RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 API5Q9BZZ5 524 aaKnown RBP16.96■□□□□ 0.31
SAMM50-204ENST00000493161 CRISPLD2Q9H0B8 497 aa16.96■□□□□ 0.31
SAMM50-204ENST00000493161 STAP2Q9UGK3 403 aa16.96■□□□□ 0.31
SAMM50-204ENST00000493161 HMGCS2P54868 508 aa16.95■□□□□ 0.3
SAMM50-204ENST00000493161 TRIM32Q13049 653 aa16.95■□□□□ 0.3
SAMM50-204ENST00000493161 MVPQ14764 893 aaKnown RBP16.95■□□□□ 0.3
SAMM50-204ENST00000493161 FAM110CQ1W6H9 321 aa16.95■□□□□ 0.3
SAMM50-204ENST00000493161 DOCK3Q8IZD9 2030 aa16.95■□□□□ 0.3
SAMM50-204ENST00000493161 ALPK3Q96L96 1907 aa16.94■□□□□ 0.3
SAMM50-204ENST00000493161 PEX10O60683 326 aa16.94■□□□□ 0.3
SAMM50-204ENST00000493161 NPM3O75607 178 aaKnown RBP16.94■□□□□ 0.3
SAMM50-204ENST00000493161 SPATA5Q8NB90 893 aa16.94■□□□□ 0.3
SAMM50-204ENST00000493161 PROCA1Q8NCQ7 364 aaPredicted RBP16.94■□□□□ 0.3
SAMM50-204ENST00000493161 ZNF280CQ8ND82 737 aa16.94■□□□□ 0.3
SAMM50-204ENST00000493161 LRCH3Q96II8 777 aa16.94■□□□□ 0.3
SAMM50-204ENST00000493161 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.94■□□□□ 0.3
SAMM50-204ENST00000493161 OSBPL5Q9H0X9 879 aaPredicted RBP16.94■□□□□ 0.3
SAMM50-204ENST00000493161 AKAP2Q9Y2D5 859 aa16.94■□□□□ 0.3
SAMM50-204ENST00000493161 LOC285556D6RIA3 1793 aa16.94■□□□□ 0.3
SAMM50-204ENST00000493161 CAP2P40123 477 aa16.93■□□□□ 0.3
SAMM50-204ENST00000493161 RARSP54136 660 aaKnown RBP16.93■□□□□ 0.3
SAMM50-204ENST00000493161 JAG1P78504 1218 aa16.93■□□□□ 0.3
SAMM50-204ENST00000493161 ASCC2Q9H1I8 757 aaPredicted RBP16.93■□□□□ 0.3
SAMM50-204ENST00000493161 RAI14Q9P0K7 980 aa16.93■□□□□ 0.3
SAMM50-204ENST00000493161 GJD2Q9UKL4 321 aa16.93■□□□□ 0.3
SAMM50-204ENST00000493161 PNMA3Q9UL41 463 aa16.93■□□□□ 0.3
SAMM50-204ENST00000493161 HDAC5Q9UQL6 1122 aa16.93■□□□□ 0.3
SAMM50-204ENST00000493161 TNNQ9UQP3 1299 aa16.93■□□□□ 0.3
SAMM50-204ENST00000493161 ATAD5Q96QE3 1844 aa16.92■□□□□ 0.3
SAMM50-204ENST00000493161 MTX1Q13505 466 aa16.92■□□□□ 0.3
SAMM50-204ENST00000493161 SHROOM1Q2M3G4 852 aaPredicted RBP16.92■□□□□ 0.3
SAMM50-204ENST00000493161 SH3RF3Q8TEJ3 882 aaPredicted RBP16.92■□□□□ 0.3
SAMM50-204ENST00000493161 LAMA3Q16787 3333 aa16.91■□□□□ 0.3
SAMM50-204ENST00000493161 USP17L5A8MUK1 530 aa16.91■□□□□ 0.3
SAMM50-204ENST00000493161 CT47B1P0C2W7 299 aaPredicted RBP16.91■□□□□ 0.3
SAMM50-204ENST00000493161 ARID4AP29374 1257 aaPredicted RBP16.91■□□□□ 0.3
SAMM50-204ENST00000493161 MCAMP43121 646 aa16.91■□□□□ 0.3
SAMM50-204ENST00000493161 MNX1P50219 401 aaPredicted RBP16.91■□□□□ 0.3
SAMM50-204ENST00000493161 GSTO1P78417 241 aa16.91■□□□□ 0.3
SAMM50-204ENST00000493161 TEX11Q8IYF3 940 aa16.91■□□□□ 0.3
SAMM50-204ENST00000493161 COL2A1P02458 1487 aaPredicted RBP16.91■□□□□ 0.3
SAMM50-204ENST00000493161 PLXNB2O15031 1838 aa16.91■□□□□ 0.3
SAMM50-204ENST00000493161 SIPA1L1O43166 1804 aa16.91■□□□□ 0.3
SAMM50-204ENST00000493161 PNMA6EA0A0J9YXQ4 647 aa16.9■□□□□ 0.3
SAMM50-204ENST00000493161 HMGCRP04035 888 aa16.9■□□□□ 0.3
SAMM50-204ENST00000493161 LDHCP07864 332 aa16.9■□□□□ 0.3
SAMM50-204ENST00000493161 GNAI3P08754 354 aa16.9■□□□□ 0.3
SAMM50-204ENST00000493161 GCLCP48506 637 aaPredicted RBP16.9■□□□□ 0.3
SAMM50-204ENST00000493161 SH3D19Q5HYK7 790 aa16.9■□□□□ 0.3
SAMM50-204ENST00000493161 GORABQ5T7V8 394 aa16.9■□□□□ 0.3
SAMM50-204ENST00000493161 NECAB2Q7Z6G3 386 aa16.9■□□□□ 0.3
SAMM50-204ENST00000493161 C7orf61Q8IZ16 206 aa16.9■□□□□ 0.3
SAMM50-204ENST00000493161 SNRKQ9NRH2 765 aa16.9■□□□□ 0.3
SAMM50-204ENST00000493161 ZMYND8Q9ULU4 1186 aaPredicted RBP16.9■□□□□ 0.3
SAMM50-204ENST00000493161 MTMR2Q13614 643 aa16.89■□□□□ 0.29
SAMM50-204ENST00000493161 TRIB2Q92519 343 aa16.89■□□□□ 0.29
SAMM50-204ENST00000493161 DNAJC18Q9H819 358 aa16.89■□□□□ 0.29
SAMM50-204ENST00000493161 TXNRD2Q9NNW7 524 aa16.89■□□□□ 0.29
SAMM50-204ENST00000493161 COL6A3P12111 3177 aa16.88■□□□□ 0.29
SAMM50-204ENST00000493161 A0A1W2PPC1 479 aa16.88■□□□□ 0.29
SAMM50-204ENST00000493161 MAP4K4O95819 1239 aaPredicted RBP16.88■□□□□ 0.29
SAMM50-204ENST00000493161 ADGRA1Q86SQ6 560 aa16.88■□□□□ 0.29
SAMM50-204ENST00000493161 ARHGAP45Q92619 1136 aa16.88■□□□□ 0.29
SAMM50-204ENST00000493161 P2RX7Q99572 595 aaKnown RBP16.88■□□□□ 0.29
SAMM50-204ENST00000493161 GDF15Q99988 308 aa16.88■□□□□ 0.29
SAMM50-204ENST00000493161 HMX1Q9NP08 348 aaPredicted RBP16.88■□□□□ 0.29
SAMM50-204ENST00000493161 AATFQ9NY61 560 aaKnown RBP eCLIP16.88■□□□□ 0.29
SAMM50-204ENST00000493161 LRP2BPQ9P2M1 347 aa16.88■□□□□ 0.29
SAMM50-204ENST00000493161 MORF4L1Q9UBU8 362 aa16.88■□□□□ 0.29
SAMM50-204ENST00000493161 RPTORQ8N122 1335 aa16.88■□□□□ 0.29
SAMM50-204ENST00000493161 SYN1P17600 705 aa16.87■□□□□ 0.29
SAMM50-204ENST00000493161 CAPN2P17655 700 aa16.87■□□□□ 0.29
SAMM50-204ENST00000493161 CYP2B6P20813 491 aa16.87■□□□□ 0.29
SAMM50-204ENST00000493161 BACE1P56817 501 aa16.87■□□□□ 0.29
SAMM50-204ENST00000493161 PABPC4Q13310 644 aaKnown RBP eCLIP16.87■□□□□ 0.29
SAMM50-204ENST00000493161 POTEEQ6S8J3 1075 aa16.87■□□□□ 0.29
SAMM50-204ENST00000493161 MAPKAPK5Q8IW41 473 aa16.87■□□□□ 0.29
SAMM50-204ENST00000493161 WDR18Q9BV38 432 aa16.87■□□□□ 0.29
SAMM50-204ENST00000493161 TBC1D2Q9BYX2 928 aa16.87■□□□□ 0.29
SAMM50-204ENST00000493161 PI4KBQ9UBF8 816 aa16.87■□□□□ 0.29
SAMM50-204ENST00000493161 HERC5Q9UII4 1024 aaKnown RBP16.87■□□□□ 0.29
SAMM50-204ENST00000493161 DDX60LQ5H9U9 1706 aaKnown RBP16.87■□□□□ 0.29
SAMM50-204ENST00000493161 TRIM27P14373 513 aa16.86■□□□□ 0.29
SAMM50-204ENST00000493161 ANKLE1Q8NAG6 615 aa16.86■□□□□ 0.29
SAMM50-204ENST00000493161 SLC17A8Q8NDX2 589 aa16.86■□□□□ 0.29
SAMM50-204ENST00000493161 TGFBRAP1Q8WUH2 860 aa16.86■□□□□ 0.29
SAMM50-204ENST00000493161 NBPF3Q9H094 633 aa16.86■□□□□ 0.29
SAMM50-204ENST00000493161 AS3MTQ9HBK9 375 aa16.86■□□□□ 0.29
SAMM50-204ENST00000493161 PALD1Q9ULE6 856 aa16.86■□□□□ 0.29
SAMM50-204ENST00000493161 GDF11O95390 407 aa16.85■□□□□ 0.29
SAMM50-204ENST00000493161 GNAI2P04899 355 aa16.85■□□□□ 0.29
SAMM50-204ENST00000493161 UQCRFS1P1P0C7P4 283 aa16.85■□□□□ 0.29
SAMM50-204ENST00000493161 HOXA7P31268 230 aaPredicted RBP16.85■□□□□ 0.29
SAMM50-204ENST00000493161 IRX3P78415 501 aaPredicted RBP16.85■□□□□ 0.29
SAMM50-204ENST00000493161 G3BP1Q13283 466 aaKnown RBP eCLIP16.85■□□□□ 0.29
SAMM50-204ENST00000493161 Q3C1V9 767 aa16.85■□□□□ 0.29
SAMM50-204ENST00000493161 MAP3K21Q5TCX8 1036 aa16.85■□□□□ 0.29
SAMM50-204ENST00000493161 NAA16Q6N069 864 aaPredicted RBP16.85■□□□□ 0.29
SAMM50-204ENST00000493161 C11orf49Q9H6J7 331 aa16.85■□□□□ 0.29
SAMM50-204ENST00000493161 RBPJLQ9UBG7 517 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms