RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 LZTS2Q9BRK4 669 aa7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 MMTAG2Q9BU76 263 aaKnown RBP7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 OSBPL2Q9H1P3 480 aa7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 SLKQ9H2G2 1235 aaPredicted RBP7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 IRAK4Q9NWZ3 460 aa7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 POLKQ9UBT6 870 aa7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 FOXD3Q9UJU5 478 aaPredicted RBP7.01□□□□□ -1.29
ECHDC1-215ENST00000475319 ERICH4A6NGS2 130 aa7□□□□□ -1.29
ECHDC1-215ENST00000475319 TMCO5BA8MYB1 307 aa7□□□□□ -1.29
ECHDC1-215ENST00000475319 TPM1P09493 284 aa7□□□□□ -1.29
ECHDC1-215ENST00000475319 SKILP12757 684 aa7□□□□□ -1.29
ECHDC1-215ENST00000475319 ATF4P18848 351 aaPredicted RBP7□□□□□ -1.29
ECHDC1-215ENST00000475319 MAGEA9P43362 315 aa7□□□□□ -1.29
ECHDC1-215ENST00000475319 PAK2Q13177 524 aa7□□□□□ -1.29
ECHDC1-215ENST00000475319 CBLBQ13191 982 aa7□□□□□ -1.29
ECHDC1-215ENST00000475319 BMS1Q14692 1282 aaKnown RBP7□□□□□ -1.29
ECHDC1-215ENST00000475319 TAF1CQ15572 869 aaPredicted RBP7□□□□□ -1.29
ECHDC1-215ENST00000475319 LONRF3Q496Y0 759 aa7□□□□□ -1.29
ECHDC1-215ENST00000475319 TEX35Q5T0J7 233 aa7□□□□□ -1.29
ECHDC1-215ENST00000475319 EGFLAMQ63HQ2 1017 aa7□□□□□ -1.29
ECHDC1-215ENST00000475319 KLHL10Q6JEL2 608 aa7□□□□□ -1.29
ECHDC1-215ENST00000475319 TRIM74Q86UV6 250 aa7□□□□□ -1.29
ECHDC1-215ENST00000475319 TRIM73Q86UV7 250 aa7□□□□□ -1.29
ECHDC1-215ENST00000475319 GBP4Q96PP9 640 aa7□□□□□ -1.29
ECHDC1-215ENST00000475319 ARPC5LQ9BPX5 153 aa7□□□□□ -1.29
ECHDC1-215ENST00000475319 IQCGQ9H095 443 aaKnown RBP7□□□□□ -1.29
ECHDC1-215ENST00000475319 TMX1Q9H3N1 280 aa7□□□□□ -1.29
ECHDC1-215ENST00000475319 RRAGCQ9HB90 399 aa7□□□□□ -1.29
ECHDC1-215ENST00000475319 CPSF2Q9P2I0 782 aaKnown RBP7□□□□□ -1.29
ECHDC1-215ENST00000475319 DHX29Q7Z478 1369 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-215ENST00000475319 EPRSP07814 1512 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-215ENST00000475319 UGGT2Q9NYU1 1516 aa6.99□□□□□ -1.29
ECHDC1-215ENST00000475319 KDM5BQ9UGL1 1544 aa6.99□□□□□ -1.29
ECHDC1-215ENST00000475319 MEN1O00255 615 aa6.99□□□□□ -1.29
ECHDC1-215ENST00000475319 EXOC5O00471 708 aa6.99□□□□□ -1.29
ECHDC1-215ENST00000475319 EPB41L2O43491 1005 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-215ENST00000475319 TNFRSF21O75509 655 aa6.99□□□□□ -1.29
ECHDC1-215ENST00000475319 MICAL2O94851 1124 aa6.99□□□□□ -1.29
ECHDC1-215ENST00000475319 RPLP1P05386 114 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-215ENST00000475319 FAM200BP0CF97 657 aa6.99□□□□□ -1.29
ECHDC1-215ENST00000475319 IMPDH2P12268 514 aa6.99□□□□□ -1.29
ECHDC1-215ENST00000475319 INHBEP58166 350 aa6.99□□□□□ -1.29
ECHDC1-215ENST00000475319 FZD5Q13467 585 aa6.99□□□□□ -1.29
ECHDC1-215ENST00000475319 C1orf53Q5VUE5 145 aa6.99□□□□□ -1.29
ECHDC1-215ENST00000475319 MMS22LQ6ZRQ5 1243 aa6.99□□□□□ -1.29
ECHDC1-215ENST00000475319 PPM1EQ8WY54 764 aa6.99□□□□□ -1.29
ECHDC1-215ENST00000475319 SYAP1Q96A49 352 aaPredicted RBP6.99□□□□□ -1.29
ECHDC1-215ENST00000475319 KIF2CQ99661 725 aa6.99□□□□□ -1.29
ECHDC1-215ENST00000475319 NIFKQ9BYG3 293 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-215ENST00000475319 FAM53CQ9NYF3 392 aa6.99□□□□□ -1.29
ECHDC1-215ENST00000475319 UTP6Q9NYH9 597 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-215ENST00000475319 ADGRL1O94910 1474 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 WDR7Q9Y4E6 1490 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 GIPC1O14908 333 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 CDKL5O76039 1030 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 SMC2O95347 1197 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 USP17L7P0C7H9 530 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 PAX3P23760 479 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 RRP1P56182 461 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 RHBDL3P58872 404 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 GPS2Q13227 327 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 LAMC2Q13753 1193 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 RASA3Q14644 834 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 RBBP5Q15291 538 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 FILIP1LQ4L180 1135 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 ZNF746Q6NUN9 644 aaPredicted RBP6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 SRLQ86TD4 932 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 JAZF1Q86VZ6 243 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 RPUSD2Q8IZ73 545 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 PIBF1Q8WXW3 757 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 CFAP53Q96M91 514 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 NLRP3Q96P20 1036 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 AGAP3Q96P47 875 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 ZSCAN10Q96SZ4 725 aaPredicted RBP6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 COPRSQ9NQ92 184 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 ATG3Q9NT62 314 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 FAM8A1Q9UBU6 413 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 CD109Q6YHK3 1445 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 PLEKHG2Q9H7P9 1386 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 SPAG9O60271 1321 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 RPGRIP1LQ68CZ1 1315 aa6.98□□□□□ -1.29
ECHDC1-215ENST00000475319 SGSM2O43147 1006 aa6.97□□□□□ -1.29
ECHDC1-215ENST00000475319 CPP00450 1065 aa6.97□□□□□ -1.29
ECHDC1-215ENST00000475319 ST13P50502 369 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-215ENST00000475319 ZNF445P59923 1031 aa6.97□□□□□ -1.29
ECHDC1-215ENST00000475319 TMED1Q13445 227 aa6.97□□□□□ -1.29
ECHDC1-215ENST00000475319 GJC2Q5T442 439 aaPredicted RBP6.97□□□□□ -1.29
ECHDC1-215ENST00000475319 TMEM214Q6NUQ4 689 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-215ENST00000475319 ERMP1Q7Z2K6 904 aa6.97□□□□□ -1.29
ECHDC1-215ENST00000475319 RBM12BQ8IXT5 1001 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-215ENST00000475319 C10orf67Q8IYJ2 551 aa6.97□□□□□ -1.29
ECHDC1-215ENST00000475319 KIF18AQ8NI77 898 aa6.97□□□□□ -1.29
ECHDC1-215ENST00000475319 CCDC26Q8TAB7 109 aa6.97□□□□□ -1.29
ECHDC1-215ENST00000475319 C17orf50Q8WW18 174 aa6.97□□□□□ -1.29
ECHDC1-215ENST00000475319 GPRASP2Q96D09 838 aa6.97□□□□□ -1.29
ECHDC1-215ENST00000475319 KLRG1Q96E93 195 aa6.97□□□□□ -1.29
ECHDC1-215ENST00000475319 AGBL1Q96MI9 1066 aa6.97□□□□□ -1.29
ECHDC1-215ENST00000475319 RMI1Q9H9A7 625 aa6.97□□□□□ -1.29
ECHDC1-215ENST00000475319 USP20Q9Y2K6 914 aa6.97□□□□□ -1.29
ECHDC1-215ENST00000475319 V9GYY5 206 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms