RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 EAF2Q96CJ1 260 aaPredicted RBP22.14■■□□□ 1.13
ATG4B-221ENST00000483778 TMEM106CQ9BVX2 250 aa22.14■■□□□ 1.13
ATG4B-221ENST00000483778 DBNLQ9UJU6 430 aaKnown RBP22.14■■□□□ 1.13
ATG4B-221ENST00000483778 FMNL1O95466 1100 aaPredicted RBP22.13■■□□□ 1.13
ATG4B-221ENST00000483778 JAG1P78504 1218 aa22.13■■□□□ 1.13
ATG4B-221ENST00000483778 MTFR1Q15390 333 aa22.13■■□□□ 1.13
ATG4B-221ENST00000483778 FASTKD5Q7L8L6 764 aaKnown RBP22.13■■□□□ 1.13
ATG4B-221ENST00000483778 AATFQ9NY61 560 aaKnown RBP eCLIP22.13■■□□□ 1.13
ATG4B-221ENST00000483778 GABRQQ9UN88 632 aa22.13■■□□□ 1.13
ATG4B-221ENST00000483778 MAST2Q6P0Q8 1798 aa22.12■■□□□ 1.13
ATG4B-221ENST00000483778 SLC4A8Q2Y0W8 1093 aa22.12■■□□□ 1.13
ATG4B-221ENST00000483778 CCDC158Q5M9N0 1113 aa22.12■■□□□ 1.13
ATG4B-221ENST00000483778 TREML2Q5T2D2 321 aa22.12■■□□□ 1.13
ATG4B-221ENST00000483778 NAA16Q6N069 864 aaPredicted RBP22.12■■□□□ 1.13
ATG4B-221ENST00000483778 NDUFB9Q9Y6M9 179 aa22.12■■□□□ 1.13
ATG4B-221ENST00000483778 GNRH1P01148 92 aa22.11■■□□□ 1.13
ATG4B-221ENST00000483778 DYNLL1P63167 89 aaKnown RBP22.11■■□□□ 1.13
ATG4B-221ENST00000483778 SHROOM1Q2M3G4 852 aaPredicted RBP22.11■■□□□ 1.13
ATG4B-221ENST00000483778 CEP85Q6P2H3 762 aa22.11■■□□□ 1.13
ATG4B-221ENST00000483778 TGFBRAP1Q8WUH2 860 aa22.11■■□□□ 1.13
ATG4B-221ENST00000483778 PARK7Q99497 189 aaKnown RBP22.11■■□□□ 1.13
ATG4B-221ENST00000483778 MYH1P12882 1939 aa22.1■■□□□ 1.13
ATG4B-221ENST00000483778 MAP4K4O95819 1239 aaPredicted RBP22.1■■□□□ 1.13
ATG4B-221ENST00000483778 PPP4CP60510 307 aa22.1■■□□□ 1.13
ATG4B-221ENST00000483778 SPP2Q13103 211 aa22.1■■□□□ 1.13
ATG4B-221ENST00000483778 MAPKAPK5Q8IW41 473 aa22.1■■□□□ 1.13
ATG4B-221ENST00000483778 ZNF512BQ96KM6 892 aaPredicted RBP22.1■■□□□ 1.13
ATG4B-221ENST00000483778 COL2A1P02458 1487 aaPredicted RBP22.09■■□□□ 1.13
ATG4B-221ENST00000483778 CAP2P40123 477 aa22.09■■□□□ 1.13
ATG4B-221ENST00000483778 PRMT2P55345 433 aa22.09■■□□□ 1.13
ATG4B-221ENST00000483778 PRKCZQ05513 592 aa22.09■■□□□ 1.13
ATG4B-221ENST00000483778 EXOC6BQ9Y2D4 811 aa22.09■■□□□ 1.13
ATG4B-221ENST00000483778 CEP290O15078 2479 aa22.09■■□□□ 1.13
ATG4B-221ENST00000483778 LOC285556D6RIA3 1793 aa22.09■■□□□ 1.13
ATG4B-221ENST00000483778 ZBED9Q6R2W3 1325 aa22.08■■□□□ 1.13
ATG4B-221ENST00000483778 MYPNQ86TC9 1320 aa22.08■■□□□ 1.13
ATG4B-221ENST00000483778 ANTXR1Q9H6X2 564 aa22.08■■□□□ 1.13
ATG4B-221ENST00000483778 DNAJC18Q9H819 358 aa22.08■■□□□ 1.13
ATG4B-221ENST00000483778 PALD1Q9ULE6 856 aa22.08■■□□□ 1.13
ATG4B-221ENST00000483778 GRK4P32298 578 aa22.07■■□□□ 1.12
ATG4B-221ENST00000483778 RAET1EQ8TD07 263 aa22.07■■□□□ 1.12
ATG4B-221ENST00000483778 SAP30BPQ9UHR5 308 aaKnown RBP22.07■■□□□ 1.12
ATG4B-221ENST00000483778 AGTPBP1Q9UPW5 1226 aa22.07■■□□□ 1.12
ATG4B-221ENST00000483778 SLC45A1Q9Y2W3 748 aa22.07■■□□□ 1.12
ATG4B-221ENST00000483778 HOXD10P28358 340 aa22.06■■□□□ 1.12
ATG4B-221ENST00000483778 HMGCS2P54868 508 aa22.06■■□□□ 1.12
ATG4B-221ENST00000483778 FCGRTP55899 365 aa22.06■■□□□ 1.12
ATG4B-221ENST00000483778 ZNF280CQ8ND82 737 aa22.06■■□□□ 1.12
ATG4B-221ENST00000483778 SHISA4Q96DD7 197 aa22.06■■□□□ 1.12
ATG4B-221ENST00000483778 NOL10Q9BSC4 688 aaKnown RBP22.06■■□□□ 1.12
ATG4B-221ENST00000483778 PI4KBQ9UBF8 816 aa22.06■■□□□ 1.12
ATG4B-221ENST00000483778 FLT1P17948 1338 aa22.06■■□□□ 1.12
ATG4B-221ENST00000483778 BAG3O95817 575 aa22.05■■□□□ 1.12
ATG4B-221ENST00000483778 CYP7A1P22680 504 aa22.05■■□□□ 1.12
ATG4B-221ENST00000483778 ANKRD13CQ8N6S4 541 aa22.05■■□□□ 1.12
ATG4B-221ENST00000483778 USP17L5A8MUK1 530 aa22.04■■□□□ 1.12
ATG4B-221ENST00000483778 METTL16Q86W50 562 aaKnown RBP22.04■■□□□ 1.12
ATG4B-221ENST00000483778 MIGA1Q8NAN2 632 aa22.04■■□□□ 1.12
ATG4B-221ENST00000483778 IL1RAPL2Q9NP60 686 aa22.04■■□□□ 1.12
ATG4B-221ENST00000483778 HERC5Q9UII4 1024 aaKnown RBP22.04■■□□□ 1.12
ATG4B-221ENST00000483778 PEX10O60683 326 aa22.03■■□□□ 1.12
ATG4B-221ENST00000483778 IDH1O75874 414 aaKnown RBP22.03■■□□□ 1.12
ATG4B-221ENST00000483778 CCL5P13501 91 aa22.03■■□□□ 1.12
ATG4B-221ENST00000483778 ELNP15502 786 aa22.03■■□□□ 1.12
ATG4B-221ENST00000483778 PLCG2P16885 1265 aa22.03■■□□□ 1.12
ATG4B-221ENST00000483778 FLT3LGP49771 235 aa22.03■■□□□ 1.12
ATG4B-221ENST00000483778 AACSQ86V21 672 aa22.03■■□□□ 1.12
ATG4B-221ENST00000483778 SIRT2Q8IXJ6 389 aa22.03■■□□□ 1.12
ATG4B-221ENST00000483778 SMCR8Q8TEV9 937 aaPredicted RBP22.03■■□□□ 1.12
ATG4B-221ENST00000483778 DHX36Q9H2U1 1008 aaKnown RBP22.03■■□□□ 1.12
ATG4B-221ENST00000483778 PLXNB2O15031 1838 aa22.02■■□□□ 1.12
ATG4B-221ENST00000483778 GDF11O95390 407 aa22.02■■□□□ 1.12
ATG4B-221ENST00000483778 FOXP4Q8IVH2 680 aaPredicted RBP22.02■■□□□ 1.12
ATG4B-221ENST00000483778 MAGEB6Q8N7X4 407 aa22.02■■□□□ 1.12
ATG4B-221ENST00000483778 PROCA1Q8NCQ7 364 aaPredicted RBP22.02■■□□□ 1.12
ATG4B-221ENST00000483778 BIN2Q9UBW5 565 aaPredicted RBP22.02■■□□□ 1.12
ATG4B-221ENST00000483778 ADCY3O60266 1144 aa22.01■■□□□ 1.11
ATG4B-221ENST00000483778 SH3D19Q5HYK7 790 aa22.01■■□□□ 1.11
ATG4B-221ENST00000483778 UNC93B1Q9H1C4 597 aa22.01■■□□□ 1.11
ATG4B-221ENST00000483778 ASCC2Q9H1I8 757 aaPredicted RBP22.01■■□□□ 1.11
ATG4B-221ENST00000483778 COG6Q9Y2V7 657 aa22.01■■□□□ 1.11
ATG4B-221ENST00000483778 APBB1O00213 710 aa22■■□□□ 1.11
ATG4B-221ENST00000483778 RHPN1Q8TCX5 695 aa22■■□□□ 1.11
ATG4B-221ENST00000483778 WDR18Q9BV38 432 aa22■■□□□ 1.11
ATG4B-221ENST00000483778 RNF208Q9H0X6 261 aa22■■□□□ 1.11
ATG4B-221ENST00000483778 TNPO2O14787 897 aaKnown RBP21.99■■□□□ 1.11
ATG4B-221ENST00000483778 MTMR2Q13614 643 aa21.99■■□□□ 1.11
ATG4B-221ENST00000483778 BCL11AQ9H165 835 aa21.99■■□□□ 1.11
ATG4B-221ENST00000483778 GJB1P08034 283 aa21.98■■□□□ 1.11
ATG4B-221ENST00000483778 EVX2Q03828 476 aa21.98■■□□□ 1.11
ATG4B-221ENST00000483778 POTEEQ6S8J3 1075 aa21.98■■□□□ 1.11
ATG4B-221ENST00000483778 CRACR2BQ8N4Y2 399 aaPredicted RBP21.98■■□□□ 1.11
ATG4B-221ENST00000483778 P2RX7Q99572 595 aaKnown RBP21.98■■□□□ 1.11
ATG4B-221ENST00000483778 ZBTB40Q9NUA8 1239 aa21.98■■□□□ 1.11
ATG4B-221ENST00000483778 GJA8P48165 433 aa21.97■■□□□ 1.11
ATG4B-221ENST00000483778 BACE1P56817 501 aa21.97■■□□□ 1.11
ATG4B-221ENST00000483778 HABP4Q5JVS0 413 aaKnown RBP21.97■■□□□ 1.11
ATG4B-221ENST00000483778 UBE2Q1Q7Z7E8 422 aa21.97■■□□□ 1.11
ATG4B-221ENST00000483778 ERC1Q8IUD2 1116 aa21.97■■□□□ 1.11
ATG4B-221ENST00000483778 SLAIN1Q8ND83 568 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms