RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 CBX8Q9HC52 389 aa4.57□□□□□ -1.68
CACUL1-202ENST00000477583 FAM53CQ9NYF3 392 aa4.57□□□□□ -1.68
CACUL1-202ENST00000477583 AKAP2Q9Y2D5 859 aa4.57□□□□□ -1.68
CACUL1-202ENST00000477583 IGF2BP3O00425 579 aaKnown RBP eCLIP4.56□□□□□ -1.68
CACUL1-202ENST00000477583 MESP2Q0VG99 397 aa4.56□□□□□ -1.68
CACUL1-202ENST00000477583 MLANAQ16655 118 aa4.56□□□□□ -1.68
CACUL1-202ENST00000477583 PPM1JQ5JR12 505 aa4.56□□□□□ -1.68
CACUL1-202ENST00000477583 BHLHE22Q8NFJ8 381 aaPredicted RBP4.56□□□□□ -1.68
CACUL1-202ENST00000477583 PRDM10Q9NQV6 1147 aa4.56□□□□□ -1.68
CACUL1-202ENST00000477583 PICK1Q9NRD5 415 aa4.56□□□□□ -1.68
CACUL1-202ENST00000477583 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.56□□□□□ -1.68
CACUL1-202ENST00000477583 GNAT3A8MTJ3 354 aa4.55□□□□□ -1.68
CACUL1-202ENST00000477583 CLCN7P51798 805 aa4.55□□□□□ -1.68
CACUL1-202ENST00000477583 ZNF252P-AS1Q0IIN9 211 aa4.55□□□□□ -1.68
CACUL1-202ENST00000477583 FAM214BQ7L5A3 538 aa4.55□□□□□ -1.68
CACUL1-202ENST00000477583 TMC7Q7Z402 723 aa4.55□□□□□ -1.68
CACUL1-202ENST00000477583 CSADQ9Y600 493 aa4.55□□□□□ -1.68
CACUL1-202ENST00000477583 ZNF503-AS2A6NEH8 195 aa4.54□□□□□ -1.68
CACUL1-202ENST00000477583 DCDC2CA8MYV0 355 aa4.54□□□□□ -1.68
CACUL1-202ENST00000477583 NTF4P34130 210 aa4.54□□□□□ -1.68
CACUL1-202ENST00000477583 NKPD1Q17RQ9 610 aa4.54□□□□□ -1.68
CACUL1-202ENST00000477583 KRTAP19-4Q3LI73 84 aa4.54□□□□□ -1.68
CACUL1-202ENST00000477583 NXPE4Q6UWF7 544 aa4.54□□□□□ -1.68
CACUL1-202ENST00000477583 DNAJC14Q6Y2X3 702 aaPredicted RBP4.54□□□□□ -1.68
CACUL1-202ENST00000477583 ZSCAN29Q8IWY8 852 aaPredicted RBP4.54□□□□□ -1.68
CACUL1-202ENST00000477583 TOX2Q96NM4 488 aa4.54□□□□□ -1.68
CACUL1-202ENST00000477583 ASB16Q96NS5 453 aa4.54□□□□□ -1.68
CACUL1-202ENST00000477583 PPP1R16BQ96T49 567 aa4.54□□□□□ -1.68
CACUL1-202ENST00000477583 PRDM5Q9NQX1 630 aaPredicted RBP4.54□□□□□ -1.68
CACUL1-202ENST00000477583 CTNND2Q9UQB3 1225 aa4.54□□□□□ -1.68
CACUL1-202ENST00000477583 SAMM50Q9Y512 469 aa4.54□□□□□ -1.68
CACUL1-202ENST00000477583 PITPNM2Q9BZ72 1349 aa4.53□□□□□ -1.68
CACUL1-202ENST00000477583 PNMA6FA0A0J9YX94 578 aa4.53□□□□□ -1.68
CACUL1-202ENST00000477583 ANKRD33BA6NCL7 494 aa4.53□□□□□ -1.68
CACUL1-202ENST00000477583 AFMP43652 599 aa4.53□□□□□ -1.68
CACUL1-202ENST00000477583 RAP1GAPP47736 663 aa4.53□□□□□ -1.68
CACUL1-202ENST00000477583 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.53□□□□□ -1.68
CACUL1-202ENST00000477583 ZBTB37Q5TC79 503 aa4.53□□□□□ -1.68
CACUL1-202ENST00000477583 MPRIPQ6WCQ1 1025 aa4.53□□□□□ -1.68
CACUL1-202ENST00000477583 TPTE2Q6XPS3 522 aa4.53□□□□□ -1.68
CACUL1-202ENST00000477583 CDC37L1Q7L3B6 337 aa4.53□□□□□ -1.68
CACUL1-202ENST00000477583 UBE3DQ7Z6J8 389 aa4.53□□□□□ -1.68
CACUL1-202ENST00000477583 KCT2Q8NC54 265 aa4.53□□□□□ -1.68
CACUL1-202ENST00000477583 LIN37Q96GY3 246 aaPredicted RBP4.53□□□□□ -1.68
CACUL1-202ENST00000477583 NECAB3Q96P71 396 aaPredicted RBP4.53□□□□□ -1.68
CACUL1-202ENST00000477583 FOXQ1Q9C009 403 aa4.53□□□□□ -1.68
CACUL1-202ENST00000477583 CACNA2D2Q9NY47 1150 aa4.53□□□□□ -1.68
CACUL1-202ENST00000477583 MAPK8IP1Q9UQF2 711 aa4.53□□□□□ -1.68
CACUL1-202ENST00000477583 CCDC9Q9Y3X0 531 aaKnown RBP4.53□□□□□ -1.68
CACUL1-202ENST00000477583 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.52□□□□□ -1.69
CACUL1-202ENST00000477583 FANCGO15287 622 aa4.52□□□□□ -1.69
CACUL1-202ENST00000477583 TRIM37O94972 964 aa4.52□□□□□ -1.69
CACUL1-202ENST00000477583 TSPAN15O95858 294 aa4.52□□□□□ -1.69
CACUL1-202ENST00000477583 LLGL2Q6P1M3 1020 aa4.52□□□□□ -1.69
CACUL1-202ENST00000477583 MPZL3Q6UWV2 235 aa4.52□□□□□ -1.69
CACUL1-202ENST00000477583 ARMCX6Q7L4S7 300 aa4.52□□□□□ -1.69
CACUL1-202ENST00000477583 C12orf40Q86WS4 652 aa4.52□□□□□ -1.69
CACUL1-202ENST00000477583 GRIN3AQ8TCU5 1115 aa4.52□□□□□ -1.69
CACUL1-202ENST00000477583 ELMO3Q96BJ8 720 aa4.52□□□□□ -1.69
CACUL1-202ENST00000477583 KIRREL1Q96J84 757 aa4.52□□□□□ -1.69
CACUL1-202ENST00000477583 CEP44Q9C0F1 390 aa4.52□□□□□ -1.69
CACUL1-202ENST00000477583 CARS2Q9HA77 564 aaKnown RBP4.52□□□□□ -1.69
CACUL1-202ENST00000477583 ENC1O14682 589 aa4.51□□□□□ -1.69
CACUL1-202ENST00000477583 TREHO43280 583 aa4.51□□□□□ -1.69
CACUL1-202ENST00000477583 EOMESO95936 686 aa4.51□□□□□ -1.69
CACUL1-202ENST00000477583 GLI1P08151 1106 aa4.51□□□□□ -1.69
CACUL1-202ENST00000477583 GSTT1P30711 240 aa4.51□□□□□ -1.69
CACUL1-202ENST00000477583 RING1Q06587 406 aa4.51□□□□□ -1.69
CACUL1-202ENST00000477583 DSC3Q14574 896 aa4.51□□□□□ -1.69
CACUL1-202ENST00000477583 FYB2Q5VWT5 728 aa4.51□□□□□ -1.69
CACUL1-202ENST00000477583 SYDE1Q6ZW31 735 aaPredicted RBP4.51□□□□□ -1.69
CACUL1-202ENST00000477583 CILP2Q8IUL8 1156 aa4.51□□□□□ -1.69
CACUL1-202ENST00000477583 NPAS4Q8IUM7 802 aa4.51□□□□□ -1.69
CACUL1-202ENST00000477583 C3orf58Q8NDZ4 430 aa4.51□□□□□ -1.69
CACUL1-202ENST00000477583 ZSCAN18Q8TBC5 510 aaPredicted RBP4.51□□□□□ -1.69
CACUL1-202ENST00000477583 LMCD1Q9NZU5 365 aa4.51□□□□□ -1.69
CACUL1-202ENST00000477583 PCDHA4Q9UN74 947 aa4.51□□□□□ -1.69
CACUL1-202ENST00000477583 FAM155AB1AL88 458 aaPredicted RBP4.5□□□□□ -1.69
CACUL1-202ENST00000477583 FBXO24O75426 580 aa4.5□□□□□ -1.69
CACUL1-202ENST00000477583 PAGE1O75459 146 aa4.5□□□□□ -1.69
CACUL1-202ENST00000477583 LRIG2O94898 1065 aa4.5□□□□□ -1.69
CACUL1-202ENST00000477583 P4HBP07237 508 aaKnown RBP4.5□□□□□ -1.69
CACUL1-202ENST00000477583 BMP6P22004 513 aa4.5□□□□□ -1.69
CACUL1-202ENST00000477583 CFPP27918 469 aa4.5□□□□□ -1.69
CACUL1-202ENST00000477583 PLCB3Q01970 1234 aa4.5□□□□□ -1.69
CACUL1-202ENST00000477583 FMR1Q06787 632 aaKnown RBP eCLIP4.5□□□□□ -1.69
CACUL1-202ENST00000477583 LRRC14Q15048 493 aa4.5□□□□□ -1.69
CACUL1-202ENST00000477583 ENOX2Q16206 610 aaKnown RBP4.5□□□□□ -1.69
CACUL1-202ENST00000477583 PRR23BQ6ZRT6 265 aa4.5□□□□□ -1.69
CACUL1-202ENST00000477583 CYFIP1Q7L576 1253 aa4.5□□□□□ -1.69
CACUL1-202ENST00000477583 LRRC56Q8IYG6 542 aaPredicted RBP4.5□□□□□ -1.69
CACUL1-202ENST00000477583 MFSD4AQ8N468 514 aa4.5□□□□□ -1.69
CACUL1-202ENST00000477583 RGS22Q8NE09 1264 aa4.5□□□□□ -1.69
CACUL1-202ENST00000477583 ZNF507Q8TCN5 953 aa4.5□□□□□ -1.69
CACUL1-202ENST00000477583 ATP13A1Q9HD20 1204 aa4.5□□□□□ -1.69
CACUL1-202ENST00000477583 PPM1HQ9ULR3 514 aa4.5□□□□□ -1.69
CACUL1-202ENST00000477583 TPX2Q9ULW0 747 aaKnown RBP4.5□□□□□ -1.69
CACUL1-202ENST00000477583 PRAMEF27A3QJZ7 478 aa4.49□□□□□ -1.69
CACUL1-202ENST00000477583 ERCC3P19447 782 aa4.49□□□□□ -1.69
CACUL1-202ENST00000477583 MAPK8P45983 427 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms