RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 INSRP06213 1382 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 LDHBP07195 334 aaKnown RBP6.63□□□□□ -1.35
SF1-217ENST00000486960 ACEP12821 1306 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 HCLS1P14317 486 aaPredicted RBP6.63□□□□□ -1.35
SF1-217ENST00000486960 IL2RBP14784 551 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 RASA1P20936 1047 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 EPHX2P34913 555 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 MASP1P48740 699 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 SEC13P55735 322 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 DAB2P98082 770 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 DDR1Q08345 913 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 CBLBQ13191 982 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 PTK7Q13308 1070 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 SIM2Q14190 667 aaPredicted RBP6.63□□□□□ -1.35
SF1-217ENST00000486960 HSP90AB3PQ58FF7 597 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 ACBD5Q5T8D3 534 aaPredicted RBP6.63□□□□□ -1.35
SF1-217ENST00000486960 PLEKHM2Q8IWE5 1019 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 SYNE4Q8N205 404 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 CHCHD4Q8N4Q1 142 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 PDCD7Q8N8D1 485 aaKnown RBP6.63□□□□□ -1.35
SF1-217ENST00000486960 DDX54Q8TDD1 881 aaKnown RBP6.63□□□□□ -1.35
SF1-217ENST00000486960 PALLDQ8WX93 1383 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 DUSP9Q99956 384 aaKnown RBP6.63□□□□□ -1.35
SF1-217ENST00000486960 ZNF541Q9H0D2 1346 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 ENAMQ9NRM1 1142 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 SAGE1Q9NXZ1 904 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.63□□□□□ -1.35
SF1-217ENST00000486960 SIRPGQ9P1W8 387 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 ODF2LQ9ULJ1 636 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 SYNRGQ9UMZ2 1314 aa6.63□□□□□ -1.35
SF1-217ENST00000486960 SLX4Q8IY92 1834 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 BCORQ6W2J9 1755 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 COL5A3P25940 1745 aaPredicted RBP6.62□□□□□ -1.35
SF1-217ENST00000486960 MON2Q7Z3U7 1717 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 CHD6Q8TD26 2715 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 IQCA1LA6NCM1 817 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 FAM155AB1AL88 458 aaPredicted RBP6.62□□□□□ -1.35
SF1-217ENST00000486960 POTEB2H3BUK9 544 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 RBP3P10745 1247 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 GJA5P36382 358 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 SSR1P43307 286 aaKnown RBP6.62□□□□□ -1.35
SF1-217ENST00000486960 IRX3P78415 501 aaPredicted RBP6.62□□□□□ -1.35
SF1-217ENST00000486960 ARHGAP4P98171 946 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 FKBP4Q02790 459 aaKnown RBP eCLIP6.62□□□□□ -1.35
SF1-217ENST00000486960 DSG2Q14126 1118 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 MORC3Q14149 939 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 LONRF1Q17RB8 773 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 BRDTQ58F21 947 aaPredicted RBP6.62□□□□□ -1.35
SF1-217ENST00000486960 C1QTNF12Q5T7M4 302 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 TTLL5Q6EMB2 1281 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 TAS1R3Q7RTX0 852 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 ARHGEF25Q86VW2 580 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 NBPF5PQ86XG9 351 aaPredicted RBP6.62□□□□□ -1.35
SF1-217ENST00000486960 ANKMY2Q8IV38 441 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 PGBD3Q8N328 593 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 E2F7Q96AV8 911 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 ALDH8A1Q9H2A2 487 aaPredicted RBP6.62□□□□□ -1.35
SF1-217ENST00000486960 HMX1Q9NP08 348 aaPredicted RBP6.62□□□□□ -1.35
SF1-217ENST00000486960 FAM13BQ9NYF5 915 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 HDAC9Q9UKV0 1011 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 ATRXP46100 2492 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 REV3LO60673 3130 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 ALPK3Q96L96 1907 aa6.62□□□□□ -1.35
SF1-217ENST00000486960 RNF123Q5XPI4 1314 aa6.61□□□□□ -1.35
SF1-217ENST00000486960 PABPN1LA6NDY0 278 aaKnown RBP6.61□□□□□ -1.35
SF1-217ENST00000486960 GOLGA6L6A8MZA4 724 aa6.61□□□□□ -1.35
SF1-217ENST00000486960 WASLO00401 505 aaPredicted RBP6.61□□□□□ -1.35
SF1-217ENST00000486960 PPEF1O14829 653 aaPredicted RBP6.61□□□□□ -1.35
SF1-217ENST00000486960 ALDH1L1O75891 902 aa6.61□□□□□ -1.35
SF1-217ENST00000486960 MTA2O94776 668 aa6.61□□□□□ -1.35
SF1-217ENST00000486960 FMNL1O95466 1100 aaPredicted RBP6.61□□□□□ -1.35
SF1-217ENST00000486960 GYS1P13807 737 aa6.61□□□□□ -1.35
SF1-217ENST00000486960 RRM1P23921 792 aa6.61□□□□□ -1.35
SF1-217ENST00000486960 FLT3P36888 993 aa6.61□□□□□ -1.35
SF1-217ENST00000486960 HSP90AA2PQ14568 343 aaPredicted RBP6.61□□□□□ -1.35
SF1-217ENST00000486960 ECM1Q16610 540 aa6.61□□□□□ -1.35
SF1-217ENST00000486960 KANK3Q6NY19 840 aa6.61□□□□□ -1.35
SF1-217ENST00000486960 FBXO46Q6PJ61 603 aaPredicted RBP6.61□□□□□ -1.35
SF1-217ENST00000486960 KSR2Q6VAB6 950 aa6.61□□□□□ -1.35
SF1-217ENST00000486960 METTL3Q86U44 580 aaKnown RBP6.61□□□□□ -1.35
SF1-217ENST00000486960 NLRP13Q86W25 1043 aa6.61□□□□□ -1.35
SF1-217ENST00000486960 HOMER1Q86YM7 354 aa6.61□□□□□ -1.35
SF1-217ENST00000486960 NLRP7Q8WX94 980 aa6.61□□□□□ -1.35
SF1-217ENST00000486960 GOLGA1Q92805 767 aa6.61□□□□□ -1.35
SF1-217ENST00000486960 CCDC47Q96A33 483 aaKnown RBP6.61□□□□□ -1.35
SF1-217ENST00000486960 CYLDQ9NQC7 956 aa6.61□□□□□ -1.35
SF1-217ENST00000486960 CLIC5Q9NZA1 410 aa6.61□□□□□ -1.35
SF1-217ENST00000486960 EVLQ9UI08 416 aaPredicted RBP6.61□□□□□ -1.35
SF1-217ENST00000486960 ACAD8Q9UKU7 415 aa6.61□□□□□ -1.35
SF1-217ENST00000486960 DIS3Q9Y2L1 958 aaKnown RBP6.61□□□□□ -1.35
SF1-217ENST00000486960 ANKRD26Q9UPS8 1709 aa6.61□□□□□ -1.35
SF1-217ENST00000486960 POLR2AP24928 1970 aaKnown RBP6.6□□□□□ -1.35
SF1-217ENST00000486960 ARFGEF2Q9Y6D5 1785 aa6.6□□□□□ -1.35
SF1-217ENST00000486960 USP17L5A8MUK1 530 aa6.6□□□□□ -1.35
SF1-217ENST00000486960 MAP3K7O43318 606 aa6.6□□□□□ -1.35
SF1-217ENST00000486960 SKIP12755 728 aa6.6□□□□□ -1.35
SF1-217ENST00000486960 ATF4P18848 351 aaPredicted RBP6.6□□□□□ -1.35
SF1-217ENST00000486960 PPM1FP49593 454 aaPredicted RBP6.6□□□□□ -1.35
SF1-217ENST00000486960 PKN2Q16513 984 aaKnown RBP6.6□□□□□ -1.35
SF1-217ENST00000486960 ZNF394Q53GI3 561 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 551.3 ms