RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 FAM198AQ9UFP1 575 aa14.8□□□□□ -0.04
SNX17-208ENST00000493711 POLR3DP05423 398 aaPredicted RBP14.79□□□□□ -0.04
SNX17-208ENST00000493711 PCP11498 1178 aaKnown RBP14.79□□□□□ -0.04
SNX17-208ENST00000493711 ZKSCAN1P17029 563 aaPredicted RBP14.79□□□□□ -0.04
SNX17-208ENST00000493711 PTH1RQ03431 593 aa14.79□□□□□ -0.04
SNX17-208ENST00000493711 NFIAQ12857 509 aa14.79□□□□□ -0.04
SNX17-208ENST00000493711 CCDC88AQ3V6T2 1871 aa14.79□□□□□ -0.04
SNX17-208ENST00000493711 USP26Q9BXU7 913 aa14.79□□□□□ -0.04
SNX17-208ENST00000493711 RBM8AQ9Y5S9 174 aaKnown RBP14.79□□□□□ -0.04
SNX17-208ENST00000493711 ATRNL1Q5VV63 1379 aa14.78□□□□□ -0.04
SNX17-208ENST00000493711 USP17L12C9JPN9 530 aa14.78□□□□□ -0.04
SNX17-208ENST00000493711 USP17L21D6R901 530 aa14.78□□□□□ -0.04
SNX17-208ENST00000493711 ZNF213O14771 459 aa14.78□□□□□ -0.04
SNX17-208ENST00000493711 FOXP2O15409 715 aa14.78□□□□□ -0.04
SNX17-208ENST00000493711 PYGBP11216 843 aa14.78□□□□□ -0.04
SNX17-208ENST00000493711 CACNB3P54284 484 aa14.78□□□□□ -0.04
SNX17-208ENST00000493711 RASA3Q14644 834 aa14.78□□□□□ -0.04
SNX17-208ENST00000493711 C12orf60Q5U649 245 aa14.78□□□□□ -0.04
SNX17-208ENST00000493711 CTR9Q6PD62 1173 aa14.78□□□□□ -0.04
SNX17-208ENST00000493711 CDC37L1Q7L3B6 337 aa14.78□□□□□ -0.04
SNX17-208ENST00000493711 FOXP4Q8IVH2 680 aaPredicted RBP14.78□□□□□ -0.04
SNX17-208ENST00000493711 ZSCAN29Q8IWY8 852 aaPredicted RBP14.78□□□□□ -0.04
SNX17-208ENST00000493711 DEFB129Q9H1M3 183 aa14.78□□□□□ -0.04
SNX17-208ENST00000493711 EHD4Q9H223 541 aa14.78□□□□□ -0.04
SNX17-208ENST00000493711 EPB41L4AQ9HCS5 686 aaPredicted RBP14.78□□□□□ -0.04
SNX17-208ENST00000493711 DDX4Q9NQI0 724 aaKnown RBP14.78□□□□□ -0.04
SNX17-208ENST00000493711 PI4KBQ9UBF8 816 aa14.78□□□□□ -0.04
SNX17-208ENST00000493711 ANAPC4Q9UJX5 808 aa14.78□□□□□ -0.04
SNX17-208ENST00000493711 TCP10Q12799 353 aa14.77□□□□□ -0.05
SNX17-208ENST00000493711 SUPT20HL1Q3ZLR7 823 aa14.77□□□□□ -0.05
SNX17-208ENST00000493711 KRT26Q7Z3Y9 468 aa14.77□□□□□ -0.05
SNX17-208ENST00000493711 TRIM34Q9BYJ4 488 aa14.77□□□□□ -0.05
SNX17-208ENST00000493711 RNF41Q9H4P4 317 aaPredicted RBP14.77□□□□□ -0.05
SNX17-208ENST00000493711 CNTNAP1P78357 1384 aa14.76□□□□□ -0.05
SNX17-208ENST00000493711 SCN4AP35499 1836 aa14.76□□□□□ -0.05
SNX17-208ENST00000493711 NF2P35240 595 aa14.76□□□□□ -0.05
SNX17-208ENST00000493711 PDE4BQ07343 736 aa14.76□□□□□ -0.05
SNX17-208ENST00000493711 PPARAQ07869 468 aa14.76□□□□□ -0.05
SNX17-208ENST00000493711 KRT32Q14532 448 aa14.76□□□□□ -0.05
SNX17-208ENST00000493711 NECTIN1Q15223 517 aa14.76□□□□□ -0.05
SNX17-208ENST00000493711 CSRNP1Q96S65 589 aa14.76□□□□□ -0.05
SNX17-208ENST00000493711 SWAP70Q9UH65 585 aa14.76□□□□□ -0.05
SNX17-208ENST00000493711 SAP30BPQ9UHR5 308 aaKnown RBP14.76□□□□□ -0.05
SNX17-208ENST00000493711 HERC5Q9UII4 1024 aaKnown RBP14.76□□□□□ -0.05
SNX17-208ENST00000493711 PALD1Q9ULE6 856 aa14.76□□□□□ -0.05
SNX17-208ENST00000493711 PCDHB13Q9Y5F0 798 aa14.76□□□□□ -0.05
SNX17-208ENST00000493711 ASTN2O75129 1339 aaPredicted RBP14.75□□□□□ -0.05
SNX17-208ENST00000493711 MINDY4BA8MYZ0 360 aa14.75□□□□□ -0.05
SNX17-208ENST00000493711 ATMINO43313 823 aaPredicted RBP14.75□□□□□ -0.05
SNX17-208ENST00000493711 TBC1D12O60347 775 aa14.75□□□□□ -0.05
SNX17-208ENST00000493711 HSPA4P34932 840 aa14.75□□□□□ -0.05
SNX17-208ENST00000493711 ANAPC15P60006 121 aa14.75□□□□□ -0.05
SNX17-208ENST00000493711 TSGA10IPQ3SY00 556 aa14.75□□□□□ -0.05
SNX17-208ENST00000493711 DCAF15Q66K64 600 aa14.75□□□□□ -0.05
SNX17-208ENST00000493711 CREB3L3Q68CJ9 461 aa14.75□□□□□ -0.05
SNX17-208ENST00000493711 CRACR2BQ8N4Y2 399 aaPredicted RBP14.75□□□□□ -0.05
SNX17-208ENST00000493711 IL27Q8NEV9 243 aa14.75□□□□□ -0.05
SNX17-208ENST00000493711 KCNB2Q92953 911 aa14.75□□□□□ -0.05
SNX17-208ENST00000493711 CNNM2Q9H8M5 875 aa14.75□□□□□ -0.05
SNX17-208ENST00000493711 SERPINB13Q9UIV8 391 aa14.75□□□□□ -0.05
SNX17-208ENST00000493711 ROBO3Q96MS0 1386 aa14.74□□□□□ -0.05
SNX17-208ENST00000493711 SLC27A2O14975 620 aa14.74□□□□□ -0.05
SNX17-208ENST00000493711 SEC24BO95487 1268 aa14.74□□□□□ -0.05
SNX17-208ENST00000493711 TRDNQ13061 729 aa14.74□□□□□ -0.05
SNX17-208ENST00000493711 ASTLQ6HA08 431 aaPredicted RBP14.74□□□□□ -0.05
SNX17-208ENST00000493711 METTL16Q86W50 562 aaKnown RBP14.74□□□□□ -0.05
SNX17-208ENST00000493711 TMEM39BQ9GZU3 492 aa14.74□□□□□ -0.05
SNX17-208ENST00000493711 MYH7P12883 1935 aa14.74□□□□□ -0.05
SNX17-208ENST00000493711 AK9Q5TCS8 1911 aa14.74□□□□□ -0.05
SNX17-208ENST00000493711 MYH2Q9UKX2 1941 aa14.74□□□□□ -0.05
SNX17-208ENST00000493711 DDTLA6NHG4 134 aaPredicted RBP14.73□□□□□ -0.05
SNX17-208ENST00000493711 CYP21A2P08686 494 aa14.73□□□□□ -0.05
SNX17-208ENST00000493711 MAP3K10Q02779 954 aa14.73□□□□□ -0.05
SNX17-208ENST00000493711 AKNAD1Q5T1N1 836 aa14.73□□□□□ -0.05
SNX17-208ENST00000493711 MFSD6Q6ZSS7 791 aa14.73□□□□□ -0.05
SNX17-208ENST00000493711 C16orf86Q6ZW13 317 aa14.73□□□□□ -0.05
SNX17-208ENST00000493711 SH3BP5LQ7L8J4 393 aa14.73□□□□□ -0.05
SNX17-208ENST00000493711 USP48Q86UV5 1035 aa14.73□□□□□ -0.05
SNX17-208ENST00000493711 IFNL1Q8IU54 200 aa14.73□□□□□ -0.05
SNX17-208ENST00000493711 ZFPM1Q8IX07 1006 aa14.73□□□□□ -0.05
SNX17-208ENST00000493711 STAG1Q8WVM7 1258 aa14.73□□□□□ -0.05
SNX17-208ENST00000493711 TEPSINQ96N21 525 aa14.73□□□□□ -0.05
SNX17-208ENST00000493711 C22orf23Q9BZE7 217 aa14.73□□□□□ -0.05
SNX17-208ENST00000493711 KRT23Q9C075 422 aa14.73□□□□□ -0.05
SNX17-208ENST00000493711 BMP2KQ9NSY1 1161 aaPredicted RBP14.73□□□□□ -0.05
SNX17-208ENST00000493711 ORC4O43929 436 aa14.72□□□□□ -0.05
SNX17-208ENST00000493711 HMGB1P09429 215 aaKnown RBP14.72□□□□□ -0.05
SNX17-208ENST00000493711 FGRP09769 529 aa14.72□□□□□ -0.05
SNX17-208ENST00000493711 HSPA1AP0DMV8 641 aaKnown RBP14.72□□□□□ -0.05
SNX17-208ENST00000493711 HSPA1BP0DMV9 641 aaKnown RBP14.72□□□□□ -0.05
SNX17-208ENST00000493711 PSMA5P28066 241 aa14.72□□□□□ -0.05
SNX17-208ENST00000493711 RBM25P49756 843 aaKnown RBP14.72□□□□□ -0.05
SNX17-208ENST00000493711 PLCD1P51178 756 aa14.72□□□□□ -0.05
SNX17-208ENST00000493711 LHX8Q68G74 356 aa14.72□□□□□ -0.05
SNX17-208ENST00000493711 SPOCK2Q92563 424 aa14.72□□□□□ -0.05
SNX17-208ENST00000493711 CCDC17Q96LX7 622 aa14.72□□□□□ -0.05
SNX17-208ENST00000493711 MKNK2Q9HBH9 465 aa14.72□□□□□ -0.05
SNX17-208ENST00000493711 GINM1Q9NU53 330 aa14.72□□□□□ -0.05
SNX17-208ENST00000493711 SLC34A2O95436 690 aa14.71□□□□□ -0.05
SNX17-208ENST00000493711 CYP2D6P10635 497 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms