RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 WHAMMQ8TF30 809 aa6.93□□□□□ -1.3
SRRM1-215ENST00000488317 TM9SF2Q99805 663 aa6.93□□□□□ -1.3
SRRM1-215ENST00000488317 RUSC1Q9BVN2 902 aa6.93□□□□□ -1.3
SRRM1-215ENST00000488317 CCDC113Q9H0I3 377 aa6.93□□□□□ -1.3
SRRM1-215ENST00000488317 GMIPQ9P107 970 aa6.93□□□□□ -1.3
SRRM1-215ENST00000488317 MAPK8IP1Q9UQF2 711 aa6.93□□□□□ -1.3
SRRM1-215ENST00000488317 HIF3AQ9Y2N7 669 aa6.93□□□□□ -1.3
SRRM1-215ENST00000488317 A0A1W2PQH9 124 aa6.92□□□□□ -1.3
SRRM1-215ENST00000488317 SLC22A31A6NKX4 558 aa6.92□□□□□ -1.3
SRRM1-215ENST00000488317 TM4SF5O14894 197 aa6.92□□□□□ -1.3
SRRM1-215ENST00000488317 HSP90B1P14625 803 aaKnown RBP6.92□□□□□ -1.3
SRRM1-215ENST00000488317 NCLP19338 710 aaKnown RBP6.92□□□□□ -1.3
SRRM1-215ENST00000488317 DGKGP49619 791 aa6.92□□□□□ -1.3
SRRM1-215ENST00000488317 RASA3Q14644 834 aa6.92□□□□□ -1.3
SRRM1-215ENST00000488317 PPM1JQ5JR12 505 aa6.92□□□□□ -1.3
SRRM1-215ENST00000488317 NUTM2GQ5VZR2 741 aa6.92□□□□□ -1.3
SRRM1-215ENST00000488317 OVOS1Q6IE37 1185 aa6.92□□□□□ -1.3
SRRM1-215ENST00000488317 C19orf47Q8N9M1 422 aaKnown RBP6.92□□□□□ -1.3
SRRM1-215ENST00000488317 A0A0A0MRY4 1105 aa6.91□□□□□ -1.3
SRRM1-215ENST00000488317 FAM86C2PA6NEL3 165 aa6.91□□□□□ -1.3
SRRM1-215ENST00000488317 MEIS3P2A8K0S8 358 aa6.91□□□□□ -1.3
SRRM1-215ENST00000488317 PDPK1O15530 556 aa6.91□□□□□ -1.3
SRRM1-215ENST00000488317 ARSHQ5FYA8 562 aa6.91□□□□□ -1.3
SRRM1-215ENST00000488317 ACAD11Q709F0 780 aa6.91□□□□□ -1.3
SRRM1-215ENST00000488317 ILDR2Q71H61 639 aa6.91□□□□□ -1.3
SRRM1-215ENST00000488317 NLRC3Q7RTR2 1065 aa6.91□□□□□ -1.3
SRRM1-215ENST00000488317 FMR1NBQ8N0W7 255 aaPredicted RBP6.91□□□□□ -1.3
SRRM1-215ENST00000488317 NLGN1Q8N2Q7 840 aa6.91□□□□□ -1.3
SRRM1-215ENST00000488317 ATG4CQ96DT6 458 aa6.91□□□□□ -1.3
SRRM1-215ENST00000488317 DNAJC7Q99615 494 aa6.91□□□□□ -1.3
SRRM1-215ENST00000488317 WNT10AQ9GZT5 417 aa6.91□□□□□ -1.3
SRRM1-215ENST00000488317 AP4E1Q9UPM8 1137 aa6.91□□□□□ -1.3
SRRM1-215ENST00000488317 SPDYE3A6NKU9 549 aa6.9□□□□□ -1.3
SRRM1-215ENST00000488317 CHURC1-FNTBB4DL54 471 aa6.9□□□□□ -1.3
SRRM1-215ENST00000488317 WFS1O76024 890 aa6.9□□□□□ -1.3
SRRM1-215ENST00000488317 GJB6O95452 261 aa6.9□□□□□ -1.3
SRRM1-215ENST00000488317 NME1P15531 152 aaKnown RBP6.9□□□□□ -1.3
SRRM1-215ENST00000488317 ERVK-24P63145 666 aa6.9□□□□□ -1.3
SRRM1-215ENST00000488317 TRIM28Q13263 835 aaKnown RBP6.9□□□□□ -1.3
SRRM1-215ENST00000488317 TMEM201Q5SNT2 666 aa6.9□□□□□ -1.3
SRRM1-215ENST00000488317 C6orf15Q6UXA7 325 aaPredicted RBP6.9□□□□□ -1.3
SRRM1-215ENST00000488317 CDC37L1Q7L3B6 337 aa6.9□□□□□ -1.3
SRRM1-215ENST00000488317 SVOPQ8N4V2 548 aa6.9□□□□□ -1.3
SRRM1-215ENST00000488317 C12orf50Q8NA57 414 aaPredicted RBP6.9□□□□□ -1.3
SRRM1-215ENST00000488317 FAM13CQ8NE31 585 aa6.9□□□□□ -1.3
SRRM1-215ENST00000488317 ZNF507Q8TCN5 953 aa6.9□□□□□ -1.3
SRRM1-215ENST00000488317 MICAL1Q8TDZ2 1067 aa6.9□□□□□ -1.3
SRRM1-215ENST00000488317 PLVAPQ9BX97 442 aa6.9□□□□□ -1.3
SRRM1-215ENST00000488317 CYP4F12Q9HCS2 524 aa6.9□□□□□ -1.3
SRRM1-215ENST00000488317 ADAM30Q9UKF2 790 aa6.9□□□□□ -1.3
SRRM1-215ENST00000488317 PPP1R9AQ9ULJ8 1098 aa6.9□□□□□ -1.3
SRRM1-215ENST00000488317 MSRB2Q9Y3D2 182 aa6.9□□□□□ -1.3
SRRM1-215ENST00000488317 SLC12A7Q9Y666 1083 aa6.9□□□□□ -1.3
SRRM1-215ENST00000488317 DLL1O00548 723 aa6.89□□□□□ -1.31
SRRM1-215ENST00000488317 FANCGO15287 622 aa6.89□□□□□ -1.31
SRRM1-215ENST00000488317 TMPRSS2O15393 492 aa6.89□□□□□ -1.31
SRRM1-215ENST00000488317 WISP1O95388 367 aa6.89□□□□□ -1.31
SRRM1-215ENST00000488317 RAG1P15918 1043 aa6.89□□□□□ -1.31
SRRM1-215ENST00000488317 YARSP54577 528 aaKnown RBP6.89□□□□□ -1.31
SRRM1-215ENST00000488317 ZBTB37Q5TC79 503 aa6.89□□□□□ -1.31
SRRM1-215ENST00000488317 UNC5AQ6ZN44 842 aa6.89□□□□□ -1.31
SRRM1-215ENST00000488317 ZNF662Q6ZS27 426 aa6.89□□□□□ -1.31
SRRM1-215ENST00000488317 DYMQ7RTS9 669 aa6.89□□□□□ -1.31
SRRM1-215ENST00000488317 FAM178BQ8IXR5 827 aa6.89□□□□□ -1.31
SRRM1-215ENST00000488317 ACSF2Q96CM8 615 aaPredicted RBP6.89□□□□□ -1.31
SRRM1-215ENST00000488317 RNF208Q9H0X6 261 aa6.89□□□□□ -1.31
SRRM1-215ENST00000488317 ATXN3LQ9H3M9 355 aa6.89□□□□□ -1.31
SRRM1-215ENST00000488317 CNNM2Q9H8M5 875 aa6.89□□□□□ -1.31
SRRM1-215ENST00000488317 SSU72Q9NP77 194 aaKnown RBP6.89□□□□□ -1.31
SRRM1-215ENST00000488317 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.89□□□□□ -1.31
SRRM1-215ENST00000488317 PCDHGC5Q9Y5F6 944 aa6.89□□□□□ -1.31
SRRM1-215ENST00000488317 SYNGAP1Q96PV0 1343 aa6.88□□□□□ -1.31
SRRM1-215ENST00000488317 UPK3BL1B0FP48 263 aa6.88□□□□□ -1.31
SRRM1-215ENST00000488317 B2RBV5 119 aa6.88□□□□□ -1.31
SRRM1-215ENST00000488317 UPK3BL2E5RIL1 263 aa6.88□□□□□ -1.31
SRRM1-215ENST00000488317 DNAJA2O60884 412 aa6.88□□□□□ -1.31
SRRM1-215ENST00000488317 RNGTTO60942 597 aaKnown RBP6.88□□□□□ -1.31
SRRM1-215ENST00000488317 RASGRF1Q13972 1273 aa6.88□□□□□ -1.31
SRRM1-215ENST00000488317 TCEAL1Q15170 157 aa6.88□□□□□ -1.31
SRRM1-215ENST00000488317 ZYXQ15942 572 aaKnown RBP6.88□□□□□ -1.31
SRRM1-215ENST00000488317 MTERF2Q49AM1 385 aa6.88□□□□□ -1.31
SRRM1-215ENST00000488317 CDCP2Q5VXM1 449 aa6.88□□□□□ -1.31
SRRM1-215ENST00000488317 EGFLAMQ63HQ2 1017 aa6.88□□□□□ -1.31
SRRM1-215ENST00000488317 ZNF385CQ66K41 422 aaPredicted RBP6.88□□□□□ -1.31
SRRM1-215ENST00000488317 INTS3Q68E01 1043 aaKnown RBP6.88□□□□□ -1.31
SRRM1-215ENST00000488317 VHLLQ6RSH7 139 aa6.88□□□□□ -1.31
SRRM1-215ENST00000488317 HID1Q8IV36 788 aa6.88□□□□□ -1.31
SRRM1-215ENST00000488317 PHACTR4Q8IZ21 702 aa6.88□□□□□ -1.31
SRRM1-215ENST00000488317 TAB3Q8N5C8 712 aaPredicted RBP6.88□□□□□ -1.31
SRRM1-215ENST00000488317 TRIM11Q96F44 468 aa6.88□□□□□ -1.31
SRRM1-215ENST00000488317 RNPC3Q96LT9 517 aaKnown RBP6.88□□□□□ -1.31
SRRM1-215ENST00000488317 FANCD2OSQ96PS1 177 aa6.88□□□□□ -1.31
SRRM1-215ENST00000488317 SLC9A7Q96T83 725 aa6.88□□□□□ -1.31
SRRM1-215ENST00000488317 TMPRSS13Q9BYE2 586 aa6.88□□□□□ -1.31
SRRM1-215ENST00000488317 PIDD1Q9HB75 910 aa6.88□□□□□ -1.31
SRRM1-215ENST00000488317 CRIM1Q9NZV1 1036 aa6.88□□□□□ -1.31
SRRM1-215ENST00000488317 SBNO2Q9Y2G9 1366 aa6.87□□□□□ -1.31
SRRM1-215ENST00000488317 MEGF11A6BM72 1044 aa6.87□□□□□ -1.31
SRRM1-215ENST00000488317 FAM229AH3BQW9 127 aa6.87□□□□□ -1.31
SRRM1-215ENST00000488317 PIK3R2O00459 728 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms