RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 ECM2O94769 699 aaPredicted RBP12.63□□□□□ -0.39
RBM39-236ENST00000490484 CLASRPQ8N2M8 674 aaKnown RBP12.63□□□□□ -0.39
RBM39-236ENST00000490484 MIGA1Q8NAN2 632 aa12.63□□□□□ -0.39
RBM39-236ENST00000490484 TGFBRAP1Q8WUH2 860 aa12.63□□□□□ -0.39
RBM39-236ENST00000490484 PARK7Q99497 189 aaKnown RBP12.63□□□□□ -0.39
RBM39-236ENST00000490484 ARHGAP39Q9C0H5 1083 aa12.63□□□□□ -0.39
RBM39-236ENST00000490484 CPA4Q9UI42 421 aa12.63□□□□□ -0.39
RBM39-236ENST00000490484 PTPN22Q9Y2R2 807 aa12.63□□□□□ -0.39
RBM39-236ENST00000490484 ADGRA2Q96PE1 1338 aa12.62□□□□□ -0.39
RBM39-236ENST00000490484 A0A0G2JLL6 359 aaPredicted RBP12.62□□□□□ -0.39
RBM39-236ENST00000490484 CXCL11O14625 94 aa12.62□□□□□ -0.39
RBM39-236ENST00000490484 IFIT2P09913 472 aaKnown RBP12.62□□□□□ -0.39
RBM39-236ENST00000490484 PPP4CP60510 307 aa12.62□□□□□ -0.39
RBM39-236ENST00000490484 DYNLL1P63167 89 aaKnown RBP12.62□□□□□ -0.39
RBM39-236ENST00000490484 LACTBP83111 547 aaPredicted RBP12.62□□□□□ -0.39
RBM39-236ENST00000490484 MAP3K12Q12852 859 aa12.62□□□□□ -0.39
RBM39-236ENST00000490484 PDE3AQ14432 1141 aa12.62□□□□□ -0.39
RBM39-236ENST00000490484 SLC4A8Q2Y0W8 1093 aa12.62□□□□□ -0.39
RBM39-236ENST00000490484 PRRT2Q7Z6L0 340 aaPredicted RBP12.62□□□□□ -0.39
RBM39-236ENST00000490484 SAP30BPQ9UHR5 308 aaKnown RBP12.62□□□□□ -0.39
RBM39-236ENST00000490484 AFG3L2Q9Y4W6 797 aa12.62□□□□□ -0.39
RBM39-236ENST00000490484 IGSF3O75054 1194 aa12.61□□□□□ -0.39
RBM39-236ENST00000490484 CYP2C8P10632 490 aa12.61□□□□□ -0.39
RBM39-236ENST00000490484 RRP1BQ14684 758 aaKnown RBP12.61□□□□□ -0.39
RBM39-236ENST00000490484 KIF22Q14807 665 aa12.61□□□□□ -0.39
RBM39-236ENST00000490484 GPAT2Q6NUI2 795 aa12.61□□□□□ -0.39
RBM39-236ENST00000490484 GADL1Q6ZQY3 521 aa12.61□□□□□ -0.39
RBM39-236ENST00000490484 DNAJC2Q99543 621 aaKnown RBP12.61□□□□□ -0.39
RBM39-236ENST00000490484 DHX36Q9H2U1 1008 aaKnown RBP12.61□□□□□ -0.39
RBM39-236ENST00000490484 PI4KBQ9UBF8 816 aa12.61□□□□□ -0.39
RBM39-236ENST00000490484 HERC5Q9UII4 1024 aaKnown RBP12.61□□□□□ -0.39
RBM39-236ENST00000490484 LOC285556D6RIA3 1793 aa12.61□□□□□ -0.39
RBM39-236ENST00000490484 MKI67P46013 3256 aaKnown RBP12.61□□□□□ -0.39
RBM39-236ENST00000490484 DDX60LQ5H9U9 1706 aaKnown RBP12.6□□□□□ -0.39
RBM39-236ENST00000490484 NAV1Q8NEY1 1877 aa12.6□□□□□ -0.39
RBM39-236ENST00000490484 RAB11FIP3O75154 756 aa12.6□□□□□ -0.39
RBM39-236ENST00000490484 USP5P45974 858 aa12.6□□□□□ -0.39
RBM39-236ENST00000490484 ARHGEF6Q15052 776 aa12.6□□□□□ -0.39
RBM39-236ENST00000490484 C17orf99Q6UX52 265 aa12.6□□□□□ -0.39
RBM39-236ENST00000490484 FASTKD5Q7L8L6 764 aaKnown RBP12.6□□□□□ -0.39
RBM39-236ENST00000490484 CRACR2BQ8N4Y2 399 aaPredicted RBP12.6□□□□□ -0.39
RBM39-236ENST00000490484 TRIM34Q9BYJ4 488 aa12.6□□□□□ -0.39
RBM39-236ENST00000490484 DNAJC18Q9H819 358 aa12.6□□□□□ -0.39
RBM39-236ENST00000490484 PALD1Q9ULE6 856 aa12.6□□□□□ -0.39
RBM39-236ENST00000490484 PTCH2Q9Y6C5 1203 aa12.6□□□□□ -0.39
RBM39-236ENST00000490484 GOLIM4O00461 696 aa12.59□□□□□ -0.39
RBM39-236ENST00000490484 HLA-DOAP06340 250 aa12.59□□□□□ -0.39
RBM39-236ENST00000490484 CAP2P40123 477 aa12.59□□□□□ -0.39
RBM39-236ENST00000490484 TTF1Q15361 905 aaPredicted RBP12.59□□□□□ -0.39
RBM39-236ENST00000490484 MYH1P12882 1939 aa12.58□□□□□ -0.39
RBM39-236ENST00000490484 PDE6AP16499 860 aa12.58□□□□□ -0.4
RBM39-236ENST00000490484 CTGFP29279 349 aa12.58□□□□□ -0.4
RBM39-236ENST00000490484 SPP2Q13103 211 aa12.58□□□□□ -0.4
RBM39-236ENST00000490484 SHROOM1Q2M3G4 852 aaPredicted RBP12.58□□□□□ -0.4
RBM39-236ENST00000490484 SLC9C1Q4G0N8 1177 aa12.58□□□□□ -0.4
RBM39-236ENST00000490484 TREML2Q5T2D2 321 aa12.58□□□□□ -0.4
RBM39-236ENST00000490484 SLC9C2Q5TAH2 1124 aa12.58□□□□□ -0.4
RBM39-236ENST00000490484 CERS3Q8IU89 383 aa12.58□□□□□ -0.4
RBM39-236ENST00000490484 ZNF280CQ8ND82 737 aa12.58□□□□□ -0.4
RBM39-236ENST00000490484 SMCR8Q8TEV9 937 aaPredicted RBP12.58□□□□□ -0.4
RBM39-236ENST00000490484 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.58□□□□□ -0.4
RBM39-236ENST00000490484 ARMC5Q96C12 935 aa12.58□□□□□ -0.4
RBM39-236ENST00000490484 EDC3Q96F86 508 aaKnown RBP12.58□□□□□ -0.4
RBM39-236ENST00000490484 AGTPBP1Q9UPW5 1226 aa12.58□□□□□ -0.4
RBM39-236ENST00000490484 RBBP6Q7Z6E9 1792 aaKnown RBP12.58□□□□□ -0.4
RBM39-236ENST00000490484 MAGEB6P1A0A0J9YX57 407 aa12.57□□□□□ -0.4
RBM39-236ENST00000490484 POTEFA5A3E0 1075 aa12.57□□□□□ -0.4
RBM39-236ENST00000490484 USP17L5A8MUK1 530 aa12.57□□□□□ -0.4
RBM39-236ENST00000490484 GDF11O95390 407 aa12.57□□□□□ -0.4
RBM39-236ENST00000490484 MYCP01106 439 aaPredicted RBP12.57□□□□□ -0.4
RBM39-236ENST00000490484 BCRP11274 1271 aa12.57□□□□□ -0.4
RBM39-236ENST00000490484 PSMC4P43686 418 aa12.57□□□□□ -0.4
RBM39-236ENST00000490484 HMGCS2P54868 508 aa12.57□□□□□ -0.4
RBM39-236ENST00000490484 TMED8Q6PL24 325 aaPredicted RBP12.57□□□□□ -0.4
RBM39-236ENST00000490484 TRIM47Q96LD4 638 aa12.57□□□□□ -0.4
RBM39-236ENST00000490484 RIOK1Q9BRS2 568 aaKnown RBP12.57□□□□□ -0.4
RBM39-236ENST00000490484 LRRCC1Q9C099 1032 aa12.57□□□□□ -0.4
RBM39-236ENST00000490484 BOLA2Q9H3K6 86 aa12.57□□□□□ -0.4
RBM39-236ENST00000490484 SLC45A1Q9Y2W3 748 aa12.57□□□□□ -0.4
RBM39-236ENST00000490484 ZNF532Q9HCE3 1301 aa12.57□□□□□ -0.4
RBM39-236ENST00000490484 PDE4DIPQ5VU43 2346 aa12.56□□□□□ -0.4
RBM39-236ENST00000490484 SMARCA5O60264 1052 aaPredicted RBP12.56□□□□□ -0.4
RBM39-236ENST00000490484 FMNL1O95466 1100 aaPredicted RBP12.56□□□□□ -0.4
RBM39-236ENST00000490484 GNRH1P01148 92 aa12.56□□□□□ -0.4
RBM39-236ENST00000490484 ASNSP08243 561 aa12.56□□□□□ -0.4
RBM39-236ENST00000490484 JAG1P78504 1218 aa12.56□□□□□ -0.4
RBM39-236ENST00000490484 MTMR2Q13614 643 aa12.56□□□□□ -0.4
RBM39-236ENST00000490484 METTL16Q86W50 562 aaKnown RBP12.56□□□□□ -0.4
RBM39-236ENST00000490484 FOXP4Q8IVH2 680 aaPredicted RBP12.56□□□□□ -0.4
RBM39-236ENST00000490484 PROCA1Q8NCQ7 364 aaPredicted RBP12.56□□□□□ -0.4
RBM39-236ENST00000490484 SH3TC2Q8TF17 1288 aa12.56□□□□□ -0.4
RBM39-236ENST00000490484 ZNF333Q96JL9 665 aa12.56□□□□□ -0.4
RBM39-236ENST00000490484 YTHDC1Q96MU7 727 aaKnown RBP12.56□□□□□ -0.4
RBM39-236ENST00000490484 TBC1D2Q9BYX2 928 aa12.56□□□□□ -0.4
RBM39-236ENST00000490484 AS3MTQ9HBK9 375 aa12.56□□□□□ -0.4
RBM39-236ENST00000490484 PAG1Q9NWQ8 432 aa12.56□□□□□ -0.4
RBM39-236ENST00000490484 ZBTB21Q9ULJ3 1066 aa12.56□□□□□ -0.4
RBM39-236ENST00000490484 MYPNQ86TC9 1320 aa12.56□□□□□ -0.4
RBM39-236ENST00000490484 MGAMO43451 1857 aa12.55□□□□□ -0.4
RBM39-236ENST00000490484 ATP5JP18859 108 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms