RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 ZBTB7AO95365 584 aa13.53□□□□□ -0.24
SGSM3-209ENST00000478085 ADRA2BP18089 450 aa13.53□□□□□ -0.24
SGSM3-209ENST00000478085 KRI1Q8N9T8 703 aaKnown RBP13.53□□□□□ -0.24
SGSM3-209ENST00000478085 STRBPQ96SI9 672 aaKnown RBP13.53□□□□□ -0.24
SGSM3-209ENST00000478085 ZSWIM5Q9P217 1185 aa13.53□□□□□ -0.24
SGSM3-209ENST00000478085 MTMR6Q9Y217 621 aa13.53□□□□□ -0.24
SGSM3-209ENST00000478085 LARGE1O95461 756 aa13.52□□□□□ -0.24
SGSM3-209ENST00000478085 LIG1P18858 919 aa13.52□□□□□ -0.24
SGSM3-209ENST00000478085 IBSPP21815 317 aaPredicted RBP13.52□□□□□ -0.24
SGSM3-209ENST00000478085 TYRO3Q06418 890 aa13.52□□□□□ -0.24
SGSM3-209ENST00000478085 DTHD1Q6ZMT9 781 aa13.52□□□□□ -0.24
SGSM3-209ENST00000478085 ARHGAP27Q6ZUM4 889 aa13.52□□□□□ -0.24
SGSM3-209ENST00000478085 KAZALD1Q96I82 304 aa13.52□□□□□ -0.24
SGSM3-209ENST00000478085 MYCNP04198 464 aaPredicted RBP13.52□□□□□ -0.25
SGSM3-209ENST00000478085 TOP1P11387 765 aaKnown RBP13.52□□□□□ -0.25
SGSM3-209ENST00000478085 NPR1P16066 1061 aa13.52□□□□□ -0.25
SGSM3-209ENST00000478085 MATR3P43243 847 aaKnown RBP eCLIP13.52□□□□□ -0.25
SGSM3-209ENST00000478085 CPXCR1Q8N123 301 aa13.52□□□□□ -0.25
SGSM3-209ENST00000478085 MRPL12P52815 198 aaKnown RBP13.52□□□□□ -0.25
SGSM3-209ENST00000478085 ZFYVE27Q5T4F4 411 aa13.52□□□□□ -0.25
SGSM3-209ENST00000478085 PDCL3Q9H2J4 239 aa13.52□□□□□ -0.25
SGSM3-209ENST00000478085 LMBRD1Q9NUN5 540 aa13.52□□□□□ -0.25
SGSM3-209ENST00000478085 PXDNQ92626 1479 aa13.52□□□□□ -0.25
SGSM3-209ENST00000478085 ATP10DQ9P241 1426 aa13.51□□□□□ -0.25
SGSM3-209ENST00000478085 TRAF1Q13077 416 aa13.51□□□□□ -0.25
SGSM3-209ENST00000478085 ENOX2Q16206 610 aaKnown RBP13.51□□□□□ -0.25
SGSM3-209ENST00000478085 SLC27A3Q5K4L6 730 aa13.51□□□□□ -0.25
SGSM3-209ENST00000478085 RRAGBQ5VZM2 374 aa13.51□□□□□ -0.25
SGSM3-209ENST00000478085 ZNF408Q9H9D4 720 aa13.51□□□□□ -0.25
SGSM3-209ENST00000478085 LRRC47Q8N1G4 583 aaKnown RBP13.51□□□□□ -0.25
SGSM3-209ENST00000478085 APOA5Q6Q788 366 aa13.51□□□□□ -0.25
SGSM3-209ENST00000478085 FAM200AQ8TCP9 573 aa13.51□□□□□ -0.25
SGSM3-209ENST00000478085 DYNLL2Q96FJ2 89 aa13.51□□□□□ -0.25
SGSM3-209ENST00000478085 ARID4AP29374 1257 aaPredicted RBP13.5□□□□□ -0.25
SGSM3-209ENST00000478085 NF2P35240 595 aa13.5□□□□□ -0.25
SGSM3-209ENST00000478085 AOPEPQ8N6M6 819 aa13.5□□□□□ -0.25
SGSM3-209ENST00000478085 BTBD18B2RXH4 712 aa13.5□□□□□ -0.25
SGSM3-209ENST00000478085 STX17P56962 302 aa13.5□□□□□ -0.25
SGSM3-209ENST00000478085 INTS5Q6P9B9 1019 aaKnown RBP13.5□□□□□ -0.25
SGSM3-209ENST00000478085 ERCC4Q92889 916 aaPredicted RBP13.5□□□□□ -0.25
SGSM3-209ENST00000478085 USH1GQ495M9 461 aa13.5□□□□□ -0.25
SGSM3-209ENST00000478085 TMC6Q7Z403 805 aa13.5□□□□□ -0.25
SGSM3-209ENST00000478085 MASTLQ96GX5 879 aa13.5□□□□□ -0.25
SGSM3-209ENST00000478085 ZNF830Q96NB3 372 aaPredicted RBP13.5□□□□□ -0.25
SGSM3-209ENST00000478085 ARHGEF10LQ9HCE6 1279 aa13.5□□□□□ -0.25
SGSM3-209ENST00000478085 KDM6AO15550 1401 aaPredicted RBP13.5□□□□□ -0.25
SGSM3-209ENST00000478085 CSF1RP07333 972 aa13.5□□□□□ -0.25
SGSM3-209ENST00000478085 MTIF2P46199 727 aaKnown RBP13.5□□□□□ -0.25
SGSM3-209ENST00000478085 ASIC1P78348 528 aa13.5□□□□□ -0.25
SGSM3-209ENST00000478085 PPP2R5BQ15173 497 aa13.5□□□□□ -0.25
SGSM3-209ENST00000478085 KRT79Q5XKE5 535 aa13.5□□□□□ -0.25
SGSM3-209ENST00000478085 TMC4Q7Z404 712 aa13.5□□□□□ -0.25
SGSM3-209ENST00000478085 FAM84BQ96KN1 310 aaPredicted RBP13.5□□□□□ -0.25
SGSM3-209ENST00000478085 USP28Q96RU2 1077 aa13.5□□□□□ -0.25
SGSM3-209ENST00000478085 CD209Q9NNX6 404 aa13.5□□□□□ -0.25
SGSM3-209ENST00000478085 KLRF2D3W0D1 207 aa13.49□□□□□ -0.25
SGSM3-209ENST00000478085 H7C1D1 291 aa13.49□□□□□ -0.25
SGSM3-209ENST00000478085 PKD2L1Q9P0L9 805 aa13.49□□□□□ -0.25
SGSM3-209ENST00000478085 CARMIL3Q8ND23 1372 aa13.49□□□□□ -0.25
SGSM3-209ENST00000478085 WDHD1O75717 1129 aaPredicted RBP13.49□□□□□ -0.25
SGSM3-209ENST00000478085 SYCP1Q15431 976 aa13.49□□□□□ -0.25
SGSM3-209ENST00000478085 RC3H1Q5TC82 1133 aaKnown RBP13.49□□□□□ -0.25
SGSM3-209ENST00000478085 TCERG1LQ5VWI1 586 aa13.49□□□□□ -0.25
SGSM3-209ENST00000478085 CCDC70Q6NSX1 233 aa13.49□□□□□ -0.25
SGSM3-209ENST00000478085 TRMT1Q9NXH9 659 aaKnown RBP13.49□□□□□ -0.25
SGSM3-209ENST00000478085 FRMPD2Q68DX3 1309 aaPredicted RBP13.49□□□□□ -0.25
SGSM3-209ENST00000478085 CACNB3P54284 484 aa13.49□□□□□ -0.25
SGSM3-209ENST00000478085 FAM160A1Q05DH4 1040 aa13.49□□□□□ -0.25
SGSM3-209ENST00000478085 CERKLQ49MI3 558 aaPredicted RBP13.49□□□□□ -0.25
SGSM3-209ENST00000478085 MYSM1Q5VVJ2 828 aa13.49□□□□□ -0.25
SGSM3-209ENST00000478085 ATL3Q6DD88 541 aa13.49□□□□□ -0.25
SGSM3-209ENST00000478085 TTLL6Q8N841 843 aa13.49□□□□□ -0.25
SGSM3-209ENST00000478085 TSG101Q99816 390 aa13.49□□□□□ -0.25
SGSM3-209ENST00000478085 PYM1Q9BRP8 204 aaKnown RBP13.49□□□□□ -0.25
SGSM3-209ENST00000478085 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.49□□□□□ -0.25
SGSM3-209ENST00000478085 RGS12O14924 1447 aa13.48□□□□□ -0.25
SGSM3-209ENST00000478085 C3P01024 1663 aa13.48□□□□□ -0.25
SGSM3-209ENST00000478085 UBR1Q8IWV7 1749 aa13.48□□□□□ -0.25
SGSM3-209ENST00000478085 TXKP42681 527 aa13.48□□□□□ -0.25
SGSM3-209ENST00000478085 RFX5P48382 616 aaPredicted RBP13.48□□□□□ -0.25
SGSM3-209ENST00000478085 SP4Q02446 784 aa13.48□□□□□ -0.25
SGSM3-209ENST00000478085 LUZP1Q86V48 1076 aa13.48□□□□□ -0.25
SGSM3-209ENST00000478085 SEPT11Q9NVA2 429 aaKnown RBP13.48□□□□□ -0.25
SGSM3-209ENST00000478085 ERMNQ8TAM6 284 aa13.48□□□□□ -0.25
SGSM3-209ENST00000478085 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.48□□□□□ -0.25
SGSM3-209ENST00000478085 TRIM47Q96LD4 638 aa13.48□□□□□ -0.25
SGSM3-209ENST00000478085 PICK1Q9NRD5 415 aa13.48□□□□□ -0.25
SGSM3-209ENST00000478085 EXOC1Q9NV70 894 aa13.48□□□□□ -0.25
SGSM3-209ENST00000478085 POLR2DO15514 142 aaKnown RBP13.48□□□□□ -0.25
SGSM3-209ENST00000478085 CAVIN2O95810 425 aa13.48□□□□□ -0.25
SGSM3-209ENST00000478085 TTC38Q5R3I4 469 aa13.48□□□□□ -0.25
SGSM3-209ENST00000478085 PRR5LQ6MZQ0 368 aa13.48□□□□□ -0.25
SGSM3-209ENST00000478085 IQUBQ8NA54 791 aa13.48□□□□□ -0.25
SGSM3-209ENST00000478085 STAMQ92783 540 aa13.48□□□□□ -0.25
SGSM3-209ENST00000478085 KCNH3Q9ULD8 1083 aa13.48□□□□□ -0.25
SGSM3-209ENST00000478085 MED23Q9ULK4 1368 aa13.48□□□□□ -0.25
SGSM3-209ENST00000478085 N4BP3O15049 544 aa13.47□□□□□ -0.25
SGSM3-209ENST00000478085 FBXO18Q8NFZ0 1043 aa13.47□□□□□ -0.25
SGSM3-209ENST00000478085 PLA2G12BQ9BX93 195 aa13.47□□□□□ -0.25
SGSM3-209ENST00000478085 CCNT1O60563 726 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms