RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 SIRT2Q8IXJ6 389 aa23.63■■□□□ 1.37
CD55-209ENST00000488171 NDUFB9Q9Y6M9 179 aa23.63■■□□□ 1.37
CD55-209ENST00000488171 RBBP6Q7Z6E9 1792 aaKnown RBP23.63■■□□□ 1.37
CD55-209ENST00000488171 ATAD5Q96QE3 1844 aa23.62■■□□□ 1.37
CD55-209ENST00000488171 POTEFA5A3E0 1075 aa23.62■■□□□ 1.37
CD55-209ENST00000488171 HSP90AB4PQ58FF6 505 aa23.62■■□□□ 1.37
CD55-209ENST00000488171 RPAP2Q8IXW5 612 aaPredicted RBP23.62■■□□□ 1.37
CD55-209ENST00000488171 RHPN1Q8TCX5 695 aa23.62■■□□□ 1.37
CD55-209ENST00000488171 TGFBRAP1Q8WUH2 860 aa23.62■■□□□ 1.37
CD55-209ENST00000488171 PARK7Q99497 189 aaKnown RBP23.62■■□□□ 1.37
CD55-209ENST00000488171 IL1RAPL2Q9NP60 686 aa23.62■■□□□ 1.37
CD55-209ENST00000488171 FLT1P17948 1338 aa23.61■■□□□ 1.37
CD55-209ENST00000488171 TRIM75PA6NK02 468 aa23.61■■□□□ 1.37
CD55-209ENST00000488171 CYP2C8P10632 490 aa23.61■■□□□ 1.37
CD55-209ENST00000488171 GADL1Q6ZQY3 521 aa23.61■■□□□ 1.37
CD55-209ENST00000488171 MAPKAPK5Q8IW41 473 aa23.61■■□□□ 1.37
CD55-209ENST00000488171 DHX36Q9H2U1 1008 aaKnown RBP23.61■■□□□ 1.37
CD55-209ENST00000488171 ANTXR1Q9H6X2 564 aa23.61■■□□□ 1.37
CD55-209ENST00000488171 HERC5Q9UII4 1024 aaKnown RBP23.61■■□□□ 1.37
CD55-209ENST00000488171 IDH1O75874 414 aaKnown RBP23.6■■□□□ 1.37
CD55-209ENST00000488171 GNRH1P01148 92 aa23.6■■□□□ 1.37
CD55-209ENST00000488171 CYP7A1P22680 504 aa23.6■■□□□ 1.37
CD55-209ENST00000488171 CAP2P40123 477 aa23.6■■□□□ 1.37
CD55-209ENST00000488171 DYNLL1P63167 89 aaKnown RBP23.6■■□□□ 1.37
CD55-209ENST00000488171 ZNF333Q96JL9 665 aa23.6■■□□□ 1.37
CD55-209ENST00000488171 PI4KBQ9UBF8 816 aa23.6■■□□□ 1.37
CD55-209ENST00000488171 ECM2O94769 699 aaPredicted RBP23.59■■□□□ 1.37
CD55-209ENST00000488171 BCRP11274 1271 aa23.59■■□□□ 1.37
CD55-209ENST00000488171 SLC9C1Q4G0N8 1177 aa23.59■■□□□ 1.37
CD55-209ENST00000488171 TRIM47Q96LD4 638 aa23.59■■□□□ 1.37
CD55-209ENST00000488171 SLC45A1Q9Y2W3 748 aa23.59■■□□□ 1.37
CD55-209ENST00000488171 PSMC4P43686 418 aa23.58■■□□□ 1.37
CD55-209ENST00000488171 HMMRO75330 724 aa23.57■■□□□ 1.36
CD55-209ENST00000488171 METTL16Q86W50 562 aaKnown RBP23.57■■□□□ 1.36
CD55-209ENST00000488171 MAGEB6Q8N7X4 407 aa23.57■■□□□ 1.36
CD55-209ENST00000488171 KIF1BPQ96EK5 621 aa23.57■■□□□ 1.36
CD55-209ENST00000488171 DNAJC18Q9H819 358 aa23.57■■□□□ 1.36
CD55-209ENST00000488171 PALD1Q9ULE6 856 aa23.57■■□□□ 1.36
CD55-209ENST00000488171 APBB1O00213 710 aa23.56■■□□□ 1.36
CD55-209ENST00000488171 PRMT2P55345 433 aa23.56■■□□□ 1.36
CD55-209ENST00000488171 C20orf194Q5TEA3 1177 aa23.56■■□□□ 1.36
CD55-209ENST00000488171 NBPF11Q86T75 865 aa23.56■■□□□ 1.36
CD55-209ENST00000488171 MIGA1Q8NAN2 632 aa23.56■■□□□ 1.36
CD55-209ENST00000488171 AGTPBP1Q9UPW5 1226 aa23.56■■□□□ 1.36
CD55-209ENST00000488171 LOC285556D6RIA3 1793 aa23.56■■□□□ 1.36
CD55-209ENST00000488171 OSBPP22059 807 aa23.55■■□□□ 1.36
CD55-209ENST00000488171 SPP2Q13103 211 aa23.55■■□□□ 1.36
CD55-209ENST00000488171 TREML2Q5T2D2 321 aa23.55■■□□□ 1.36
CD55-209ENST00000488171 CLASRPQ8N2M8 674 aaKnown RBP23.55■■□□□ 1.36
CD55-209ENST00000488171 ZNF280CQ8ND82 737 aa23.55■■□□□ 1.36
CD55-209ENST00000488171 TBC1D2Q9BYX2 928 aa23.55■■□□□ 1.36
CD55-209ENST00000488171 SRRDQ9UH36 339 aa23.55■■□□□ 1.36
CD55-209ENST00000488171 BRCA2P51587 3418 aa23.55■■□□□ 1.36
CD55-209ENST00000488171 USP17L5A8MUK1 530 aa23.54■■□□□ 1.36
CD55-209ENST00000488171 JAG1P78504 1218 aa23.54■■□□□ 1.36
CD55-209ENST00000488171 MAP3K12Q12852 859 aa23.54■■□□□ 1.36
CD55-209ENST00000488171 FOXP4Q8IVH2 680 aaPredicted RBP23.54■■□□□ 1.36
CD55-209ENST00000488171 PROCA1Q8NCQ7 364 aaPredicted RBP23.54■■□□□ 1.36
CD55-209ENST00000488171 SH3TC2Q8TF17 1288 aa23.54■■□□□ 1.36
CD55-209ENST00000488171 CHMP4BQ9H444 224 aaKnown RBP23.54■■□□□ 1.36
CD55-209ENST00000488171 SAP30BPQ9UHR5 308 aaKnown RBP23.54■■□□□ 1.36
CD55-209ENST00000488171 MGAMO43451 1857 aa23.54■■□□□ 1.36
CD55-209ENST00000488171 FMNL1O95466 1100 aaPredicted RBP23.53■■□□□ 1.36
CD55-209ENST00000488171 RAB11FIP3O75154 756 aa23.52■■□□□ 1.36
CD55-209ENST00000488171 EN2P19622 333 aaPredicted RBP23.52■■□□□ 1.36
CD55-209ENST00000488171 PDE3AQ14432 1141 aa23.52■■□□□ 1.36
CD55-209ENST00000488171 TMED8Q6PL24 325 aaPredicted RBP23.52■■□□□ 1.36
CD55-209ENST00000488171 CERS3Q8IU89 383 aa23.52■■□□□ 1.36
CD55-209ENST00000488171 CRACR2BQ8N4Y2 399 aaPredicted RBP23.52■■□□□ 1.36
CD55-209ENST00000488171 MYH1P12882 1939 aa23.52■■□□□ 1.36
CD55-209ENST00000488171 HOXD10P28358 340 aa23.52■■□□□ 1.36
CD55-209ENST00000488171 HMGCS2P54868 508 aa23.52■■□□□ 1.36
CD55-209ENST00000488171 SHROOM1Q2M3G4 852 aaPredicted RBP23.52■■□□□ 1.36
CD55-209ENST00000488171 SLC4A8Q2Y0W8 1093 aa23.52■■□□□ 1.36
CD55-209ENST00000488171 SMCR8Q8TEV9 937 aaPredicted RBP23.52■■□□□ 1.36
CD55-209ENST00000488171 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.52■■□□□ 1.36
CD55-209ENST00000488171 TMEM106CQ9BVX2 250 aa23.52■■□□□ 1.36
CD55-209ENST00000488171 MYPNQ86TC9 1320 aa23.51■■□□□ 1.35
CD55-209ENST00000488171 PDE4DIPQ5VU43 2346 aa23.51■■□□□ 1.35
CD55-209ENST00000488171 HLA-DOAP06340 250 aa23.51■■□□□ 1.35
CD55-209ENST00000488171 ASNSP08243 561 aa23.51■■□□□ 1.35
CD55-209ENST00000488171 IFIT2P09913 472 aaKnown RBP23.51■■□□□ 1.35
CD55-209ENST00000488171 FCGRTP55899 365 aa23.51■■□□□ 1.35
CD55-209ENST00000488171 TTF1Q15361 905 aaPredicted RBP23.51■■□□□ 1.35
CD55-209ENST00000488171 SH3D19Q5HYK7 790 aa23.51■■□□□ 1.35
CD55-209ENST00000488171 RIOK1Q9BRS2 568 aaKnown RBP23.51■■□□□ 1.35
CD55-209ENST00000488171 WDR18Q9BV38 432 aa23.51■■□□□ 1.35
CD55-209ENST00000488171 AS3MTQ9HBK9 375 aa23.51■■□□□ 1.35
CD55-209ENST00000488171 MKI67P46013 3256 aaKnown RBP23.5■■□□□ 1.35
CD55-209ENST00000488171 MYCP01106 439 aaPredicted RBP23.5■■□□□ 1.35
CD55-209ENST00000488171 USP5P45974 858 aa23.5■■□□□ 1.35
CD55-209ENST00000488171 TRIM34Q9BYJ4 488 aa23.5■■□□□ 1.35
CD55-209ENST00000488171 GDF11O95390 407 aa23.49■■□□□ 1.35
CD55-209ENST00000488171 PRKCZQ05513 592 aa23.49■■□□□ 1.35
CD55-209ENST00000488171 DDX60LQ5H9U9 1706 aaKnown RBP23.49■■□□□ 1.35
CD55-209ENST00000488171 RAET1EQ8TD07 263 aa23.49■■□□□ 1.35
CD55-209ENST00000488171 BCL11AQ9H165 835 aa23.49■■□□□ 1.35
CD55-209ENST00000488171 PNMA3Q9UL41 463 aa23.49■■□□□ 1.35
CD55-209ENST00000488171 KIAA0100Q14667 2235 aaKnown RBP23.48■■□□□ 1.35
CD55-209ENST00000488171 GOLIM4O00461 696 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms