RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 PPP4CP60510 307 aa30.04■■■□□ 2.4
LIME1-206ENST00000487026 MAPKAPK5Q8IW41 473 aa30.04■■■□□ 2.4
LIME1-206ENST00000487026 TGFBRAP1Q8WUH2 860 aa30.04■■■□□ 2.4
LIME1-206ENST00000487026 TMEM106CQ9BVX2 250 aa30.04■■■□□ 2.4
LIME1-206ENST00000487026 BCRP11274 1271 aa30.03■■■□□ 2.4
LIME1-206ENST00000487026 MYO5AQ9Y4I1 1855 aaKnown RBP30.03■■■□□ 2.4
LIME1-206ENST00000487026 COL2A1P02458 1487 aaPredicted RBP30.02■■■□□ 2.4
LIME1-206ENST00000487026 PHIPQ8WWQ0 1821 aa30.02■■■□□ 2.4
LIME1-206ENST00000487026 OSBPP22059 807 aa30.02■■■□□ 2.4
LIME1-206ENST00000487026 DYNLL1P63167 89 aaKnown RBP30.02■■■□□ 2.4
LIME1-206ENST00000487026 SRRDQ9UH36 339 aa30.02■■■□□ 2.4
LIME1-206ENST00000487026 BRCA2P51587 3418 aa30.02■■■□□ 2.4
LIME1-206ENST00000487026 PLCG2P16885 1265 aa30.01■■■□□ 2.39
LIME1-206ENST00000487026 PRPF38BQ5VTL8 546 aaKnown RBP30.01■■■□□ 2.39
LIME1-206ENST00000487026 AACSQ86V21 672 aa30.01■■■□□ 2.39
LIME1-206ENST00000487026 IDH1O75874 414 aaKnown RBP30■■■□□ 2.39
LIME1-206ENST00000487026 CYP7A1P22680 504 aa30■■■□□ 2.39
LIME1-206ENST00000487026 CAP2P40123 477 aa30■■■□□ 2.39
LIME1-206ENST00000487026 PRMT2P55345 433 aa30■■■□□ 2.39
LIME1-206ENST00000487026 SPP2Q13103 211 aa30■■■□□ 2.39
LIME1-206ENST00000487026 SLC4A8Q2Y0W8 1093 aa30■■■□□ 2.39
LIME1-206ENST00000487026 IL1RAPL2Q9NP60 686 aa30■■■□□ 2.39
LIME1-206ENST00000487026 PI4KBQ9UBF8 816 aa30■■■□□ 2.39
LIME1-206ENST00000487026 COG6Q9Y2V7 657 aa30■■■□□ 2.39
LIME1-206ENST00000487026 MS4A1P11836 297 aa29.99■■■□□ 2.39
LIME1-206ENST00000487026 TREML2Q5T2D2 321 aa29.99■■■□□ 2.39
LIME1-206ENST00000487026 ERC1Q8IUD2 1116 aa29.99■■■□□ 2.39
LIME1-206ENST00000487026 DHX36Q9H2U1 1008 aaKnown RBP29.99■■■□□ 2.39
LIME1-206ENST00000487026 ANTXR1Q9H6X2 564 aa29.99■■■□□ 2.39
LIME1-206ENST00000487026 HERC5Q9UII4 1024 aaKnown RBP29.99■■■□□ 2.39
LIME1-206ENST00000487026 PALD1Q9ULE6 856 aa29.99■■■□□ 2.39
LIME1-206ENST00000487026 MAST2Q6P0Q8 1798 aa29.99■■■□□ 2.39
LIME1-206ENST00000487026 FLT1P17948 1338 aa29.98■■■□□ 2.39
LIME1-206ENST00000487026 MKI67P46013 3256 aaKnown RBP29.98■■■□□ 2.39
LIME1-206ENST00000487026 HOXD10P28358 340 aa29.98■■■□□ 2.39
LIME1-206ENST00000487026 SAP30BPQ9UHR5 308 aaKnown RBP29.98■■■□□ 2.39
LIME1-206ENST00000487026 SLC45A1Q9Y2W3 748 aa29.98■■■□□ 2.39
LIME1-206ENST00000487026 PTPRFP10586 1907 aa29.98■■■□□ 2.39
LIME1-206ENST00000487026 APBB1O00213 710 aa29.97■■■□□ 2.39
LIME1-206ENST00000487026 MIGA1Q8NAN2 632 aa29.97■■■□□ 2.39
LIME1-206ENST00000487026 ZNF280CQ8ND82 737 aa29.97■■■□□ 2.39
LIME1-206ENST00000487026 RAET1EQ8TD07 263 aa29.97■■■□□ 2.39
LIME1-206ENST00000487026 AGTPBP1Q9UPW5 1226 aa29.97■■■□□ 2.39
LIME1-206ENST00000487026 RBBP6Q7Z6E9 1792 aaKnown RBP29.97■■■□□ 2.39
LIME1-206ENST00000487026 MYPNQ86TC9 1320 aa29.96■■■□□ 2.39
LIME1-206ENST00000487026 JAG1P78504 1218 aa29.96■■■□□ 2.39
LIME1-206ENST00000487026 MAGEB6Q8N7X4 407 aa29.96■■■□□ 2.39
LIME1-206ENST00000487026 RHPN1Q8TCX5 695 aa29.96■■■□□ 2.39
LIME1-206ENST00000487026 SMCR8Q8TEV9 937 aaPredicted RBP29.96■■■□□ 2.39
LIME1-206ENST00000487026 BCL11AQ9H165 835 aa29.96■■■□□ 2.39
LIME1-206ENST00000487026 USP17L5A8MUK1 530 aa29.95■■■□□ 2.39
LIME1-206ENST00000487026 HMGCS2P54868 508 aa29.95■■■□□ 2.39
LIME1-206ENST00000487026 FCGRTP55899 365 aa29.95■■■□□ 2.39
LIME1-206ENST00000487026 DNAJC18Q9H819 358 aa29.95■■■□□ 2.39
LIME1-206ENST00000487026 PRKCZQ05513 592 aa29.94■■■□□ 2.38
LIME1-206ENST00000487026 MTFR1Q15390 333 aa29.94■■■□□ 2.38
LIME1-206ENST00000487026 FOXP4Q8IVH2 680 aaPredicted RBP29.94■■■□□ 2.38
LIME1-206ENST00000487026 SIRT2Q8IXJ6 389 aa29.94■■■□□ 2.38
LIME1-206ENST00000487026 GABRQQ9UN88 632 aa29.94■■■□□ 2.38
LIME1-206ENST00000487026 SIPA1L1O43166 1804 aa29.94■■■□□ 2.38
LIME1-206ENST00000487026 CDK5RAP2Q96SN8 1893 aa29.93■■■□□ 2.38
LIME1-206ENST00000487026 IGSF3O75054 1194 aa29.93■■■□□ 2.38
LIME1-206ENST00000487026 GRK4P32298 578 aa29.93■■■□□ 2.38
LIME1-206ENST00000487026 SHROOM1Q2M3G4 852 aaPredicted RBP29.93■■■□□ 2.38
LIME1-206ENST00000487026 HSP90AB4PQ58FF6 505 aa29.93■■■□□ 2.38
LIME1-206ENST00000487026 CRACR2BQ8N4Y2 399 aaPredicted RBP29.93■■■□□ 2.38
LIME1-206ENST00000487026 PROCA1Q8NCQ7 364 aaPredicted RBP29.93■■■□□ 2.38
LIME1-206ENST00000487026 TRIM34Q9BYJ4 488 aa29.93■■■□□ 2.38
LIME1-206ENST00000487026 ZBTB40Q9NUA8 1239 aa29.93■■■□□ 2.38
LIME1-206ENST00000487026 DDX19BQ9UMR2 479 aa29.93■■■□□ 2.38
LIME1-206ENST00000487026 ATAD5Q96QE3 1844 aa29.92■■■□□ 2.38
LIME1-206ENST00000487026 RPAP2Q8IXW5 612 aaPredicted RBP29.92■■■□□ 2.38
LIME1-206ENST00000487026 ANKRD13CQ8N6S4 541 aa29.92■■■□□ 2.38
LIME1-206ENST00000487026 RCAN3Q9UKA8 241 aa29.92■■■□□ 2.38
LIME1-206ENST00000487026 GDF11O95390 407 aa29.91■■■□□ 2.38
LIME1-206ENST00000487026 MAP3K12Q12852 859 aa29.91■■■□□ 2.38
LIME1-206ENST00000487026 METTL16Q86W50 562 aaKnown RBP29.91■■■□□ 2.38
LIME1-206ENST00000487026 TBC1D2Q9BYX2 928 aa29.91■■■□□ 2.38
LIME1-206ENST00000487026 AS3MTQ9HBK9 375 aa29.91■■■□□ 2.38
LIME1-206ENST00000487026 SLC34A2O95436 690 aa29.9■■■□□ 2.38
LIME1-206ENST00000487026 BIN2Q9UBW5 565 aaPredicted RBP29.9■■■□□ 2.38
LIME1-206ENST00000487026 USP5P45974 858 aa29.89■■■□□ 2.38
LIME1-206ENST00000487026 PNMA3Q9UL41 463 aa29.89■■■□□ 2.38
LIME1-206ENST00000487026 FOCADQ5VW36 1801 aa29.89■■■□□ 2.38
LIME1-206ENST00000487026 MGAMO43451 1857 aa29.89■■■□□ 2.37
LIME1-206ENST00000487026 HMMRO75330 724 aa29.88■■■□□ 2.37
LIME1-206ENST00000487026 HLA-DOAP06340 250 aa29.88■■■□□ 2.37
LIME1-206ENST00000487026 SH3D19Q5HYK7 790 aa29.88■■■□□ 2.37
LIME1-206ENST00000487026 CLASRPQ8N2M8 674 aaKnown RBP29.88■■■□□ 2.37
LIME1-206ENST00000487026 KIF1BPQ96EK5 621 aa29.88■■■□□ 2.37
LIME1-206ENST00000487026 WDR18Q9BV38 432 aa29.88■■■□□ 2.37
LIME1-206ENST00000487026 TNPO2O14787 897 aaKnown RBP29.87■■■□□ 2.37
LIME1-206ENST00000487026 ASNSP08243 561 aa29.87■■■□□ 2.37
LIME1-206ENST00000487026 FLT3LGP49771 235 aa29.87■■■□□ 2.37
LIME1-206ENST00000487026 MTMR2Q13614 643 aa29.87■■■□□ 2.37
LIME1-206ENST00000487026 IFIT2P09913 472 aaKnown RBP29.86■■■□□ 2.37
LIME1-206ENST00000487026 BACE1P56817 501 aa29.86■■■□□ 2.37
LIME1-206ENST00000487026 C20orf194Q5TEA3 1177 aa29.86■■■□□ 2.37
LIME1-206ENST00000487026 ASCC2Q9H1I8 757 aaPredicted RBP29.86■■■□□ 2.37
LIME1-206ENST00000487026 CCL5P13501 91 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms