 aa23.4■■□□□ 1.34
LINC01558-202ENST00000495520 SCAND2PQ9GZW5 306 aaPredicted RBP23.4■■□□□ 1.34
LINC01558-202ENST00000495520 ZNRF3Q9ULT6 936 aa23.4■■□□□ 1.34
LINC01558-202ENST00000495520 RANBP6O60518 1105 aaKnown RBP23.39■■□□□ 1.34
LINC01558-202ENST00000495520 RAD17O75943 681 aa23.39■■□□□ 1.34
LINC01558-202ENST00000495520 IFNAR1P17181 557 aa23.39■■□□□ 1.34
LINC01558-202ENST00000495520 RXRAP19793 462 aa23.39■■□□□ 1.34
LINC01558-202ENST00000495520 FKBP1AP62942 108 aaKnown RBP23.39■■□□□ 1.34
LINC01558-202ENST00000495520 DACT2Q5SW24 774 aa23.39■■□□□ 1.34
LINC01558-202ENST00000495520 ATL3Q6DD88 541 aa23.39■■□□□ 1.34
LINC01558-202ENST00000495520 IQCA1Q86XH1 822 aa23.39■■□□□ 1.34
LINC01558-202ENST00000495520 TGFBRAP1Q8WUH2 860 aa23.39■■□□□ 1.34
LINC01558-202ENST00000495520 TMEM63CQ9P1W3 806 aa23.39■■□□□ 1.34
LINC01558-202ENST00000495520 PRDM1O75626 825 aa23.38■■□□□ 1.33
LINC01558-202ENST00000495520 PRELPP51888 382 aa23.38■■□□□ 1.33
LINC01558-202ENST00000495520 ZSCAN23Q3MJ62 389 aa23.38■■□□□ 1.33
LINC01558-202ENST00000495520 TTC6Q86TZ1 520 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms