RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 ALDH1A1P00352 501 aa17.83■□□□□ 0.44
ATG4B-224ENST00000494132 USP5P45974 858 aa17.83■□□□□ 0.44
ATG4B-224ENST00000494132 MAP3K10Q02779 954 aa17.83■□□□□ 0.44
ATG4B-224ENST00000494132 RRP1BQ14684 758 aaKnown RBP17.83■□□□□ 0.44
ATG4B-224ENST00000494132 RIOK1Q9BRS2 568 aaKnown RBP17.83■□□□□ 0.44
ATG4B-224ENST00000494132 ECHDC1Q9NTX5 307 aa17.83■□□□□ 0.44
ATG4B-224ENST00000494132 MAGEB6P1A0A0J9YX57 407 aa17.82■□□□□ 0.44
ATG4B-224ENST00000494132 TCRBV5S4A2TA0A5A2 114 aa17.82■□□□□ 0.44
ATG4B-224ENST00000494132 CETPP11597 493 aa17.82■□□□□ 0.44
ATG4B-224ENST00000494132 SNAPC2Q13487 334 aa17.82■□□□□ 0.44
ATG4B-224ENST00000494132 TAF1CQ15572 869 aaPredicted RBP17.82■□□□□ 0.44
ATG4B-224ENST00000494132 OTUD7BQ6GQQ9 843 aa17.82■□□□□ 0.44
ATG4B-224ENST00000494132 PICK1Q9NRD5 415 aa17.82■□□□□ 0.44
ATG4B-224ENST00000494132 ZHX2Q9Y6X8 837 aa17.82■□□□□ 0.44
ATG4B-224ENST00000494132 BTBD19C9JJ37 291 aa17.81■□□□□ 0.44
ATG4B-224ENST00000494132 TBC1D12O60347 775 aa17.81■□□□□ 0.44
ATG4B-224ENST00000494132 IGSF3O75054 1194 aa17.81■□□□□ 0.44
ATG4B-224ENST00000494132 IRX6P78412 446 aaPredicted RBP17.81■□□□□ 0.44
ATG4B-224ENST00000494132 LCORLQ8N3X6 602 aa17.81■□□□□ 0.44
ATG4B-224ENST00000494132 ABHD8Q96I13 439 aa17.81■□□□□ 0.44
ATG4B-224ENST00000494132 CFHR5Q9BXR6 569 aa17.81■□□□□ 0.44
ATG4B-224ENST00000494132 DNAJC18Q9H819 358 aa17.81■□□□□ 0.44
ATG4B-224ENST00000494132 PI4KBQ9UBF8 816 aa17.81■□□□□ 0.44
ATG4B-224ENST00000494132 FKTNO75072 461 aa17.8■□□□□ 0.44
ATG4B-224ENST00000494132 PTPRAP18433 802 aa17.8■□□□□ 0.44
ATG4B-224ENST00000494132 ADD2P35612 726 aa17.8■□□□□ 0.44
ATG4B-224ENST00000494132 SHROOM1Q2M3G4 852 aaPredicted RBP17.8■□□□□ 0.44
ATG4B-224ENST00000494132 CRACR2BQ8N4Y2 399 aaPredicted RBP17.8■□□□□ 0.44
ATG4B-224ENST00000494132 SDR42E1Q8WUS8 393 aa17.8■□□□□ 0.44
ATG4B-224ENST00000494132 DHX36Q9H2U1 1008 aaKnown RBP17.8■□□□□ 0.44
ATG4B-224ENST00000494132 ARMT1Q9H993 441 aa17.8■□□□□ 0.44
ATG4B-224ENST00000494132 KCNH4Q9UQ05 1017 aa17.8■□□□□ 0.44
ATG4B-224ENST00000494132 CTNND1O60716 968 aaKnown RBP17.79■□□□□ 0.44
ATG4B-224ENST00000494132 EVX2Q03828 476 aa17.79■□□□□ 0.44
ATG4B-224ENST00000494132 ANKRD45Q5TZF3 282 aa17.79■□□□□ 0.44
ATG4B-224ENST00000494132 GPATCH3Q96I76 525 aa17.79■□□□□ 0.44
ATG4B-224ENST00000494132 HERC5Q9UII4 1024 aaKnown RBP17.79■□□□□ 0.44
ATG4B-224ENST00000494132 TRIM75PA6NK02 468 aa17.78■□□□□ 0.44
ATG4B-224ENST00000494132 ECM2O94769 699 aaPredicted RBP17.78■□□□□ 0.44
ATG4B-224ENST00000494132 MBD4O95243 580 aa17.78■□□□□ 0.44
ATG4B-224ENST00000494132 GDF11O95390 407 aa17.78■□□□□ 0.44
ATG4B-224ENST00000494132 HLA-DOAP06340 250 aa17.78■□□□□ 0.44
ATG4B-224ENST00000494132 MOGSQ13724 837 aa17.78■□□□□ 0.44
ATG4B-224ENST00000494132 CTU1Q7Z7A3 348 aaKnown RBP17.78■□□□□ 0.44
ATG4B-224ENST00000494132 TRIM34Q9BYJ4 488 aa17.78■□□□□ 0.44
ATG4B-224ENST00000494132 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.78■□□□□ 0.44
ATG4B-224ENST00000494132 LOC285556D6RIA3 1793 aa17.78■□□□□ 0.44
ATG4B-224ENST00000494132 PRKAB2O43741 272 aa17.77■□□□□ 0.44
ATG4B-224ENST00000494132 CAP2P40123 477 aa17.77■□□□□ 0.44
ATG4B-224ENST00000494132 JAG1P78504 1218 aa17.77■□□□□ 0.44
ATG4B-224ENST00000494132 HDAC1Q13547 482 aaPredicted RBP17.77■□□□□ 0.44
ATG4B-224ENST00000494132 GADL1Q6ZQY3 521 aa17.77■□□□□ 0.44
ATG4B-224ENST00000494132 CD99L2Q8TCZ2 262 aa17.77■□□□□ 0.44
ATG4B-224ENST00000494132 CRNKL1Q9BZJ0 848 aaKnown RBP17.77■□□□□ 0.44
ATG4B-224ENST00000494132 ZFYVE28Q9HCC9 887 aa17.77■□□□□ 0.44
ATG4B-224ENST00000494132 AFG3L2Q9Y4W6 797 aa17.77■□□□□ 0.44
ATG4B-224ENST00000494132 MGAMO43451 1857 aa17.76■□□□□ 0.43
ATG4B-224ENST00000494132 CCDC85CA6NKD9 419 aa17.76■□□□□ 0.43
ATG4B-224ENST00000494132 PLCD1P51178 756 aa17.76■□□□□ 0.43
ATG4B-224ENST00000494132 CAP1Q01518 475 aa17.76■□□□□ 0.43
ATG4B-224ENST00000494132 NOM1Q5C9Z4 860 aaKnown RBP17.76■□□□□ 0.43
ATG4B-224ENST00000494132 CERS3Q8IU89 383 aa17.76■□□□□ 0.43
ATG4B-224ENST00000494132 PI4K2BQ8TCG2 481 aa17.76■□□□□ 0.43
ATG4B-224ENST00000494132 ZBTB47Q9UFB7 747 aaPredicted RBP17.76■□□□□ 0.43
ATG4B-224ENST00000494132 A0A0G2JLL6 359 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-224ENST00000494132 PDHXO00330 501 aa17.75■□□□□ 0.43
ATG4B-224ENST00000494132 CXCL11O14625 94 aa17.75■□□□□ 0.43
ATG4B-224ENST00000494132 IGHDP01880 384 aa17.75■□□□□ 0.43
ATG4B-224ENST00000494132 CYP2D6P10635 497 aa17.75■□□□□ 0.43
ATG4B-224ENST00000494132 MX1P20591 662 aa17.75■□□□□ 0.43
ATG4B-224ENST00000494132 B4GALNT3Q6L9W6 998 aa17.75■□□□□ 0.43
ATG4B-224ENST00000494132 TMED8Q6PL24 325 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-224ENST00000494132 PRRT2Q7Z6L0 340 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-224ENST00000494132 FOXP4Q8IVH2 680 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-224ENST00000494132 GCC1Q96CN9 775 aa17.75■□□□□ 0.43
ATG4B-224ENST00000494132 PUS7LQ9H0K6 701 aaKnown RBP17.75■□□□□ 0.43
ATG4B-224ENST00000494132 MCM9Q9NXL9 1143 aa17.75■□□□□ 0.43
ATG4B-224ENST00000494132 TTC41PQ6P2S7 1318 aa17.74■□□□□ 0.43
ATG4B-224ENST00000494132 POLR3DP05423 398 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-224ENST00000494132 SP3Q02447 781 aa17.74■□□□□ 0.43
ATG4B-224ENST00000494132 SPP2Q13103 211 aa17.74■□□□□ 0.43
ATG4B-224ENST00000494132 UBE3CQ15386 1083 aa17.74■□□□□ 0.43
ATG4B-224ENST00000494132 GPAT2Q6NUI2 795 aa17.74■□□□□ 0.43
ATG4B-224ENST00000494132 ANKRD23Q86SG2 305 aa17.74■□□□□ 0.43
ATG4B-224ENST00000494132 KBTBD3Q8NAB2 608 aa17.74■□□□□ 0.43
ATG4B-224ENST00000494132 LNPKQ9C0E8 428 aa17.74■□□□□ 0.43
ATG4B-224ENST00000494132 DCP1AQ9NPI6 582 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-224ENST00000494132 CPA4Q9UI42 421 aa17.74■□□□□ 0.43
ATG4B-224ENST00000494132 SALL3Q9BXA9 1300 aa17.73■□□□□ 0.43
ATG4B-224ENST00000494132 SMIM22K7EJ46 135 aa17.73■□□□□ 0.43
ATG4B-224ENST00000494132 CYP2C8P10632 490 aa17.73■□□□□ 0.43
ATG4B-224ENST00000494132 ZSCAN25Q6NSZ9 544 aa17.73■□□□□ 0.43
ATG4B-224ENST00000494132 TTC6Q86TZ1 520 aa17.73■□□□□ 0.43
ATG4B-224ENST00000494132 METTL16Q86W50 562 aaKnown RBP17.73■□□□□ 0.43
ATG4B-224ENST00000494132 SERPINB13Q9UIV8 391 aa17.73■□□□□ 0.43
ATG4B-224ENST00000494132 ZBTB21Q9ULJ3 1066 aa17.73■□□□□ 0.43
ATG4B-224ENST00000494132 TRIM17Q9Y577 477 aa17.73■□□□□ 0.43
ATG4B-224ENST00000494132 CYP2D7A0A087X1C5 515 aa17.72■□□□□ 0.43
ATG4B-224ENST00000494132 USP17L5A8MUK1 530 aa17.72■□□□□ 0.43
ATG4B-224ENST00000494132 ERC2O15083 957 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms