RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 USP54Q70EL1 1684 aa5.31□□□□□ -1.56
LRCH3-213ENST00000471667 LMOD1P29536 600 aaPredicted RBP5.3□□□□□ -1.56
LRCH3-213ENST00000471667 ADGRE1Q14246 886 aa5.3□□□□□ -1.56
LRCH3-213ENST00000471667 RTN1Q16799 776 aa5.3□□□□□ -1.56
LRCH3-213ENST00000471667 PRSS36Q5K4E3 855 aa5.3□□□□□ -1.56
LRCH3-213ENST00000471667 IER5Q5VY09 327 aa5.3□□□□□ -1.56
LRCH3-213ENST00000471667 PSAPL1Q6NUJ1 521 aa5.3□□□□□ -1.56
LRCH3-213ENST00000471667 GLMNQ92990 594 aa5.3□□□□□ -1.56
LRCH3-213ENST00000471667 PNMA5Q96PV4 448 aa5.3□□□□□ -1.56
LRCH3-213ENST00000471667 NAGPAQ9UK23 515 aa5.3□□□□□ -1.56
LRCH3-213ENST00000471667 MAFBQ9Y5Q3 323 aaPredicted RBP5.3□□□□□ -1.56
LRCH3-213ENST00000471667 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.3□□□□□ -1.56
LRCH3-213ENST00000471667 KIF13BQ9NQT8 1826 aa5.3□□□□□ -1.56
LRCH3-213ENST00000471667 TIAM2Q8IVF5 1701 aa5.29□□□□□ -1.56
LRCH3-213ENST00000471667 TGFBR3LH3BV60 316 aa5.29□□□□□ -1.56
LRCH3-213ENST00000471667 LGR5O75473 907 aa5.29□□□□□ -1.56
LRCH3-213ENST00000471667 NFKB1P19838 968 aa5.29□□□□□ -1.56
LRCH3-213ENST00000471667 CHRNA5P30532 468 aa5.29□□□□□ -1.56
LRCH3-213ENST00000471667 AFF1P51825 1210 aaKnown RBP5.29□□□□□ -1.56
LRCH3-213ENST00000471667 CCINQ13939 588 aa5.29□□□□□ -1.56
LRCH3-213ENST00000471667 SHISA2Q6UWI4 295 aa5.29□□□□□ -1.56
LRCH3-213ENST00000471667 TXNRD3Q86VQ6 643 aa5.29□□□□□ -1.56
LRCH3-213ENST00000471667 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.29□□□□□ -1.56
LRCH3-213ENST00000471667 LENG1Q96BZ8 264 aaPredicted RBP5.29□□□□□ -1.56
LRCH3-213ENST00000471667 PSMG3-AS1Q96PY0 264 aa5.29□□□□□ -1.56
LRCH3-213ENST00000471667 HINFPQ9BQA5 517 aa5.29□□□□□ -1.56
LRCH3-213ENST00000471667 CDK19Q9BWU1 502 aa5.29□□□□□ -1.56
LRCH3-213ENST00000471667 TAOK3Q9H2K8 898 aa5.29□□□□□ -1.56
LRCH3-213ENST00000471667 DMGDHQ9UI17 866 aaKnown RBP5.29□□□□□ -1.56
LRCH3-213ENST00000471667 CASP8AP2Q9UKL3 1982 aa5.29□□□□□ -1.56
LRCH3-213ENST00000471667 NSD2O96028 1365 aa5.29□□□□□ -1.56
LRCH3-213ENST00000471667 C4BP0C0L5 1744 aa5.28□□□□□ -1.56
LRCH3-213ENST00000471667 SLIT3O75094 1523 aa5.28□□□□□ -1.56
LRCH3-213ENST00000471667 MEGF6O75095 1541 aa5.28□□□□□ -1.56
LRCH3-213ENST00000471667 RGS9O75916 674 aaPredicted RBP5.28□□□□□ -1.56
LRCH3-213ENST00000471667 H2AFB1P0C5Y9 115 aa5.28□□□□□ -1.56
LRCH3-213ENST00000471667 H2AFB2P0C5Z0 115 aa5.28□□□□□ -1.56
LRCH3-213ENST00000471667 NRG1Q02297 640 aaPredicted RBP5.28□□□□□ -1.56
LRCH3-213ENST00000471667 PTK7Q13308 1070 aa5.28□□□□□ -1.56
LRCH3-213ENST00000471667 CRTC2Q53ET0 693 aaPredicted RBP5.28□□□□□ -1.56
LRCH3-213ENST00000471667 CFAP70Q5T0N1 1121 aa5.28□□□□□ -1.56
LRCH3-213ENST00000471667 SOGA3Q5TF21 947 aa5.28□□□□□ -1.56
LRCH3-213ENST00000471667 FBXO46Q6PJ61 603 aaPredicted RBP5.28□□□□□ -1.56
LRCH3-213ENST00000471667 MPRIPQ6WCQ1 1025 aa5.28□□□□□ -1.56
LRCH3-213ENST00000471667 DMRTC2Q8IXT2 367 aaPredicted RBP5.28□□□□□ -1.56
LRCH3-213ENST00000471667 ZCRB1Q8TBF4 217 aaKnown RBP5.28□□□□□ -1.56
LRCH3-213ENST00000471667 CLUAP1Q96AJ1 413 aa5.28□□□□□ -1.56
LRCH3-213ENST00000471667 H0YIN7 160 aa5.27□□□□□ -1.57
LRCH3-213ENST00000471667 TRPA1O75762 1119 aa5.27□□□□□ -1.57
LRCH3-213ENST00000471667 EPB42P16452 691 aa5.27□□□□□ -1.57
LRCH3-213ENST00000471667 IGFBP4P22692 258 aa5.27□□□□□ -1.57
LRCH3-213ENST00000471667 GRNP28799 593 aaKnown RBP5.27□□□□□ -1.57
LRCH3-213ENST00000471667 DPYDQ12882 1025 aa5.27□□□□□ -1.57
LRCH3-213ENST00000471667 ARTNQ5T4W7 220 aa5.27□□□□□ -1.57
LRCH3-213ENST00000471667 SAPCD2Q86UD0 394 aa5.27□□□□□ -1.57
LRCH3-213ENST00000471667 SMG6Q86US8 1419 aaKnown RBP5.27□□□□□ -1.57
LRCH3-213ENST00000471667 FAM35AQ86V20 835 aa5.27□□□□□ -1.57
LRCH3-213ENST00000471667 FMR1NBQ8N0W7 255 aaPredicted RBP5.27□□□□□ -1.57
LRCH3-213ENST00000471667 ANKRD24Q8TF21 1146 aa5.27□□□□□ -1.57
LRCH3-213ENST00000471667 KLK14Q9P0G3 267 aa5.27□□□□□ -1.57
LRCH3-213ENST00000471667 STXBP5LQ9Y2K9 1186 aa5.27□□□□□ -1.57
LRCH3-213ENST00000471667 C4AP0C0L4 1744 aa5.26□□□□□ -1.57
LRCH3-213ENST00000471667 KIAA1551Q9HCM1 1747 aa5.26□□□□□ -1.57
LRCH3-213ENST00000471667 LOC102724428A0A0B4J2F2 783 aa5.26□□□□□ -1.57
LRCH3-213ENST00000471667 NFKBIEO00221 500 aa5.26□□□□□ -1.57
LRCH3-213ENST00000471667 CELF2O95319 508 aaKnown RBP5.26□□□□□ -1.57
LRCH3-213ENST00000471667 MAP3K6O95382 1288 aa5.26□□□□□ -1.57
LRCH3-213ENST00000471667 CPB1P15086 417 aa5.26□□□□□ -1.57
LRCH3-213ENST00000471667 INPP5BP32019 993 aa5.26□□□□□ -1.57
LRCH3-213ENST00000471667 IDH3AP50213 366 aa5.26□□□□□ -1.57
LRCH3-213ENST00000471667 SIK1P57059 783 aa5.26□□□□□ -1.57
LRCH3-213ENST00000471667 PCSK7Q16549 785 aa5.26□□□□□ -1.57
LRCH3-213ENST00000471667 ZFP64Q9NPA5 681 aa5.26□□□□□ -1.57
LRCH3-213ENST00000471667 SBF1O95248 1867 aa5.26□□□□□ -1.57
LRCH3-213ENST00000471667 DOT1LQ8TEK3 1739 aa5.26□□□□□ -1.57
LRCH3-213ENST00000471667 CGNL1Q0VF96 1302 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 LTBP3Q9NS15 1303 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 SCN4AP35499 1836 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 A0A1W2PPC1 479 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 FAM196BA6NMK8 535 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 USP17L15C9J2P7 530 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 USP17L10C9JJH3 530 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 USP17L13C9JLJ4 530 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 USP17L12C9JPN9 530 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 USP17L11C9JVI0 530 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 USP17L21D6R901 530 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 USP17L18D6R9N7 530 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 USP17L22D6RA61 530 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 USP17L17D6RBQ6 530 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 USP17L19D6RCP7 530 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 USP17L20D6RJB6 530 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 GYS1P13807 737 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 USP17L24Q0WX57 530 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 PERM1Q5SV97 790 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 KRT25Q7Z3Z0 450 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 AMIGO3Q86WK7 504 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 ANKMY2Q8IV38 441 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 LINC00116Q8NCU8 138 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 TP53INP1Q96A56 240 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 LPIN3Q9BQK8 851 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms