RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, human

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-222	ENST00000478095	INPP5B	P32019	993 aa		12.38	□□□□□ -0.43
HDAC6-222	ENST00000478095	VGLL4	Q14135	290 aa		12.38	□□□□□ -0.43
HDAC6-222	ENST00000478095	CENPQ	Q7L2Z9	268 aa	Predicted RBP	12.38	□□□□□ -0.43
HDAC6-222	ENST00000478095	SKAP1	Q86WV1	359 aa		12.38	□□□□□ -0.43
HDAC6-222	ENST00000478095	CERS3	Q8IU89	383 aa		12.38	□□□□□ -0.43
HDAC6-222	ENST00000478095	ANKRD13A	Q8IZ07	590 aa		12.38	□□□□□ -0.43
HDAC6-222	ENST00000478095	APPBP2	Q92624	585 aa		12.38	□□□□□ -0.43
HDAC6-222	ENST00000478095	ZKSCAN4	Q969J2	545 aa	Predicted RBP	12.38	□□□□□ -0.43
HDAC6-222	ENST00000478095	OSBP2	Q969R2	916 aa		12.38	□□□□□ -0.43
HDAC6-222	ENST00000478095	RILPL2	Q969X0	211 aa		12.38	□□□□□ -0.43
HDAC6-222	ENST00000478095	AIDA	Q96BJ3	306 aa		12.38	□□□□□ -0.43
HDAC6-222	ENST00000478095	EVI5L	Q96CN4	794 aa		12.38	□□□□□ -0.43
HDAC6-222	ENST00000478095	CCDC136	Q96JN2	1154 aa		12.38	□□□□□ -0.43
HDAC6-222	ENST00000478095	CRNKL1	Q9BZJ0	848 aa	Known RBP	12.38	□□□□□ -0.43
HDAC6-222	ENST00000478095	OSBPL3	Q9H4L5	887 aa		12.38	□□□□□ -0.43
HDAC6-222	ENST00000478095	ELP3	Q9H9T3	547 aa		12.38	□□□□□ -0.43
HDAC6-222	ENST00000478095	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.38	□□□□□ -0.43
HDAC6-222	ENST00000478095	TRPM7	Q96QT4	1865 aa		12.38	□□□□□ -0.43
HDAC6-222	ENST00000478095	DOCK2	Q92608	1830 aa		12.37	□□□□□ -0.43
HDAC6-222	ENST00000478095		M0R2C6	588 aa		12.37	□□□□□ -0.43
HDAC6-222	ENST00000478095	ZFY	P08048	801 aa	Predicted RBP	12.37	□□□□□ -0.43
HDAC6-222	ENST00000478095	MAP3K9	P80192	1104 aa		12.37	□□□□□ -0.43
HDAC6-222	ENST00000478095	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	12.37	□□□□□ -0.43
HDAC6-222	ENST00000478095	JMY	Q8N9B5	988 aa		12.37	□□□□□ -0.43
HDAC6-222	ENST00000478095	CCDC102A	Q96A19	550 aa		12.37	□□□□□ -0.43
HDAC6-222	ENST00000478095	SLC10A4	Q96EP9	437 aa		12.37	□□□□□ -0.43
HDAC6-222	ENST00000478095	MS4A3	Q96HJ5	214 aa		12.37	□□□□□ -0.43
HDAC6-222	ENST00000478095	SEC62	Q99442	399 aa	Known RBP	12.37	□□□□□ -0.43
HDAC6-222	ENST00000478095	CSAD	Q9Y600	493 aa		12.37	□□□□□ -0.43
HDAC6-222	ENST00000478095	MAP3K13	O43283	966 aa		12.36	□□□□□ -0.43
HDAC6-222	ENST00000478095	KIF23	Q02241	960 aa	Predicted RBP	12.36	□□□□□ -0.43
HDAC6-222	ENST00000478095	NOG	Q13253	232 aa		12.36	□□□□□ -0.43
HDAC6-222	ENST00000478095	LRRFIP1	Q32MZ4	808 aa	Known RBP	12.36	□□□□□ -0.43
HDAC6-222	ENST00000478095	DHX36	Q9H2U1	1008 aa	Known RBP	12.36	□□□□□ -0.43
HDAC6-222	ENST00000478095	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	12.36	□□□□□ -0.43
HDAC6-222	ENST00000478095	MCM9	Q9NXL9	1143 aa		12.36	□□□□□ -0.43
HDAC6-222	ENST00000478095	SNCAIP	Q9Y6H5	919 aa		12.36	□□□□□ -0.43
HDAC6-222	ENST00000478095	SLC4A4	Q9Y6R1	1079 aa		12.36	□□□□□ -0.43
HDAC6-222	ENST00000478095	MYO5A	Q9Y4I1	1855 aa	Known RBP	12.36	□□□□□ -0.43
HDAC6-222	ENST00000478095	COL2A1	P02458	1487 aa	Predicted RBP	12.35	□□□□□ -0.43
HDAC6-222	ENST00000478095	PHF20L1	A8MW92	1017 aa		12.35	□□□□□ -0.43
HDAC6-222	ENST00000478095	GPAA1	O43292	621 aa		12.35	□□□□□ -0.43
HDAC6-222	ENST00000478095	HLA-DOA	P06340	250 aa		12.35	□□□□□ -0.43
HDAC6-222	ENST00000478095	GSPT1	P15170	499 aa	Known RBP	12.35	□□□□□ -0.43
HDAC6-222	ENST00000478095	GJA5	P36382	358 aa		12.35	□□□□□ -0.43
HDAC6-222	ENST00000478095	SPRYD7	Q5W111	196 aa		12.35	□□□□□ -0.43
HDAC6-222	ENST00000478095	CCDC129	Q6ZRS4	1044 aa		12.35	□□□□□ -0.43
HDAC6-222	ENST00000478095	OPTN	Q96CV9	577 aa		12.35	□□□□□ -0.43
HDAC6-222	ENST00000478095	OTUD5	Q96G74	571 aa		12.35	□□□□□ -0.43
HDAC6-222	ENST00000478095	WNK4	Q96J92	1243 aa		12.35	□□□□□ -0.43
HDAC6-222	ENST00000478095	STRBP	Q96SI9	672 aa	Known RBP	12.35	□□□□□ -0.43
HDAC6-222	ENST00000478095	DNAJC18	Q9H819	358 aa		12.35	□□□□□ -0.43
HDAC6-222	ENST00000478095	DCP1A	Q9NPI6	582 aa	Predicted RBP	12.35	□□□□□ -0.43
HDAC6-222	ENST00000478095	PI4KB	Q9UBF8	816 aa		12.35	□□□□□ -0.43
HDAC6-222	ENST00000478095	POLR3D	P05423	398 aa	Predicted RBP	12.34	□□□□□ -0.43
HDAC6-222	ENST00000478095	CYP2D6	P10635	497 aa		12.34	□□□□□ -0.43
HDAC6-222	ENST00000478095	PYGB	P11216	843 aa		12.34	□□□□□ -0.43
HDAC6-222	ENST00000478095	MAP2K2	P36507	400 aa		12.34	□□□□□ -0.43
HDAC6-222	ENST00000478095	ZMYM1	Q5SVZ6	1142 aa		12.34	□□□□□ -0.43
HDAC6-222	ENST00000478095	TTC22	Q5TAA0	569 aa		12.34	□□□□□ -0.43
HDAC6-222	ENST00000478095	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	12.34	□□□□□ -0.43
HDAC6-222	ENST00000478095	FAM227B	Q96M60	508 aa		12.34	□□□□□ -0.43
HDAC6-222	ENST00000478095	TRIM34	Q9BYJ4	488 aa		12.34	□□□□□ -0.43
HDAC6-222	ENST00000478095	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	12.34	□□□□□ -0.43
HDAC6-222	ENST00000478095	ZNF112	Q9UJU3	913 aa		12.34	□□□□□ -0.43
HDAC6-222	ENST00000478095	CYP2D7	A0A087X1C5	515 aa		12.33	□□□□□ -0.44
HDAC6-222	ENST00000478095		A0A0D9SFI3	127 aa		12.33	□□□□□ -0.44
HDAC6-222	ENST00000478095	SPDYE5	A6NIY4	337 aa		12.33	□□□□□ -0.44
HDAC6-222	ENST00000478095	UNCX	A6NJT0	531 aa		12.33	□□□□□ -0.44
HDAC6-222	ENST00000478095	TBC1D12	O60347	775 aa		12.33	□□□□□ -0.44
HDAC6-222	ENST00000478095	HSPA1A	P0DMV8	641 aa	Known RBP	12.33	□□□□□ -0.44
HDAC6-222	ENST00000478095	HSPA1B	P0DMV9	641 aa	Known RBP	12.33	□□□□□ -0.44
HDAC6-222	ENST00000478095	PLCD1	P51178	756 aa		12.33	□□□□□ -0.44
HDAC6-222	ENST00000478095	MAP3K10	Q02779	954 aa		12.33	□□□□□ -0.44
HDAC6-222	ENST00000478095	NMI	Q13287	307 aa	Predicted RBP	12.33	□□□□□ -0.44
HDAC6-222	ENST00000478095	RRP1B	Q14684	758 aa	Known RBP	12.33	□□□□□ -0.44
HDAC6-222	ENST00000478095	TTC6	Q86TZ1	520 aa		12.33	□□□□□ -0.44
HDAC6-222	ENST00000478095	CCDC84	Q86UT8	332 aa	Predicted RBP	12.33	□□□□□ -0.44
HDAC6-222	ENST00000478095	SCYL3	Q8IZE3	742 aa		12.33	□□□□□ -0.44
HDAC6-222	ENST00000478095	ATP8A2	Q9NTI2	1148 aa		12.33	□□□□□ -0.44
HDAC6-222	ENST00000478095	HERC5	Q9UII4	1024 aa	Known RBP	12.33	□□□□□ -0.44
HDAC6-222	ENST00000478095	PCDHB13	Q9Y5F0	798 aa		12.33	□□□□□ -0.44
HDAC6-222	ENST00000478095	GSG1L2	A8MUP6	293 aa		12.32	□□□□□ -0.44
HDAC6-222	ENST00000478095	SMIM22	K7EJ46	135 aa		12.32	□□□□□ -0.44
HDAC6-222	ENST00000478095	GDF11	O95390	407 aa		12.32	□□□□□ -0.44
HDAC6-222	ENST00000478095	APP	P05067	770 aa		12.32	□□□□□ -0.44
HDAC6-222	ENST00000478095	ZBTB48	P10074	688 aa	Predicted RBP	12.32	□□□□□ -0.44
HDAC6-222	ENST00000478095	SDS	P20132	328 aa		12.32	□□□□□ -0.44
HDAC6-222	ENST00000478095	MAP2K1	Q02750	393 aa	Predicted RBP	12.32	□□□□□ -0.44
HDAC6-222	ENST00000478095	SHROOM1	Q2M3G4	852 aa	Predicted RBP	12.32	□□□□□ -0.44
HDAC6-222	ENST00000478095	NOL9	Q5SY16	702 aa	Known RBP	12.32	□□□□□ -0.44
HDAC6-222	ENST00000478095	DDRGK1	Q96HY6	314 aa		12.32	□□□□□ -0.44
HDAC6-222	ENST00000478095	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	12.32	□□□□□ -0.44
HDAC6-222	ENST00000478095	WBP1L	Q9NX94	342 aa		12.32	□□□□□ -0.44
HDAC6-222	ENST00000478095	SERPINB13	Q9UIV8	391 aa		12.32	□□□□□ -0.44
HDAC6-222	ENST00000478095	USP17L12	C9JPN9	530 aa		12.31	□□□□□ -0.44
HDAC6-222	ENST00000478095	USP17L21	D6R901	530 aa		12.31	□□□□□ -0.44
HDAC6-222	ENST00000478095	CTR9	Q6PD62	1173 aa		12.31	□□□□□ -0.44
HDAC6-222	ENST00000478095	ERO1B	Q86YB8	467 aa		12.31	□□□□□ -0.44
HDAC6-222	ENST00000478095	FOXP4	Q8IVH2	680 aa	Predicted RBP	12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms