RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 DONSONQ9NYP3 566 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 LRFN2Q9ULH4 789 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 CPDO75976 1380 aa5.22□□□□□ -1.57
CCNL1-215ENST00000474539 GCFC2P16383 781 aaKnown RBP5.21□□□□□ -1.57
CCNL1-215ENST00000474539 ATP5JP18859 108 aa5.21□□□□□ -1.57
CCNL1-215ENST00000474539 CTNNA2P26232 953 aa5.21□□□□□ -1.57
CCNL1-215ENST00000474539 HSPA1LP34931 641 aa5.21□□□□□ -1.57
CCNL1-215ENST00000474539 STAT6P42226 847 aa5.21□□□□□ -1.57
CCNL1-215ENST00000474539 MRE11P49959 708 aa5.21□□□□□ -1.57
CCNL1-215ENST00000474539 GTF2IP78347 998 aa5.21□□□□□ -1.57
CCNL1-215ENST00000474539 KYAT1Q16773 422 aa5.21□□□□□ -1.57
CCNL1-215ENST00000474539 DTHD1Q6ZMT9 781 aa5.21□□□□□ -1.57
CCNL1-215ENST00000474539 MTERF4Q7Z6M4 381 aaKnown RBP5.21□□□□□ -1.57
CCNL1-215ENST00000474539 KBTBD3Q8NAB2 608 aa5.21□□□□□ -1.57
CCNL1-215ENST00000474539 CSRNP2Q9H175 543 aa5.21□□□□□ -1.57
CCNL1-215ENST00000474539 ZFYVE28Q9HCC9 887 aa5.21□□□□□ -1.57
CCNL1-215ENST00000474539 FOXD4L1Q9NU39 408 aa5.21□□□□□ -1.57
CCNL1-215ENST00000474539 PI4KBQ9UBF8 816 aa5.21□□□□□ -1.57
CCNL1-215ENST00000474539 PATL2C9JE40 543 aaKnown RBP5.21□□□□□ -1.58
CCNL1-215ENST00000474539 POTEB2H3BUK9 544 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 MMP10P09238 476 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 MTIF2P46199 727 aaKnown RBP5.21□□□□□ -1.58
CCNL1-215ENST00000474539 STK3Q13188 491 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 ABCB5Q2M3G0 1257 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 SPOUT1Q5T280 376 aaKnown RBP5.21□□□□□ -1.58
CCNL1-215ENST00000474539 UTP14CQ5TAP6 766 aaKnown RBP5.21□□□□□ -1.58
CCNL1-215ENST00000474539 USP17L2Q6R6M4 530 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 ATP6V0A1Q93050 837 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 ALG1Q9BT22 464 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 MLXIPQ9HAP2 919 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 VAT1LQ9HCJ6 419 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 CGNQ9P2M7 1197 aaKnown RBP5.21□□□□□ -1.58
CCNL1-215ENST00000474539 FRMD4BQ9Y2L6 1034 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 SSH2Q76I76 1423 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 SPHKAPQ2M3C7 1700 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 CDC42BPAQ5VT25 1732 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 ARHGEF35A5YM69 484 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 ZNF233A6NK53 670 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 NEURL1BA8MQ27 555 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 MBD4O95243 580 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 PDE4CQ08493 712 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 ALCAMQ13740 583 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 SMC1AQ14683 1233 aaKnown RBP5.21□□□□□ -1.58
CCNL1-215ENST00000474539 NONOQ15233 471 aaKnown RBP eCLIP5.21□□□□□ -1.58
CCNL1-215ENST00000474539 KIAA1328Q86T90 577 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 ABI1Q8IZP0 508 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 SAMD3Q8N6K7 520 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 FNBP1Q96RU3 617 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 PARK7Q99497 189 aaKnown RBP5.21□□□□□ -1.58
CCNL1-215ENST00000474539 CD163L1Q9NR16 1453 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 SPATA31A1Q5TZJ5 1347 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 SPATA31A5Q5VU36 1347 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 SPATA31A7Q8IWB4 1347 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 CLTCQ00610 1675 aaKnown RBP5.21□□□□□ -1.58
CCNL1-215ENST00000474539 GOLGA6L10A0A0M3HER8 536 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 GOLGA6L7A0A1B0GV03 622 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 SHTN1A0MZ66 631 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 TYW5A2RUC4 315 aaKnown RBP5.21□□□□□ -1.58
CCNL1-215ENST00000474539 LAD1O00515 517 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 FMNL1O95466 1100 aaPredicted RBP5.21□□□□□ -1.58
CCNL1-215ENST00000474539 CCDC175P0C221 793 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 MYZAPP0CAP1 466 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 NEFHP12036 1026 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 NUCB1Q02818 461 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 ORC2Q13416 577 aaPredicted RBP5.21□□□□□ -1.58
CCNL1-215ENST00000474539 MAP9Q49MG5 647 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 NUDT18Q6ZVK8 323 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 ANKRD35Q8N283 1001 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 IQUBQ8NA54 791 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 BBXQ8WY36 941 aaPredicted RBP5.21□□□□□ -1.58
CCNL1-215ENST00000474539 FAM89AQ96GI7 184 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 GCNAQ96QF7 691 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 RNF181Q9P0P0 153 aa5.21□□□□□ -1.58
CCNL1-215ENST00000474539 HERC5Q9UII4 1024 aaKnown RBP5.21□□□□□ -1.58
CCNL1-215ENST00000474539 IQSEC2Q5JU85 1478 aa5.2□□□□□ -1.58
CCNL1-215ENST00000474539 COL15A1P39059 1388 aa5.2□□□□□ -1.58
CCNL1-215ENST00000474539 EIF3JO75822 258 aaKnown RBP5.2□□□□□ -1.58
CCNL1-215ENST00000474539 GNA14O95837 355 aa5.2□□□□□ -1.58
CCNL1-215ENST00000474539 FOSBP53539 338 aa5.2□□□□□ -1.58
CCNL1-215ENST00000474539 PDE1AP54750 535 aa5.2□□□□□ -1.58
CCNL1-215ENST00000474539 BRPF1P55201 1214 aaPredicted RBP5.2□□□□□ -1.58
CCNL1-215ENST00000474539 ICA1Q05084 483 aa5.2□□□□□ -1.58
CCNL1-215ENST00000474539 POSTNQ15063 836 aa5.2□□□□□ -1.58
CCNL1-215ENST00000474539 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.2□□□□□ -1.58
CCNL1-215ENST00000474539 MICU3Q86XE3 530 aa5.2□□□□□ -1.58
CCNL1-215ENST00000474539 CCAR2Q8N163 923 aaKnown RBP5.2□□□□□ -1.58
CCNL1-215ENST00000474539 MB21D1Q8N884 522 aa5.2□□□□□ -1.58
CCNL1-215ENST00000474539 JAKMIP2Q96AA8 810 aa5.2□□□□□ -1.58
CCNL1-215ENST00000474539 CCDC97Q96F63 343 aaPredicted RBP5.2□□□□□ -1.58
CCNL1-215ENST00000474539 EDEM3Q9BZQ6 932 aa5.2□□□□□ -1.58
CCNL1-215ENST00000474539 BICC1Q9H694 974 aaKnown RBP5.2□□□□□ -1.58
CCNL1-215ENST00000474539 COPRSQ9NQ92 184 aa5.2□□□□□ -1.58
CCNL1-215ENST00000474539 SPATA31D1Q6ZQQ2 1576 aa5.2□□□□□ -1.58
CCNL1-215ENST00000474539 PTPDC1A2A3K4 754 aa5.2□□□□□ -1.58
CCNL1-215ENST00000474539 ASB14A6NK59 587 aa5.2□□□□□ -1.58
CCNL1-215ENST00000474539 GOLGA8CPA6NN73 597 aa5.2□□□□□ -1.58
CCNL1-215ENST00000474539 ATP2A1O14983 1001 aa5.2□□□□□ -1.58
CCNL1-215ENST00000474539 SMARCA5O60264 1052 aaPredicted RBP5.2□□□□□ -1.58
CCNL1-215ENST00000474539 PAFAH1B1P43034 410 aa5.2□□□□□ -1.58
CCNL1-215ENST00000474539 TFCP2Q12800 502 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms