RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 KRI1Q8N9T8 703 aaKnown RBP12.85□□□□□ -0.35
SMPD4-218ENST00000482171 CCDC150Q8NCX0 1101 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 CRACR2AQ9BSW2 395 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 PYCARDQ9ULZ3 195 aa12.85□□□□□ -0.35
SMPD4-218ENST00000482171 CEMIPQ8WUJ3 1361 aa12.84□□□□□ -0.35
SMPD4-218ENST00000482171 ADD2P35612 726 aa12.84□□□□□ -0.35
SMPD4-218ENST00000482171 SCARF1Q14162 830 aa12.84□□□□□ -0.35
SMPD4-218ENST00000482171 LETM2Q2VYF4 491 aa12.84□□□□□ -0.35
SMPD4-218ENST00000482171 C10orf67Q8IYJ2 551 aa12.84□□□□□ -0.35
SMPD4-218ENST00000482171 GPATCH11Q8N954 259 aa12.84□□□□□ -0.35
SMPD4-218ENST00000482171 FTOQ9C0B1 505 aaKnown RBP eCLIP12.84□□□□□ -0.35
SMPD4-218ENST00000482171 CBX8Q9HC52 389 aa12.84□□□□□ -0.35
SMPD4-218ENST00000482171 TNKSO95271 1327 aa12.84□□□□□ -0.35
SMPD4-218ENST00000482171 FOXO4P98177 505 aa12.84□□□□□ -0.35
SMPD4-218ENST00000482171 ZFYVE27Q5T4F4 411 aa12.84□□□□□ -0.35
SMPD4-218ENST00000482171 STAMQ92783 540 aa12.84□□□□□ -0.35
SMPD4-218ENST00000482171 IL25Q9H293 177 aa12.84□□□□□ -0.35
SMPD4-218ENST00000482171 RNF216Q9NWF9 866 aaPredicted RBP12.84□□□□□ -0.35
SMPD4-218ENST00000482171 CALML3P27482 149 aa12.84□□□□□ -0.35
SMPD4-218ENST00000482171 MTIF2P46199 727 aaKnown RBP12.84□□□□□ -0.35
SMPD4-218ENST00000482171 UBE4AQ14139 1066 aa12.84□□□□□ -0.35
SMPD4-218ENST00000482171 TXLNBQ8N3L3 684 aa12.84□□□□□ -0.35
SMPD4-218ENST00000482171 LCORLQ8N3X6 602 aa12.84□□□□□ -0.35
SMPD4-218ENST00000482171 RRP36Q96EU6 259 aaKnown RBP12.84□□□□□ -0.35
SMPD4-218ENST00000482171 ZNF274Q96GC6 653 aaPredicted RBP12.84□□□□□ -0.35
SMPD4-218ENST00000482171 NUP88Q99567 741 aaPredicted RBP12.84□□□□□ -0.35
SMPD4-218ENST00000482171 ISCA1Q9BUE6 129 aa12.84□□□□□ -0.35
SMPD4-218ENST00000482171 CENPHQ9H3R5 247 aa12.84□□□□□ -0.35
SMPD4-218ENST00000482171 MYO1BO43795 1136 aa12.83□□□□□ -0.36
SMPD4-218ENST00000482171 GABPB1Q06547 395 aaPredicted RBP12.83□□□□□ -0.36
SMPD4-218ENST00000482171 INCENPQ9NQS7 918 aa12.83□□□□□ -0.36
SMPD4-218ENST00000482171 N4BP3O15049 544 aa12.83□□□□□ -0.36
SMPD4-218ENST00000482171 PARP1P09874 1014 aaKnown RBP12.83□□□□□ -0.36
SMPD4-218ENST00000482171 TTLL12Q14166 644 aaPredicted RBP12.83□□□□□ -0.36
SMPD4-218ENST00000482171 MYSM1Q5VVJ2 828 aa12.83□□□□□ -0.36
SMPD4-218ENST00000482171 KANK3Q6NY19 840 aa12.83□□□□□ -0.36
SMPD4-218ENST00000482171 CLEC17AQ6ZS10 378 aa12.83□□□□□ -0.36
SMPD4-218ENST00000482171 TTF2Q9UNY4 1162 aaKnown RBP12.83□□□□□ -0.36
SMPD4-218ENST00000482171 NR1I2O75469 434 aa12.83□□□□□ -0.36
SMPD4-218ENST00000482171 ZYXQ15942 572 aaKnown RBP12.83□□□□□ -0.36
SMPD4-218ENST00000482171 ERO1AQ96HE7 468 aa12.83□□□□□ -0.36
SMPD4-218ENST00000482171 TRIM47Q96LD4 638 aa12.83□□□□□ -0.36
SMPD4-218ENST00000482171 C6orf50Q9HD87 102 aa12.83□□□□□ -0.36
SMPD4-218ENST00000482171 STK32BQ9NY57 414 aa12.83□□□□□ -0.36
SMPD4-218ENST00000482171 H0YIN7 160 aa12.82□□□□□ -0.36
SMPD4-218ENST00000482171 SERPINB2P05120 415 aa12.82□□□□□ -0.36
SMPD4-218ENST00000482171 KIAA0825Q8IV33 1275 aa12.82□□□□□ -0.36
SMPD4-218ENST00000482171 GBP3Q9H0R5 595 aa12.82□□□□□ -0.36
SMPD4-218ENST00000482171 SEPT11Q9NVA2 429 aaKnown RBP12.82□□□□□ -0.36
SMPD4-218ENST00000482171 IFNKQ9P0W0 207 aa12.82□□□□□ -0.36
SMPD4-218ENST00000482171 HDAC9Q9UKV0 1011 aa12.82□□□□□ -0.36
SMPD4-218ENST00000482171 USP32Q8NFA0 1604 aa12.82□□□□□ -0.36
SMPD4-218ENST00000482171 BTBD18B2RXH4 712 aa12.82□□□□□ -0.36
SMPD4-218ENST00000482171 POLR2DO15514 142 aaKnown RBP12.82□□□□□ -0.36
SMPD4-218ENST00000482171 ZNF75DP51815 510 aa12.82□□□□□ -0.36
SMPD4-218ENST00000482171 RILPL1Q5EBL4 403 aa12.82□□□□□ -0.36
SMPD4-218ENST00000482171 IPO4Q8TEX9 1081 aaKnown RBP12.82□□□□□ -0.36
SMPD4-218ENST00000482171 GJB4Q9NTQ9 266 aa12.82□□□□□ -0.36
SMPD4-218ENST00000482171 MAPK8IP1Q9UQF2 711 aa12.82□□□□□ -0.36
SMPD4-218ENST00000482171 ITSN1Q15811 1721 aa12.82□□□□□ -0.36
SMPD4-218ENST00000482171 BMP15O95972 392 aa12.82□□□□□ -0.36
SMPD4-218ENST00000482171 CYP2E1P05181 493 aaPredicted RBP12.82□□□□□ -0.36
SMPD4-218ENST00000482171 CHMP4BP1P59074 171 aa12.82□□□□□ -0.36
SMPD4-218ENST00000482171 ASIC1P78348 528 aa12.82□□□□□ -0.36
SMPD4-218ENST00000482171 DIXDC1Q155Q3 683 aa12.82□□□□□ -0.36
SMPD4-218ENST00000482171 KIAA1328Q86T90 577 aa12.82□□□□□ -0.36
SMPD4-218ENST00000482171 CELF1Q92879 486 aaKnown RBP12.82□□□□□ -0.36
SMPD4-218ENST00000482171 SAMM50Q9Y512 469 aa12.82□□□□□ -0.36
SMPD4-218ENST00000482171 PHACTR2O75167 634 aa12.81□□□□□ -0.36
SMPD4-218ENST00000482171 GOLGA8HP0CJ92 632 aa12.81□□□□□ -0.36
SMPD4-218ENST00000482171 AIFM3Q96NN9 605 aa12.81□□□□□ -0.36
SMPD4-218ENST00000482171 RBM28Q9NW13 759 aaKnown RBP12.81□□□□□ -0.36
SMPD4-218ENST00000482171 KCNH3Q9ULD8 1083 aa12.81□□□□□ -0.36
SMPD4-218ENST00000482171 SIGLEC1Q9BZZ2 1709 aa12.81□□□□□ -0.36
SMPD4-218ENST00000482171 ZNF202O95125 648 aa12.81□□□□□ -0.36
SMPD4-218ENST00000482171 DNA2P51530 1060 aa12.81□□□□□ -0.36
SMPD4-218ENST00000482171 FANCBQ8NB91 859 aa12.81□□□□□ -0.36
SMPD4-218ENST00000482171 NSUN7Q8NE18 718 aaKnown RBP12.81□□□□□ -0.36
SMPD4-218ENST00000482171 CLSTN2Q9H4D0 955 aa12.81□□□□□ -0.36
SMPD4-218ENST00000482171 RSPH14Q9UHP6 348 aa12.81□□□□□ -0.36
SMPD4-218ENST00000482171 A0A087WWV3 80 aa12.81□□□□□ -0.36
SMPD4-218ENST00000482171 TCERG1LQ5VWI1 586 aa12.81□□□□□ -0.36
SMPD4-218ENST00000482171 ATG9AQ7Z3C6 839 aa12.81□□□□□ -0.36
SMPD4-218ENST00000482171 JDP2Q8WYK2 163 aa12.81□□□□□ -0.36
SMPD4-218ENST00000482171 CAPN2P17655 700 aa12.8□□□□□ -0.36
SMPD4-218ENST00000482171 CCDC181Q5TID7 509 aa12.8□□□□□ -0.36
SMPD4-218ENST00000482171 APOA5Q6Q788 366 aa12.8□□□□□ -0.36
SMPD4-218ENST00000482171 DTHD1Q6ZMT9 781 aa12.8□□□□□ -0.36
SMPD4-218ENST00000482171 ZNF215Q9UL58 517 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-218ENST00000482171 THRAP3Q9Y2W1 955 aaKnown RBP12.8□□□□□ -0.36
SMPD4-218ENST00000482171 USP8P40818 1118 aa12.8□□□□□ -0.36
SMPD4-218ENST00000482171 CDR1P51861 262 aa12.8□□□□□ -0.36
SMPD4-218ENST00000482171 CACNA2D4Q7Z3S7 1137 aa12.8□□□□□ -0.36
SMPD4-218ENST00000482171 MARCH10Q8NA82 808 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-218ENST00000482171 FKBP15Q5T1M5 1219 aa12.8□□□□□ -0.36
SMPD4-218ENST00000482171 TBC1D9BQ66K14 1250 aa12.8□□□□□ -0.36
SMPD4-218ENST00000482171 KRT27Q7Z3Y8 459 aa12.8□□□□□ -0.36
SMPD4-218ENST00000482171 LARGE2Q8N3Y3 721 aa12.8□□□□□ -0.36
SMPD4-218ENST00000482171 EXOC1Q9NV70 894 aa12.8□□□□□ -0.36
SMPD4-218ENST00000482171 GNA11P29992 359 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms