RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 LRFN4Q6PJG9 635 aa8.21□□□□□ -1.1
SMC4-219ENST00000487747 ARHGAP27Q6ZUM4 889 aa8.21□□□□□ -1.1
SMC4-219ENST00000487747 ANKRD24Q8TF21 1146 aa8.21□□□□□ -1.1
SMC4-219ENST00000487747 ASIC4Q96FT7 647 aa8.21□□□□□ -1.1
SMC4-219ENST00000487747 PRDM10Q9NQV6 1147 aa8.21□□□□□ -1.1
SMC4-219ENST00000487747 PICK1Q9NRD5 415 aa8.21□□□□□ -1.1
SMC4-219ENST00000487747 SPG7Q9UQ90 795 aa8.21□□□□□ -1.1
SMC4-219ENST00000487747 SAMM50Q9Y512 469 aa8.21□□□□□ -1.1
SMC4-219ENST00000487747 CARMIL2Q6F5E8 1435 aa8.2□□□□□ -1.1
SMC4-219ENST00000487747 YBX3P16989 372 aaKnown RBP eCLIP8.2□□□□□ -1.1
SMC4-219ENST00000487747 ATP2B2Q01814 1243 aa8.2□□□□□ -1.1
SMC4-219ENST00000487747 TNKS2Q9H2K2 1166 aa8.2□□□□□ -1.1
SMC4-219ENST00000487747 FAM8A1Q9UBU6 413 aa8.2□□□□□ -1.1
SMC4-219ENST00000487747 CNTNAP4Q9C0A0 1308 aa8.2□□□□□ -1.1
SMC4-219ENST00000487747 ARID1BQ8NFD5 2236 aaPredicted RBP8.19□□□□□ -1.1
SMC4-219ENST00000487747 FANCGO15287 622 aa8.19□□□□□ -1.1
SMC4-219ENST00000487747 LRRC14Q15048 493 aa8.19□□□□□ -1.1
SMC4-219ENST00000487747 GAL3ST3Q96A11 431 aa8.19□□□□□ -1.1
SMC4-219ENST00000487747 HRASLS5Q96KN8 279 aa8.19□□□□□ -1.1
SMC4-219ENST00000487747 FBRSQ9HAH7 460 aa8.19□□□□□ -1.1
SMC4-219ENST00000487747 PRDM7Q9NQW5 492 aa8.19□□□□□ -1.1
SMC4-219ENST00000487747 CYP8B1Q9UNU6 501 aa8.19□□□□□ -1.1
SMC4-219ENST00000487747 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.19□□□□□ -1.1
SMC4-219ENST00000487747 TMEM265A0A087WTH1 108 aa8.18□□□□□ -1.1
SMC4-219ENST00000487747 EOMESO95936 686 aa8.18□□□□□ -1.1
SMC4-219ENST00000487747 NKPD1Q17RQ9 610 aa8.18□□□□□ -1.1
SMC4-219ENST00000487747 ARMCX6Q7L4S7 300 aa8.18□□□□□ -1.1
SMC4-219ENST00000487747 SPACA3Q8IXA5 215 aa8.18□□□□□ -1.1
SMC4-219ENST00000487747 ELMO3Q96BJ8 720 aa8.18□□□□□ -1.1
SMC4-219ENST00000487747 PLPPR2Q96GM1 343 aa8.18□□□□□ -1.1
SMC4-219ENST00000487747 RC3H2Q9HBD1 1191 aaKnown RBP8.18□□□□□ -1.1
SMC4-219ENST00000487747 TTF2Q9UNY4 1162 aaKnown RBP8.18□□□□□ -1.1
SMC4-219ENST00000487747 PRAMEF27A3QJZ7 478 aa8.17□□□□□ -1.1
SMC4-219ENST00000487747 NKG7Q16617 165 aa8.17□□□□□ -1.1
SMC4-219ENST00000487747 CYFIP1Q7L576 1253 aa8.17□□□□□ -1.1
SMC4-219ENST00000487747 LRRN4CLQ8ND94 238 aa8.17□□□□□ -1.1
SMC4-219ENST00000487747 PI4K2BQ8TCG2 481 aa8.17□□□□□ -1.1
SMC4-219ENST00000487747 CDC37L1Q7L3B6 337 aa8.16□□□□□ -1.1
SMC4-219ENST00000487747 TRAIPQ9BWF2 469 aa8.16□□□□□ -1.1
SMC4-219ENST00000487747 PCDHB5Q9Y5E4 795 aa8.16□□□□□ -1.1
SMC4-219ENST00000487747 PRR33A8MZF0 331 aa8.15□□□□□ -1.1
SMC4-219ENST00000487747 IGF2BP3O00425 579 aaKnown RBP eCLIP8.15□□□□□ -1.1
SMC4-219ENST00000487747 SLITRK5O94991 958 aa8.15□□□□□ -1.1
SMC4-219ENST00000487747 SLBPQ14493 270 aaKnown RBP eCLIP8.15□□□□□ -1.1
SMC4-219ENST00000487747 SCARA3Q6AZY7 606 aa8.15□□□□□ -1.1
SMC4-219ENST00000487747 TTBK2Q6IQ55 1244 aa8.15□□□□□ -1.1
SMC4-219ENST00000487747 SV2BQ7L1I2 683 aa8.15□□□□□ -1.1
SMC4-219ENST00000487747 GTF2IRD1Q9UHL9 959 aa8.15□□□□□ -1.1
SMC4-219ENST00000487747 GNA15P30679 374 aa8.14□□□□□ -1.11
SMC4-219ENST00000487747 ATG4DQ86TL0 474 aaPredicted RBP8.14□□□□□ -1.11
SMC4-219ENST00000487747 POU5F2Q8N7G0 328 aa8.14□□□□□ -1.11
SMC4-219ENST00000487747 RIN3Q8TB24 985 aa8.14□□□□□ -1.11
SMC4-219ENST00000487747 ZNF507Q8TCN5 953 aa8.14□□□□□ -1.11
SMC4-219ENST00000487747 KRTAP4-9Q9BYQ8 210 aa8.14□□□□□ -1.11
SMC4-219ENST00000487747 SNX11Q9Y5W9 270 aa8.14□□□□□ -1.11
SMC4-219ENST00000487747 C8AP07357 584 aa8.13□□□□□ -1.11
SMC4-219ENST00000487747 SEPT6Q14141 434 aa8.13□□□□□ -1.11
SMC4-219ENST00000487747 WIPI1Q5MNZ9 446 aaPredicted RBP8.13□□□□□ -1.11
SMC4-219ENST00000487747 ANGEL2Q5VTE6 544 aaKnown RBP8.13□□□□□ -1.11
SMC4-219ENST00000487747 DUSP9Q99956 384 aaKnown RBP8.13□□□□□ -1.11
SMC4-219ENST00000487747 LRIG2O94898 1065 aa8.12□□□□□ -1.11
SMC4-219ENST00000487747 EIF4BP23588 611 aaKnown RBP8.12□□□□□ -1.11
SMC4-219ENST00000487747 CCDC85BQ15834 202 aaPredicted RBP8.12□□□□□ -1.11
SMC4-219ENST00000487747 ZNF648Q5T619 568 aaPredicted RBP8.12□□□□□ -1.11
SMC4-219ENST00000487747 HDXQ7Z353 690 aa8.12□□□□□ -1.11
SMC4-219ENST00000487747 KCT2Q8NC54 265 aa8.12□□□□□ -1.11
SMC4-219ENST00000487747 FOXQ1Q9C009 403 aa8.12□□□□□ -1.11
SMC4-219ENST00000487747 WNT10AQ9GZT5 417 aa8.12□□□□□ -1.11
SMC4-219ENST00000487747 PRDM5Q9NQX1 630 aaPredicted RBP8.12□□□□□ -1.11
SMC4-219ENST00000487747 AK5Q9Y6K8 562 aa8.12□□□□□ -1.11
SMC4-219ENST00000487747 ANKRD33BA6NCL7 494 aa8.11□□□□□ -1.11
SMC4-219ENST00000487747 BIN1O00499 593 aa8.11□□□□□ -1.11
SMC4-219ENST00000487747 PRPF40AO75400 957 aaKnown RBP8.11□□□□□ -1.11
SMC4-219ENST00000487747 IKZF1Q13422 519 aa8.11□□□□□ -1.11
SMC4-219ENST00000487747 MAP3K11Q16584 847 aa8.11□□□□□ -1.11
SMC4-219ENST00000487747 MEI1Q5TIA1 1274 aa8.11□□□□□ -1.11
SMC4-219ENST00000487747 SLC23A3Q6PIS1 610 aa8.11□□□□□ -1.11
SMC4-219ENST00000487747 FAM168AQ92567 244 aa8.11□□□□□ -1.11
SMC4-219ENST00000487747 MIPEPQ99797 713 aa8.11□□□□□ -1.11
SMC4-219ENST00000487747 PITPNM2Q9BZ72 1349 aa8.1□□□□□ -1.11
SMC4-219ENST00000487747 GNAT3A8MTJ3 354 aa8.1□□□□□ -1.11
SMC4-219ENST00000487747 GFRA2O00451 464 aa8.1□□□□□ -1.11
SMC4-219ENST00000487747 ETF1P62495 437 aaKnown RBP8.1□□□□□ -1.11
SMC4-219ENST00000487747 ZP2Q05996 745 aa8.1□□□□□ -1.11
SMC4-219ENST00000487747 ASB11Q8WXH4 323 aa8.1□□□□□ -1.11
SMC4-219ENST00000487747 FRMD6Q96NE9 622 aa8.1□□□□□ -1.11
SMC4-219ENST00000487747 GRK4P32298 578 aa8.09□□□□□ -1.11
SMC4-219ENST00000487747 PRAMEF13Q5VWM6 474 aa8.09□□□□□ -1.11
SMC4-219ENST00000487747 XAGE3Q8WTP9 111 aa8.09□□□□□ -1.11
SMC4-219ENST00000487747 HSPA12BQ96MM6 686 aa8.09□□□□□ -1.11
SMC4-219ENST00000487747 SEMA3GQ9NS98 782 aa8.09□□□□□ -1.11
SMC4-219ENST00000487747 TPX2Q9ULW0 747 aaKnown RBP8.09□□□□□ -1.11
SMC4-219ENST00000487747 MAPK8IP1Q9UQF2 711 aa8.09□□□□□ -1.11
SMC4-219ENST00000487747 SNCAIPQ9Y6H5 919 aa8.09□□□□□ -1.11
SMC4-219ENST00000487747 FGD1P98174 961 aa8.08□□□□□ -1.12
SMC4-219ENST00000487747 FZD5Q13467 585 aa8.08□□□□□ -1.12
SMC4-219ENST00000487747 CDKAL1Q5VV42 579 aa8.08□□□□□ -1.12
SMC4-219ENST00000487747 AGMOQ6ZNB7 445 aa8.08□□□□□ -1.12
SMC4-219ENST00000487747 ATP13A1Q9HD20 1204 aa8.08□□□□□ -1.12
SMC4-219ENST00000487747 TFE3P19532 575 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms