RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 F6X3S4 739 aa8.26□□□□□ -1.09
LTN1-204ENST00000475344 TAL1P17542 331 aaPredicted RBP8.26□□□□□ -1.09
LTN1-204ENST00000475344 RING1Q06587 406 aa8.26□□□□□ -1.09
LTN1-204ENST00000475344 BNIP3Q12983 259 aa8.26□□□□□ -1.09
LTN1-204ENST00000475344 ZNF574Q6ZN55 896 aaPredicted RBP8.26□□□□□ -1.09
LTN1-204ENST00000475344 TMC4Q7Z404 712 aa8.26□□□□□ -1.09
LTN1-204ENST00000475344 KCT2Q8NC54 265 aa8.26□□□□□ -1.09
LTN1-204ENST00000475344 ZNF507Q8TCN5 953 aa8.26□□□□□ -1.09
LTN1-204ENST00000475344 MIR1-1HGQ9H1L0 117 aa8.26□□□□□ -1.09
LTN1-204ENST00000475344 SLC5A6Q9Y289 635 aa8.26□□□□□ -1.09
LTN1-204ENST00000475344 TLR6Q9Y2C9 796 aa8.26□□□□□ -1.09
LTN1-204ENST00000475344 SORBS3O60504 671 aa8.25□□□□□ -1.09
LTN1-204ENST00000475344 RPS26P62854 115 aaKnown RBP8.25□□□□□ -1.09
LTN1-204ENST00000475344 NFXL1Q6ZNB6 911 aa8.25□□□□□ -1.09
LTN1-204ENST00000475344 ARMCX6Q7L4S7 300 aa8.25□□□□□ -1.09
LTN1-204ENST00000475344 JARID2Q92833 1246 aaPredicted RBP8.25□□□□□ -1.09
LTN1-204ENST00000475344 FBRSQ9HAH7 460 aa8.25□□□□□ -1.09
LTN1-204ENST00000475344 PRDM10Q9NQV6 1147 aa8.25□□□□□ -1.09
LTN1-204ENST00000475344 CEACAM5P06731 702 aa8.24□□□□□ -1.09
LTN1-204ENST00000475344 CTSHP09668 335 aa8.24□□□□□ -1.09
LTN1-204ENST00000475344 AGMOQ6ZNB7 445 aa8.24□□□□□ -1.09
LTN1-204ENST00000475344 CYFIP1Q7L576 1253 aa8.24□□□□□ -1.09
LTN1-204ENST00000475344 BCL7CQ8WUZ0 217 aaPredicted RBP8.24□□□□□ -1.09
LTN1-204ENST00000475344 SNCAIPQ9Y6H5 919 aa8.24□□□□□ -1.09
LTN1-204ENST00000475344 TFE3P19532 575 aaPredicted RBP8.23□□□□□ -1.09
LTN1-204ENST00000475344 GRK4P32298 578 aa8.23□□□□□ -1.09
LTN1-204ENST00000475344 IFI16Q16666 785 aaKnown RBP8.23□□□□□ -1.09
LTN1-204ENST00000475344 STK11IPQ8N1F8 1099 aa8.23□□□□□ -1.09
LTN1-204ENST00000475344 AGBL5Q8NDL9 886 aa8.23□□□□□ -1.09
LTN1-204ENST00000475344 XAGE3Q8WTP9 111 aa8.23□□□□□ -1.09
LTN1-204ENST00000475344 HEXIM2Q96MH2 286 aaKnown RBP8.23□□□□□ -1.09
LTN1-204ENST00000475344 WNT10AQ9GZT5 417 aa8.23□□□□□ -1.09
LTN1-204ENST00000475344 PAK6Q9NQU5 681 aaPredicted RBP8.23□□□□□ -1.09
LTN1-204ENST00000475344 GTF2IRD1Q9UHL9 959 aa8.23□□□□□ -1.09
LTN1-204ENST00000475344 ADGRE2Q9UHX3 823 aa8.23□□□□□ -1.09
LTN1-204ENST00000475344 COL17A1Q9UMD9 1497 aaPredicted RBP8.22□□□□□ -1.09
LTN1-204ENST00000475344 ERCC3P19447 782 aa8.22□□□□□ -1.09
LTN1-204ENST00000475344 CD96P40200 585 aa8.22□□□□□ -1.09
LTN1-204ENST00000475344 OXCT1P55809 520 aa8.22□□□□□ -1.09
LTN1-204ENST00000475344 PLCL1Q15111 1095 aa8.22□□□□□ -1.09
LTN1-204ENST00000475344 NKG7Q16617 165 aa8.22□□□□□ -1.09
LTN1-204ENST00000475344 CRELD1Q96HD1 420 aa8.22□□□□□ -1.09
LTN1-204ENST00000475344 MIPEPQ99797 713 aa8.22□□□□□ -1.09
LTN1-204ENST00000475344 LRIG2O94898 1065 aa8.21□□□□□ -1.1
LTN1-204ENST00000475344 RLBP1P12271 317 aa8.21□□□□□ -1.1
LTN1-204ENST00000475344 ST13P50502 369 aaKnown RBP8.21□□□□□ -1.1
LTN1-204ENST00000475344 AOC3Q16853 763 aa8.21□□□□□ -1.1
LTN1-204ENST00000475344 SPRED2Q7Z698 418 aa8.21□□□□□ -1.1
LTN1-204ENST00000475344 MISP3Q96FF7 219 aa8.21□□□□□ -1.1
LTN1-204ENST00000475344 BCL2L13Q9BXK5 485 aa8.21□□□□□ -1.1
LTN1-204ENST00000475344 KRTAP4-8Q9BYQ9 185 aa8.21□□□□□ -1.1
LTN1-204ENST00000475344 FOXQ1Q9C009 403 aa8.21□□□□□ -1.1
LTN1-204ENST00000475344 TPX2Q9ULW0 747 aaKnown RBP8.21□□□□□ -1.1
LTN1-204ENST00000475344 USP31Q70CQ4 1352 aa8.21□□□□□ -1.1
LTN1-204ENST00000475344 GNAT3A8MTJ3 354 aa8.2□□□□□ -1.1
LTN1-204ENST00000475344 HID1Q8IV36 788 aa8.2□□□□□ -1.1
LTN1-204ENST00000475344 HRASLS5Q96KN8 279 aa8.2□□□□□ -1.1
LTN1-204ENST00000475344 NOC4LQ9BVI4 516 aaKnown RBP8.2□□□□□ -1.1
LTN1-204ENST00000475344 MKNK2Q9HBH9 465 aa8.2□□□□□ -1.1
LTN1-204ENST00000475344 PRDM5Q9NQX1 630 aaPredicted RBP8.2□□□□□ -1.1
LTN1-204ENST00000475344 PLAGL2Q9UPG8 496 aa8.2□□□□□ -1.1
LTN1-204ENST00000475344 TMEM265A0A087WTH1 108 aa8.19□□□□□ -1.1
LTN1-204ENST00000475344 EOMESO95936 686 aa8.19□□□□□ -1.1
LTN1-204ENST00000475344 PGRP06401 933 aa8.19□□□□□ -1.1
LTN1-204ENST00000475344 CD8BP10966 210 aa8.19□□□□□ -1.1
LTN1-204ENST00000475344 SLBPQ14493 270 aaKnown RBP eCLIP8.19□□□□□ -1.1
LTN1-204ENST00000475344 TSNAXIP1Q2TAA8 658 aa8.19□□□□□ -1.1
LTN1-204ENST00000475344 DIEXFQ68CQ4 756 aaKnown RBP8.19□□□□□ -1.1
LTN1-204ENST00000475344 PHC3Q8NDX5 983 aa8.19□□□□□ -1.1
LTN1-204ENST00000475344 DPH2Q9BQC3 489 aaPredicted RBP8.19□□□□□ -1.1
LTN1-204ENST00000475344 GFRA2O00451 464 aa8.18□□□□□ -1.1
LTN1-204ENST00000475344 PAX4O43316 350 aa8.18□□□□□ -1.1
LTN1-204ENST00000475344 SLITRK5O94991 958 aa8.18□□□□□ -1.1
LTN1-204ENST00000475344 GBP2P32456 591 aaPredicted RBP8.18□□□□□ -1.1
LTN1-204ENST00000475344 PRKCQQ04759 706 aa8.18□□□□□ -1.1
LTN1-204ENST00000475344 PRAMEF13Q5VWM6 474 aa8.18□□□□□ -1.1
LTN1-204ENST00000475344 GIPC2Q8TF65 315 aa8.18□□□□□ -1.1
LTN1-204ENST00000475344 VAV3Q9UKW4 847 aa8.18□□□□□ -1.1
LTN1-204ENST00000475344 ZBTB7CA1YPR0 619 aa8.17□□□□□ -1.1
LTN1-204ENST00000475344 ITGAEP38570 1179 aa8.17□□□□□ -1.1
LTN1-204ENST00000475344 RPL6Q02878 288 aaKnown RBP8.17□□□□□ -1.1
LTN1-204ENST00000475344 FAM214BQ7L5A3 538 aa8.17□□□□□ -1.1
LTN1-204ENST00000475344 WFDC3Q8IUB2 231 aa8.17□□□□□ -1.1
LTN1-204ENST00000475344 RELL1Q8IUW5 271 aa8.17□□□□□ -1.1
LTN1-204ENST00000475344 MFSD2AQ8NA29 543 aa8.17□□□□□ -1.1
LTN1-204ENST00000475344 MINDY4BA8MYZ0 360 aa8.16□□□□□ -1.1
LTN1-204ENST00000475344 IGF2BP3O00425 579 aaKnown RBP eCLIP8.16□□□□□ -1.1
LTN1-204ENST00000475344 BPNT1O95861 308 aa8.16□□□□□ -1.1
LTN1-204ENST00000475344 PF4P02776 101 aa8.16□□□□□ -1.1
LTN1-204ENST00000475344 FAM160A1Q05DH4 1040 aa8.16□□□□□ -1.1
LTN1-204ENST00000475344 PDE4BQ07343 736 aa8.16□□□□□ -1.1
LTN1-204ENST00000475344 CAMK2GQ13555 558 aaPredicted RBP8.16□□□□□ -1.1
LTN1-204ENST00000475344 ZNF326Q5BKZ1 582 aaKnown RBP8.16□□□□□ -1.1
LTN1-204ENST00000475344 LETMD1Q6P1Q0 360 aa8.16□□□□□ -1.1
LTN1-204ENST00000475344 BNC2Q6ZN30 1099 aaPredicted RBP8.16□□□□□ -1.1
LTN1-204ENST00000475344 RIN3Q8TB24 985 aa8.16□□□□□ -1.1
LTN1-204ENST00000475344 FAM155AB1AL88 458 aaPredicted RBP8.15□□□□□ -1.1
LTN1-204ENST00000475344 ZNF792Q3KQV3 632 aa8.15□□□□□ -1.1
LTN1-204ENST00000475344 SFRP5Q5T4F7 317 aa8.15□□□□□ -1.1
LTN1-204ENST00000475344 CDH24Q86UP0 819 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms