RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 TFE3P19532 575 aaPredicted RBP8.14□□□□□ -1.11
SMARCC1-207ENST00000485833 ZNF326Q5BKZ1 582 aaKnown RBP8.14□□□□□ -1.11
SMARCC1-207ENST00000485833 CDC37L1Q7L3B6 337 aa8.14□□□□□ -1.11
SMARCC1-207ENST00000485833 TOP6BLQ8N6T0 577 aa8.14□□□□□ -1.11
SMARCC1-207ENST00000485833 ZC3H7BQ9UGR2 993 aaKnown RBP8.14□□□□□ -1.11
SMARCC1-207ENST00000485833 LEFTY1O75610 366 aa8.13□□□□□ -1.11
SMARCC1-207ENST00000485833 WNT11O96014 354 aa8.13□□□□□ -1.11
SMARCC1-207ENST00000485833 CDK8P49336 464 aa8.13□□□□□ -1.11
SMARCC1-207ENST00000485833 GP2P55259 537 aaKnown RBP8.13□□□□□ -1.11
SMARCC1-207ENST00000485833 VSIG10LQ86VR7 867 aa8.13□□□□□ -1.11
SMARCC1-207ENST00000485833 PHC3Q8NDX5 983 aa8.13□□□□□ -1.11
SMARCC1-207ENST00000485833 ZNF507Q8TCN5 953 aa8.13□□□□□ -1.11
SMARCC1-207ENST00000485833 BSDC1Q9NW68 430 aaPredicted RBP8.13□□□□□ -1.11
SMARCC1-207ENST00000485833 TLR6Q9Y2C9 796 aa8.13□□□□□ -1.11
SMARCC1-207ENST00000485833 WNT10AQ9GZT5 417 aa8.12□□□□□ -1.11
SMARCC1-207ENST00000485833 CCDC39Q9UFE4 941 aa8.12□□□□□ -1.11
SMARCC1-207ENST00000485833 ANGEL1Q9UNK9 670 aaKnown RBP8.12□□□□□ -1.11
SMARCC1-207ENST00000485833 TSNAXIP1Q2TAA8 658 aa8.11□□□□□ -1.11
SMARCC1-207ENST00000485833 ARMCX6Q7L4S7 300 aa8.11□□□□□ -1.11
SMARCC1-207ENST00000485833 BCL11AQ9H165 835 aa8.11□□□□□ -1.11
SMARCC1-207ENST00000485833 PRDM10Q9NQV6 1147 aa8.11□□□□□ -1.11
SMARCC1-207ENST00000485833 LRIG2O94898 1065 aa8.1□□□□□ -1.11
SMARCC1-207ENST00000485833 MFAP1P55081 439 aaKnown RBP8.1□□□□□ -1.11
SMARCC1-207ENST00000485833 ETF1P62495 437 aaKnown RBP8.1□□□□□ -1.11
SMARCC1-207ENST00000485833 FAM181AQ8N9Y4 354 aa8.1□□□□□ -1.11
SMARCC1-207ENST00000485833 FBRSQ9HAH7 460 aa8.1□□□□□ -1.11
SMARCC1-207ENST00000485833 TACC3Q9Y6A5 838 aa8.1□□□□□ -1.11
SMARCC1-207ENST00000485833 OAS3Q9Y6K5 1087 aaKnown RBP8.1□□□□□ -1.11
SMARCC1-207ENST00000485833 F6X3S4 739 aa8.09□□□□□ -1.11
SMARCC1-207ENST00000485833 GFRA2O00451 464 aa8.09□□□□□ -1.11
SMARCC1-207ENST00000485833 CAP2P40123 477 aa8.09□□□□□ -1.11
SMARCC1-207ENST00000485833 MRPL58Q14197 206 aaKnown RBP8.09□□□□□ -1.11
SMARCC1-207ENST00000485833 DIEXFQ68CQ4 756 aaKnown RBP8.09□□□□□ -1.11
SMARCC1-207ENST00000485833 CCDC84Q86UT8 332 aaPredicted RBP8.09□□□□□ -1.11
SMARCC1-207ENST00000485833 RSRP1Q9BUV0 290 aa8.09□□□□□ -1.11
SMARCC1-207ENST00000485833 MKNK2Q9HBH9 465 aa8.09□□□□□ -1.11
SMARCC1-207ENST00000485833 GRK4P32298 578 aa8.08□□□□□ -1.12
SMARCC1-207ENST00000485833 RPL6Q02878 288 aaKnown RBP8.08□□□□□ -1.12
SMARCC1-207ENST00000485833 LMNB2Q03252 620 aa8.08□□□□□ -1.12
SMARCC1-207ENST00000485833 PWP1Q13610 501 aa8.08□□□□□ -1.12
SMARCC1-207ENST00000485833 SLBPQ14493 270 aaKnown RBP eCLIP8.08□□□□□ -1.12
SMARCC1-207ENST00000485833 NFXL1Q6ZNB6 911 aa8.08□□□□□ -1.12
SMARCC1-207ENST00000485833 ARHGAP27Q6ZUM4 889 aa8.08□□□□□ -1.12
SMARCC1-207ENST00000485833 RELL1Q8IUW5 271 aa8.08□□□□□ -1.12
SMARCC1-207ENST00000485833 HID1Q8IV36 788 aa8.08□□□□□ -1.12
SMARCC1-207ENST00000485833 PLD6Q8N2A8 252 aaKnown RBP8.08□□□□□ -1.12
SMARCC1-207ENST00000485833 NETO1Q8TDF5 533 aa8.08□□□□□ -1.12
SMARCC1-207ENST00000485833 JARID2Q92833 1246 aaPredicted RBP8.08□□□□□ -1.12
SMARCC1-207ENST00000485833 RHOVQ96L33 236 aa8.08□□□□□ -1.12
SMARCC1-207ENST00000485833 TMEM74Q96NL1 305 aa8.08□□□□□ -1.12
SMARCC1-207ENST00000485833 U3KQE9 123 aa8.08□□□□□ -1.12
SMARCC1-207ENST00000485833 RB1CC1Q8TDY2 1594 aa8.07□□□□□ -1.12
SMARCC1-207ENST00000485833 CEACAM5P06731 702 aa8.07□□□□□ -1.12
SMARCC1-207ENST00000485833 ZNF16P17020 682 aaPredicted RBP8.07□□□□□ -1.12
SMARCC1-207ENST00000485833 GBP2P32456 591 aaPredicted RBP8.07□□□□□ -1.12
SMARCC1-207ENST00000485833 OXCT1P55809 520 aa8.07□□□□□ -1.12
SMARCC1-207ENST00000485833 CAMK2GQ13555 558 aaPredicted RBP8.07□□□□□ -1.12
SMARCC1-207ENST00000485833 NKG7Q16617 165 aa8.07□□□□□ -1.12
SMARCC1-207ENST00000485833 FAM214BQ7L5A3 538 aa8.07□□□□□ -1.12
SMARCC1-207ENST00000485833 FBXL18Q96ME1 805 aa8.07□□□□□ -1.12
SMARCC1-207ENST00000485833 FOXQ1Q9C009 403 aa8.07□□□□□ -1.12
SMARCC1-207ENST00000485833 GTF2IRD1Q9UHL9 959 aa8.07□□□□□ -1.12
SMARCC1-207ENST00000485833 PF4P02776 101 aa8.06□□□□□ -1.12
SMARCC1-207ENST00000485833 BNC2Q6ZN30 1099 aaPredicted RBP8.06□□□□□ -1.12
SMARCC1-207ENST00000485833 STK11IPQ8N1F8 1099 aa8.06□□□□□ -1.12
SMARCC1-207ENST00000485833 MFSD2AQ8NA29 543 aa8.06□□□□□ -1.12
SMARCC1-207ENST00000485833 FLCNQ8NFG4 579 aa8.06□□□□□ -1.12
SMARCC1-207ENST00000485833 MISP3Q96FF7 219 aa8.06□□□□□ -1.12
SMARCC1-207ENST00000485833 HEXIM2Q96MH2 286 aaKnown RBP8.06□□□□□ -1.12
SMARCC1-207ENST00000485833 IGF2BP3O00425 579 aaKnown RBP eCLIP8.05□□□□□ -1.12
SMARCC1-207ENST00000485833 CILPO75339 1184 aa8.05□□□□□ -1.12
SMARCC1-207ENST00000485833 BPNT1O95861 308 aa8.05□□□□□ -1.12
SMARCC1-207ENST00000485833 EOMESO95936 686 aa8.05□□□□□ -1.12
SMARCC1-207ENST00000485833 PGRP06401 933 aa8.05□□□□□ -1.12
SMARCC1-207ENST00000485833 PDE4BQ07343 736 aa8.05□□□□□ -1.12
SMARCC1-207ENST00000485833 IFI16Q16666 785 aaKnown RBP8.05□□□□□ -1.12
SMARCC1-207ENST00000485833 ERMP1Q7Z2K6 904 aa8.05□□□□□ -1.12
SMARCC1-207ENST00000485833 BCL7CQ8WUZ0 217 aaPredicted RBP8.05□□□□□ -1.12
SMARCC1-207ENST00000485833 GATAD2BQ8WXI9 593 aa8.05□□□□□ -1.12
SMARCC1-207ENST00000485833 SLC5A6Q9Y289 635 aa8.05□□□□□ -1.12
SMARCC1-207ENST00000485833 UNC13AQ9UPW8 1703 aa8.04□□□□□ -1.12
SMARCC1-207ENST00000485833 FAM221AA4D161 298 aa8.04□□□□□ -1.12
SMARCC1-207ENST00000485833 SLITRK5O94991 958 aa8.04□□□□□ -1.12
SMARCC1-207ENST00000485833 F13A1P00488 732 aa8.04□□□□□ -1.12
SMARCC1-207ENST00000485833 CST3P01034 146 aaPredicted RBP8.04□□□□□ -1.12
SMARCC1-207ENST00000485833 ITIH2P19823 946 aa8.04□□□□□ -1.12
SMARCC1-207ENST00000485833 PRAMEF13Q5VWM6 474 aa8.04□□□□□ -1.12
SMARCC1-207ENST00000485833 MIPEPQ99797 713 aa8.04□□□□□ -1.12
SMARCC1-207ENST00000485833 PRDM5Q9NQX1 630 aaPredicted RBP8.04□□□□□ -1.12
SMARCC1-207ENST00000485833 KBTBD4Q9NVX7 518 aa8.04□□□□□ -1.12
SMARCC1-207ENST00000485833 MAPK8IP1Q9UQF2 711 aa8.04□□□□□ -1.12
SMARCC1-207ENST00000485833 IRAK1P51617 712 aa8.03□□□□□ -1.12
SMARCC1-207ENST00000485833 SNAP47Q5SQN1 464 aa8.03□□□□□ -1.12
SMARCC1-207ENST00000485833 TP53INP2Q8IXH6 220 aa8.03□□□□□ -1.12
SMARCC1-207ENST00000485833 MRPL41Q8IXM3 137 aaKnown RBP8.03□□□□□ -1.12
SMARCC1-207ENST00000485833 ABI1Q8IZP0 508 aa8.03□□□□□ -1.12
SMARCC1-207ENST00000485833 AGBL5Q8NDL9 886 aa8.03□□□□□ -1.12
SMARCC1-207ENST00000485833 TNKS2Q9H2K2 1166 aa8.03□□□□□ -1.12
SMARCC1-207ENST00000485833 PAK6Q9NQU5 681 aaPredicted RBP8.03□□□□□ -1.12
SMARCC1-207ENST00000485833 TJP2Q9UDY2 1190 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms