RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 CACNB2Q08289 660 aaPredicted RBP17.34■□□□□ 0.37
ATG4B-222ENST00000491867 SEMA6BQ9H3T3 888 aa17.34■□□□□ 0.37
ATG4B-222ENST00000491867 UTYO14607 1347 aa17.33■□□□□ 0.36
ATG4B-222ENST00000491867 XRCC5P13010 732 aaKnown RBP17.33■□□□□ 0.36
ATG4B-222ENST00000491867 PABPC4Q13310 644 aaKnown RBP eCLIP17.33■□□□□ 0.36
ATG4B-222ENST00000491867 LHX8Q68G74 356 aa17.33■□□□□ 0.36
ATG4B-222ENST00000491867 LPIN2Q92539 896 aa17.33■□□□□ 0.36
ATG4B-222ENST00000491867 NUDT12Q9BQG2 462 aa17.33■□□□□ 0.36
ATG4B-222ENST00000491867 DDX4Q9NQI0 724 aaKnown RBP17.33■□□□□ 0.36
ATG4B-222ENST00000491867 MYH13Q9UKX3 1938 aa17.33■□□□□ 0.36
ATG4B-222ENST00000491867 PLXNB2O15031 1838 aa17.33■□□□□ 0.36
ATG4B-222ENST00000491867 RFX7Q2KHR2 1363 aa17.32■□□□□ 0.36
ATG4B-222ENST00000491867 ZKSCAN1P17029 563 aaPredicted RBP17.32■□□□□ 0.36
ATG4B-222ENST00000491867 CCND3P30281 292 aaPredicted RBP17.32■□□□□ 0.36
ATG4B-222ENST00000491867 ZNF280CQ8ND82 737 aa17.32■□□□□ 0.36
ATG4B-222ENST00000491867 MYLIPQ8WY64 445 aa17.32■□□□□ 0.36
ATG4B-222ENST00000491867 SYMPKQ92797 1274 aaKnown RBP17.32■□□□□ 0.36
ATG4B-222ENST00000491867 MORF4L1Q9UBU8 362 aa17.32■□□□□ 0.36
ATG4B-222ENST00000491867 FAM196BA6NMK8 535 aa17.31■□□□□ 0.36
ATG4B-222ENST00000491867 PEX10O60683 326 aa17.31■□□□□ 0.36
ATG4B-222ENST00000491867 PICALMQ13492 652 aa17.31■□□□□ 0.36
ATG4B-222ENST00000491867 SOCS4Q8WXH5 440 aa17.31■□□□□ 0.36
ATG4B-222ENST00000491867 GAKO14976 1311 aa17.3■□□□□ 0.36
ATG4B-222ENST00000491867 SALL1Q9NSC2 1324 aa17.3■□□□□ 0.36
ATG4B-222ENST00000491867 CCDC184Q52MB2 194 aa17.3■□□□□ 0.36
ATG4B-222ENST00000491867 TRMT44Q8IYL2 757 aaKnown RBP17.3■□□□□ 0.36
ATG4B-222ENST00000491867 SENP6Q9GZR1 1112 aaPredicted RBP17.3■□□□□ 0.36
ATG4B-222ENST00000491867 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.3■□□□□ 0.36
ATG4B-222ENST00000491867 GNL3LQ9NVN8 582 aaKnown RBP17.3■□□□□ 0.36
ATG4B-222ENST00000491867 MYH2Q9UKX2 1941 aa17.29■□□□□ 0.36
ATG4B-222ENST00000491867 EYA2O00167 538 aa17.29■□□□□ 0.36
ATG4B-222ENST00000491867 TBC1D12O60347 775 aa17.29■□□□□ 0.36
ATG4B-222ENST00000491867 IRX3P78415 501 aaPredicted RBP17.29■□□□□ 0.36
ATG4B-222ENST00000491867 PDE3AQ14432 1141 aa17.29■□□□□ 0.36
ATG4B-222ENST00000491867 SHHQ15465 462 aa17.29■□□□□ 0.36
ATG4B-222ENST00000491867 CCL14Q16627 93 aa17.29■□□□□ 0.36
ATG4B-222ENST00000491867 RAPGEFL1Q9UHV5 662 aa17.29■□□□□ 0.36
ATG4B-222ENST00000491867 LOC285556D6RIA3 1793 aa17.28■□□□□ 0.36
ATG4B-222ENST00000491867 FOSL2P15408 326 aa17.28■□□□□ 0.36
ATG4B-222ENST00000491867 ATN1P54259 1190 aaPredicted RBP17.28■□□□□ 0.36
ATG4B-222ENST00000491867 GPRC5AQ8NFJ5 357 aa17.28■□□□□ 0.36
ATG4B-222ENST00000491867 USP6NLQ92738 828 aa17.28■□□□□ 0.36
ATG4B-222ENST00000491867 P2RX7Q99572 595 aaKnown RBP17.28■□□□□ 0.36
ATG4B-222ENST00000491867 OSBPL5Q9H0X9 879 aaPredicted RBP17.28■□□□□ 0.36
ATG4B-222ENST00000491867 TTYH1Q9H313 450 aaPredicted RBP17.28■□□□□ 0.36
ATG4B-222ENST00000491867 TXNRD2Q9NNW7 524 aa17.28■□□□□ 0.36
ATG4B-222ENST00000491867 PRKAG2Q9UGJ0 569 aa17.28■□□□□ 0.36
ATG4B-222ENST00000491867 MYO9BQ13459 2157 aa17.28■□□□□ 0.36
ATG4B-222ENST00000491867 BTDP43251 543 aa17.27■□□□□ 0.36
ATG4B-222ENST00000491867 PHKA1P46020 1223 aa17.27■□□□□ 0.36
ATG4B-222ENST00000491867 SH3D19Q5HYK7 790 aa17.27■□□□□ 0.36
ATG4B-222ENST00000491867 C9orf50Q5SZB4 431 aa17.27■□□□□ 0.36
ATG4B-222ENST00000491867 DZIP1Q86YF9 867 aaKnown RBP17.27■□□□□ 0.36
ATG4B-222ENST00000491867 TBC1D2Q9BYX2 928 aa17.27■□□□□ 0.36
ATG4B-222ENST00000491867 DENND2AQ9ULE3 1009 aa17.27■□□□□ 0.36
ATG4B-222ENST00000491867 USP17L5A8MUK1 530 aa17.26■□□□□ 0.35
ATG4B-222ENST00000491867 MAPK4P31152 587 aa17.26■□□□□ 0.35
ATG4B-222ENST00000491867 RGS2P41220 211 aa17.26■□□□□ 0.35
ATG4B-222ENST00000491867 RRP1BQ14684 758 aaKnown RBP17.26■□□□□ 0.35
ATG4B-222ENST00000491867 ATP2B3Q16720 1220 aa17.26■□□□□ 0.35
ATG4B-222ENST00000491867 ATG9AQ7Z3C6 839 aa17.26■□□□□ 0.35
ATG4B-222ENST00000491867 PIEZO1Q92508 2521 aa17.25■□□□□ 0.35
ATG4B-222ENST00000491867 TNFRSF10AO00220 468 aa17.25■□□□□ 0.35
ATG4B-222ENST00000491867 SEMA3EO15041 775 aa17.25■□□□□ 0.35
ATG4B-222ENST00000491867 CAP2P40123 477 aa17.25■□□□□ 0.35
ATG4B-222ENST00000491867 RFX5P48382 616 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-222ENST00000491867 RTP1P59025 263 aa17.25■□□□□ 0.35
ATG4B-222ENST00000491867 HERVK_113P62684 666 aa17.25■□□□□ 0.35
ATG4B-222ENST00000491867 SMAD3P84022 425 aaKnown RBP17.25■□□□□ 0.35
ATG4B-222ENST00000491867 NCBP3Q53F19 620 aaKnown RBP17.25■□□□□ 0.35
ATG4B-222ENST00000491867 MORN1Q5T089 497 aa17.25■□□□□ 0.35
ATG4B-222ENST00000491867 CCAR1Q8IX12 1150 aaKnown RBP17.25■□□□□ 0.35
ATG4B-222ENST00000491867 SLF2Q8IX21 1173 aa17.25■□□□□ 0.35
ATG4B-222ENST00000491867 ZGPATQ8N5A5 531 aaKnown RBP17.25■□□□□ 0.35
ATG4B-222ENST00000491867 FAM163AQ96GL9 167 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-222ENST00000491867 APBA2Q99767 749 aa17.25■□□□□ 0.35
ATG4B-222ENST00000491867 PORCNQ9H237 461 aa17.25■□□□□ 0.35
ATG4B-222ENST00000491867 SALL2Q9Y467 1007 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-222ENST00000491867 HOXA7P31268 230 aaPredicted RBP17.24■□□□□ 0.35
ATG4B-222ENST00000491867 RHBDL3P58872 404 aa17.24■□□□□ 0.35
ATG4B-222ENST00000491867 MTMR2Q13614 643 aa17.24■□□□□ 0.35
ATG4B-222ENST00000491867 TJAP1Q5JTD0 557 aa17.24■□□□□ 0.35
ATG4B-222ENST00000491867 GPR142Q7Z601 462 aa17.24■□□□□ 0.35
ATG4B-222ENST00000491867 WDR63Q8IWG1 891 aa17.24■□□□□ 0.35
ATG4B-222ENST00000491867 TMOD4Q9NZQ9 345 aa17.24■□□□□ 0.35
ATG4B-222ENST00000491867 RBPJLQ9UBG7 517 aa17.24■□□□□ 0.35
ATG4B-222ENST00000491867 ABCF2Q9UG63 623 aa17.24■□□□□ 0.35
ATG4B-222ENST00000491867 MAST2Q6P0Q8 1798 aa17.23■□□□□ 0.35
ATG4B-222ENST00000491867 ERVK-9P63128 1117 aa17.23■□□□□ 0.35
ATG4B-222ENST00000491867 ERVK-24P63145 666 aa17.23■□□□□ 0.35
ATG4B-222ENST00000491867 Q3C1V9 767 aa17.23■□□□□ 0.35
ATG4B-222ENST00000491867 PLEKHH3Q7Z736 793 aa17.23■□□□□ 0.35
ATG4B-222ENST00000491867 AS3MTQ9HBK9 375 aa17.23■□□□□ 0.35
ATG4B-222ENST00000491867 CEP126Q9P2H0 1117 aa17.23■□□□□ 0.35
ATG4B-222ENST00000491867 ATP11BQ9Y2G3 1177 aa17.23■□□□□ 0.35
ATG4B-222ENST00000491867 MROH7-TTC4A0A0A0MT08 1334 aa17.22■□□□□ 0.35
ATG4B-222ENST00000491867 NPM3O75607 178 aaKnown RBP17.22■□□□□ 0.35
ATG4B-222ENST00000491867 BACE1P56817 501 aa17.22■□□□□ 0.35
ATG4B-222ENST00000491867 MFSD14CQ5VZR4 134 aa17.22■□□□□ 0.35
ATG4B-222ENST00000491867 USP38Q8NB14 1042 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms