RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 GPAT2Q6NUI2 795 aa27.12■■□□□ 1.93
GPCPD1-206ENST00000481690 FASTKD5Q7L8L6 764 aaKnown RBP27.12■■□□□ 1.93
GPCPD1-206ENST00000481690 MAPKAPK5Q8IW41 473 aa27.12■■□□□ 1.93
GPCPD1-206ENST00000481690 TGFBRAP1Q8WUH2 860 aa27.12■■□□□ 1.93
GPCPD1-206ENST00000481690 BCL11AQ9H165 835 aa27.12■■□□□ 1.93
GPCPD1-206ENST00000481690 MGAMO43451 1857 aa27.11■■□□□ 1.93
GPCPD1-206ENST00000481690 CYP2C8P10632 490 aa27.11■■□□□ 1.93
GPCPD1-206ENST00000481690 CYP7A1P22680 504 aa27.11■■□□□ 1.93
GPCPD1-206ENST00000481690 SLC9C1Q4G0N8 1177 aa27.11■■□□□ 1.93
GPCPD1-206ENST00000481690 RHPN1Q8TCX5 695 aa27.11■■□□□ 1.93
GPCPD1-206ENST00000481690 ARMC5Q96C12 935 aa27.11■■□□□ 1.93
GPCPD1-206ENST00000481690 MYH1P12882 1939 aa27.11■■□□□ 1.93
GPCPD1-206ENST00000481690 ADGRA2Q96PE1 1338 aa27.11■■□□□ 1.93
GPCPD1-206ENST00000481690 HMMRO75330 724 aa27.1■■□□□ 1.93
GPCPD1-206ENST00000481690 PPP4CP60510 307 aa27.1■■□□□ 1.93
GPCPD1-206ENST00000481690 RPAP2Q8IXW5 612 aaPredicted RBP27.1■■□□□ 1.93
GPCPD1-206ENST00000481690 FLT1P17948 1338 aa27.1■■□□□ 1.93
GPCPD1-206ENST00000481690 HTTP42858 3142 aa27.09■■□□□ 1.93
GPCPD1-206ENST00000481690 IGSF3O75054 1194 aa27.09■■□□□ 1.93
GPCPD1-206ENST00000481690 DHX36Q9H2U1 1008 aaKnown RBP27.09■■□□□ 1.93
GPCPD1-206ENST00000481690 ZBTB40Q9NUA8 1239 aa27.09■■□□□ 1.93
GPCPD1-206ENST00000481690 PI4KBQ9UBF8 816 aa27.09■■□□□ 1.93
GPCPD1-206ENST00000481690 HERC5Q9UII4 1024 aaKnown RBP27.09■■□□□ 1.93
GPCPD1-206ENST00000481690 POTEFA5A3E0 1075 aa27.08■■□□□ 1.93
GPCPD1-206ENST00000481690 PSMC4P43686 418 aa27.08■■□□□ 1.93
GPCPD1-206ENST00000481690 DYNLL1P63167 89 aaKnown RBP27.08■■□□□ 1.93
GPCPD1-206ENST00000481690 MAGEB6Q8N7X4 407 aa27.08■■□□□ 1.93
GPCPD1-206ENST00000481690 TRIM34Q9BYJ4 488 aa27.08■■□□□ 1.93
GPCPD1-206ENST00000481690 ANTXR1Q9H6X2 564 aa27.08■■□□□ 1.93
GPCPD1-206ENST00000481690 KIAA0100Q14667 2235 aaKnown RBP27.08■■□□□ 1.92
GPCPD1-206ENST00000481690 LOC285556D6RIA3 1793 aa27.07■■□□□ 1.92
GPCPD1-206ENST00000481690 GNRH1P01148 92 aa27.07■■□□□ 1.92
GPCPD1-206ENST00000481690 NBPF11Q86T75 865 aa27.07■■□□□ 1.92
GPCPD1-206ENST00000481690 CLASRPQ8N2M8 674 aaKnown RBP27.07■■□□□ 1.92
GPCPD1-206ENST00000481690 MIGA1Q8NAN2 632 aa27.07■■□□□ 1.92
GPCPD1-206ENST00000481690 KIF1BPQ96EK5 621 aa27.07■■□□□ 1.92
GPCPD1-206ENST00000481690 CHMP4BQ9H444 224 aaKnown RBP27.07■■□□□ 1.92
GPCPD1-206ENST00000481690 SAP30BPQ9UHR5 308 aaKnown RBP27.07■■□□□ 1.92
GPCPD1-206ENST00000481690 FMNL1O95466 1100 aaPredicted RBP27.06■■□□□ 1.92
GPCPD1-206ENST00000481690 CTGFP29279 349 aa27.06■■□□□ 1.92
GPCPD1-206ENST00000481690 CAP2P40123 477 aa27.06■■□□□ 1.92
GPCPD1-206ENST00000481690 SIRT2Q8IXJ6 389 aa27.06■■□□□ 1.92
GPCPD1-206ENST00000481690 CRACR2BQ8N4Y2 399 aaPredicted RBP27.06■■□□□ 1.92
GPCPD1-206ENST00000481690 MYCP01106 439 aaPredicted RBP27.05■■□□□ 1.92
GPCPD1-206ENST00000481690 MAP3K12Q12852 859 aa27.05■■□□□ 1.92
GPCPD1-206ENST00000481690 RRP1BQ14684 758 aaKnown RBP27.05■■□□□ 1.92
GPCPD1-206ENST00000481690 SLC4A8Q2Y0W8 1093 aa27.05■■□□□ 1.92
GPCPD1-206ENST00000481690 ZNF333Q96JL9 665 aa27.05■■□□□ 1.92
GPCPD1-206ENST00000481690 TRIM47Q96LD4 638 aa27.05■■□□□ 1.92
GPCPD1-206ENST00000481690 PALD1Q9ULE6 856 aa27.05■■□□□ 1.92
GPCPD1-206ENST00000481690 IFIT2P09913 472 aaKnown RBP27.04■■□□□ 1.92
GPCPD1-206ENST00000481690 PRMT2P55345 433 aa27.04■■□□□ 1.92
GPCPD1-206ENST00000481690 SPP2Q13103 211 aa27.04■■□□□ 1.92
GPCPD1-206ENST00000481690 SMCR8Q8TEV9 937 aaPredicted RBP27.04■■□□□ 1.92
GPCPD1-206ENST00000481690 SH3TC2Q8TF17 1288 aa27.04■■□□□ 1.92
GPCPD1-206ENST00000481690 TMEM106CQ9BVX2 250 aa27.04■■□□□ 1.92
GPCPD1-206ENST00000481690 AGTPBP1Q9UPW5 1226 aa27.04■■□□□ 1.92
GPCPD1-206ENST00000481690 SLC45A1Q9Y2W3 748 aa27.04■■□□□ 1.92
GPCPD1-206ENST00000481690 HLA-DOAP06340 250 aa27.03■■□□□ 1.92
GPCPD1-206ENST00000481690 BCRP11274 1271 aa27.03■■□□□ 1.92
GPCPD1-206ENST00000481690 OSBPP22059 807 aa27.03■■□□□ 1.92
GPCPD1-206ENST00000481690 USP5P45974 858 aa27.03■■□□□ 1.92
GPCPD1-206ENST00000481690 C20orf194Q5TEA3 1177 aa27.03■■□□□ 1.92
GPCPD1-206ENST00000481690 ZNF280CQ8ND82 737 aa27.03■■□□□ 1.92
GPCPD1-206ENST00000481690 USP17L5A8MUK1 530 aa27.02■■□□□ 1.92
GPCPD1-206ENST00000481690 HOXD10P28358 340 aa27.02■■□□□ 1.92
GPCPD1-206ENST00000481690 FCGRTP55899 365 aa27.02■■□□□ 1.92
GPCPD1-206ENST00000481690 TREML2Q5T2D2 321 aa27.02■■□□□ 1.92
GPCPD1-206ENST00000481690 TBC1D2Q9BYX2 928 aa27.02■■□□□ 1.92
GPCPD1-206ENST00000481690 DNAJC18Q9H819 358 aa27.02■■□□□ 1.92
GPCPD1-206ENST00000481690 AS3MTQ9HBK9 375 aa27.02■■□□□ 1.92
GPCPD1-206ENST00000481690 SRRDQ9UH36 339 aa27.02■■□□□ 1.92
GPCPD1-206ENST00000481690 NAV1Q8NEY1 1877 aa27.02■■□□□ 1.92
GPCPD1-206ENST00000481690 MYPNQ86TC9 1320 aa27.01■■□□□ 1.91
GPCPD1-206ENST00000481690 HMGCS2P54868 508 aa27.01■■□□□ 1.91
GPCPD1-206ENST00000481690 TTF1Q15361 905 aaPredicted RBP27.01■■□□□ 1.91
GPCPD1-206ENST00000481690 CERS3Q8IU89 383 aa27.01■■□□□ 1.91
GPCPD1-206ENST00000481690 FOXP4Q8IVH2 680 aaPredicted RBP27.01■■□□□ 1.91
GPCPD1-206ENST00000481690 PROCA1Q8NCQ7 364 aaPredicted RBP27.01■■□□□ 1.91
GPCPD1-206ENST00000481690 RAET1EQ8TD07 263 aa27.01■■□□□ 1.91
GPCPD1-206ENST00000481690 DNAJC2Q99543 621 aaKnown RBP27.01■■□□□ 1.91
GPCPD1-206ENST00000481690 PNMA3Q9UL41 463 aa27.01■■□□□ 1.91
GPCPD1-206ENST00000481690 RAB11FIP3O75154 756 aa27■■□□□ 1.91
GPCPD1-206ENST00000481690 GDF11O95390 407 aa27■■□□□ 1.91
GPCPD1-206ENST00000481690 EN2P19622 333 aaPredicted RBP27■■□□□ 1.91
GPCPD1-206ENST00000481690 PDE3AQ14432 1141 aa26.99■■□□□ 1.91
GPCPD1-206ENST00000481690 GOLIM4O00461 696 aa26.98■■□□□ 1.91
GPCPD1-206ENST00000481690 ASNSP08243 561 aa26.98■■□□□ 1.91
GPCPD1-206ENST00000481690 PRKCZQ05513 592 aa26.97■■□□□ 1.91
GPCPD1-206ENST00000481690 MTMR2Q13614 643 aa26.97■■□□□ 1.91
GPCPD1-206ENST00000481690 SHROOM1Q2M3G4 852 aaPredicted RBP26.97■■□□□ 1.91
GPCPD1-206ENST00000481690 TMED8Q6PL24 325 aaPredicted RBP26.97■■□□□ 1.91
GPCPD1-206ENST00000481690 METTL16Q86W50 562 aaKnown RBP26.97■■□□□ 1.91
GPCPD1-206ENST00000481690 ANKRD13CQ8N6S4 541 aa26.97■■□□□ 1.91
GPCPD1-206ENST00000481690 CENPFP49454 3210 aa26.97■■□□□ 1.91
GPCPD1-206ENST00000481690 DDX60LQ5H9U9 1706 aaKnown RBP26.96■■□□□ 1.91
GPCPD1-206ENST00000481690 MAGEB6P1A0A0J9YX57 407 aa26.96■■□□□ 1.91
GPCPD1-206ENST00000481690 PDE6AP16499 860 aa26.96■■□□□ 1.91
GPCPD1-206ENST00000481690 JAG1P78504 1218 aa26.96■■□□□ 1.91
GPCPD1-206ENST00000481690 PABPC4Q13310 644 aaKnown RBP eCLIP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms