RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 RBBP6Q7Z6E9 1792 aaKnown RBP25.54■■□□□ 1.68
SREBF1-210ENST00000471445 MYH7P12883 1935 aa25.53■■□□□ 1.68
SREBF1-210ENST00000471445 A0A0G2JLL6 359 aaPredicted RBP25.53■■□□□ 1.68
SREBF1-210ENST00000471445 SLC34A2O95436 690 aa25.53■■□□□ 1.68
SREBF1-210ENST00000471445 MLLT1Q03111 559 aaPredicted RBP25.53■■□□□ 1.68
SREBF1-210ENST00000471445 TMED8Q6PL24 325 aaPredicted RBP25.53■■□□□ 1.68
SREBF1-210ENST00000471445 PRRT2Q7Z6L0 340 aaPredicted RBP25.53■■□□□ 1.68
SREBF1-210ENST00000471445 MAPKAPK5Q8IW41 473 aa25.53■■□□□ 1.68
SREBF1-210ENST00000471445 MAGEB6Q8N7X4 407 aa25.53■■□□□ 1.68
SREBF1-210ENST00000471445 DHX36Q9H2U1 1008 aaKnown RBP25.53■■□□□ 1.68
SREBF1-210ENST00000471445 EFCC1Q9HA90 598 aa25.53■■□□□ 1.68
SREBF1-210ENST00000471445 HERC5Q9UII4 1024 aaKnown RBP25.53■■□□□ 1.68
SREBF1-210ENST00000471445 PDHXO00330 501 aa25.52■■□□□ 1.68
SREBF1-210ENST00000471445 IFIT2P09913 472 aaKnown RBP25.52■■□□□ 1.68
SREBF1-210ENST00000471445 SOX10P56693 466 aa25.52■■□□□ 1.68
SREBF1-210ENST00000471445 DYNLL1P63167 89 aaKnown RBP25.52■■□□□ 1.68
SREBF1-210ENST00000471445 MAP3K12Q12852 859 aa25.52■■□□□ 1.68
SREBF1-210ENST00000471445 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.52■■□□□ 1.68
SREBF1-210ENST00000471445 GPAT2Q6NUI2 795 aa25.51■■□□□ 1.67
SREBF1-210ENST00000471445 CERS3Q8IU89 383 aa25.51■■□□□ 1.67
SREBF1-210ENST00000471445 PI4KBQ9UBF8 816 aa25.51■■□□□ 1.67
SREBF1-210ENST00000471445 PTPN22Q9Y2R2 807 aa25.51■■□□□ 1.67
SREBF1-210ENST00000471445 MGAMO43451 1857 aa25.51■■□□□ 1.67
SREBF1-210ENST00000471445 TTF1Q15361 905 aaPredicted RBP25.5■■□□□ 1.67
SREBF1-210ENST00000471445 DNAJC18Q9H819 358 aa25.5■■□□□ 1.67
SREBF1-210ENST00000471445 RRP1BQ14684 758 aaKnown RBP25.49■■□□□ 1.67
SREBF1-210ENST00000471445 C17orf99Q6UX52 265 aa25.49■■□□□ 1.67
SREBF1-210ENST00000471445 CCDC84Q86UT8 332 aaPredicted RBP25.49■■□□□ 1.67
SREBF1-210ENST00000471445 METTL16Q86W50 562 aaKnown RBP25.49■■□□□ 1.67
SREBF1-210ENST00000471445 MIGA1Q8NAN2 632 aa25.49■■□□□ 1.67
SREBF1-210ENST00000471445 PARK7Q99497 189 aaKnown RBP25.49■■□□□ 1.67
SREBF1-210ENST00000471445 CAP2P40123 477 aa25.48■■□□□ 1.67
SREBF1-210ENST00000471445 LACTBP83111 547 aaPredicted RBP25.48■■□□□ 1.67
SREBF1-210ENST00000471445 FASTKD5Q7L8L6 764 aaKnown RBP25.48■■□□□ 1.67
SREBF1-210ENST00000471445 ARHGEF6Q15052 776 aa25.47■■□□□ 1.67
SREBF1-210ENST00000471445 TBC1D2Q9BYX2 928 aa25.47■■□□□ 1.67
SREBF1-210ENST00000471445 PALD1Q9ULE6 856 aa25.47■■□□□ 1.67
SREBF1-210ENST00000471445 TRIM75PA6NK02 468 aa25.46■■□□□ 1.67
SREBF1-210ENST00000471445 DNAJC2Q99543 621 aaKnown RBP25.46■■□□□ 1.67
SREBF1-210ENST00000471445 RIOK1Q9BRS2 568 aaKnown RBP25.46■■□□□ 1.67
SREBF1-210ENST00000471445 LRRCC1Q9C099 1032 aa25.46■■□□□ 1.67
SREBF1-210ENST00000471445 ARHGAP39Q9C0H5 1083 aa25.46■■□□□ 1.67
SREBF1-210ENST00000471445 CPA4Q9UI42 421 aa25.46■■□□□ 1.67
SREBF1-210ENST00000471445 SLC45A1Q9Y2W3 748 aa25.46■■□□□ 1.67
SREBF1-210ENST00000471445 HTTP42858 3142 aa25.45■■□□□ 1.66
SREBF1-210ENST00000471445 GOLIM4O00461 696 aa25.45■■□□□ 1.66
SREBF1-210ENST00000471445 PDE6AP16499 860 aa25.45■■□□□ 1.66
SREBF1-210ENST00000471445 GADL1Q6ZQY3 521 aa25.45■■□□□ 1.66
SREBF1-210ENST00000471445 FOXP4Q8IVH2 680 aaPredicted RBP25.45■■□□□ 1.66
SREBF1-210ENST00000471445 SAP30BPQ9UHR5 308 aaKnown RBP25.45■■□□□ 1.66
SREBF1-210ENST00000471445 HLA-DOAP06340 250 aa25.44■■□□□ 1.66
SREBF1-210ENST00000471445 ATP5JP18859 108 aa25.44■■□□□ 1.66
SREBF1-210ENST00000471445 KIF22Q14807 665 aa25.44■■□□□ 1.66
SREBF1-210ENST00000471445 CYP2C8P10632 490 aa25.43■■□□□ 1.66
SREBF1-210ENST00000471445 BCRP11274 1271 aa25.43■■□□□ 1.66
SREBF1-210ENST00000471445 USP5P45974 858 aa25.43■■□□□ 1.66
SREBF1-210ENST00000471445 CRACR2BQ8N4Y2 399 aaPredicted RBP25.43■■□□□ 1.66
SREBF1-210ENST00000471445 ZNF280CQ8ND82 737 aa25.43■■□□□ 1.66
SREBF1-210ENST00000471445 ARMC5Q96C12 935 aa25.43■■□□□ 1.66
SREBF1-210ENST00000471445 EDC3Q96F86 508 aaKnown RBP25.43■■□□□ 1.66
SREBF1-210ENST00000471445 BCL11AQ9H165 835 aa25.43■■□□□ 1.66
SREBF1-210ENST00000471445 AGTPBP1Q9UPW5 1226 aa25.43■■□□□ 1.66
SREBF1-210ENST00000471445 TCRBV5S4A2TA0A5A2 114 aa25.42■■□□□ 1.66
SREBF1-210ENST00000471445 USP17L5A8MUK1 530 aa25.42■■□□□ 1.66
SREBF1-210ENST00000471445 RRP1P56182 461 aaKnown RBP25.42■■□□□ 1.66
SREBF1-210ENST00000471445 SLC9C2Q5TAH2 1124 aa25.42■■□□□ 1.66
SREBF1-210ENST00000471445 PROCA1Q8NCQ7 364 aaPredicted RBP25.42■■□□□ 1.66
SREBF1-210ENST00000471445 BOLA2Q9H3K6 86 aa25.42■■□□□ 1.66
SREBF1-210ENST00000471445 PAG1Q9NWQ8 432 aa25.42■■□□□ 1.66
SREBF1-210ENST00000471445 PTCH2Q9Y6C5 1203 aa25.42■■□□□ 1.66
SREBF1-210ENST00000471445 ZNF532Q9HCE3 1301 aa25.41■■□□□ 1.66
SREBF1-210ENST00000471445 SMARCA5O60264 1052 aaPredicted RBP25.41■■□□□ 1.66
SREBF1-210ENST00000471445 GNRH1P01148 92 aa25.41■■□□□ 1.66
SREBF1-210ENST00000471445 ASNSP08243 561 aa25.41■■□□□ 1.66
SREBF1-210ENST00000471445 CTGFP29279 349 aa25.41■■□□□ 1.66
SREBF1-210ENST00000471445 SPP2Q13103 211 aa25.41■■□□□ 1.66
SREBF1-210ENST00000471445 HAUS7Q99871 368 aa25.41■■□□□ 1.66
SREBF1-210ENST00000471445 TRIM34Q9BYJ4 488 aa25.41■■□□□ 1.66
SREBF1-210ENST00000471445 EHD4Q9H223 541 aa25.41■■□□□ 1.66
SREBF1-210ENST00000471445 DCTPP1Q9H773 170 aa25.41■■□□□ 1.66
SREBF1-210ENST00000471445 AS3MTQ9HBK9 375 aa25.41■■□□□ 1.66
SREBF1-210ENST00000471445 GINM1Q9NU53 330 aa25.41■■□□□ 1.66
SREBF1-210ENST00000471445 MYH8P13535 1937 aa25.4■■□□□ 1.66
SREBF1-210ENST00000471445 MAGEB6P1A0A0J9YX57 407 aa25.4■■□□□ 1.66
SREBF1-210ENST00000471445 JAG1P78504 1218 aa25.4■■□□□ 1.66
SREBF1-210ENST00000471445 SLC4A8Q2Y0W8 1093 aa25.4■■□□□ 1.66
SREBF1-210ENST00000471445 SH3D19Q5HYK7 790 aa25.39■■□□□ 1.66
SREBF1-210ENST00000471445 TREML2Q5T2D2 321 aa25.39■■□□□ 1.66
SREBF1-210ENST00000471445 WDR18Q9BV38 432 aa25.39■■□□□ 1.66
SREBF1-210ENST00000471445 ZBTB21Q9ULJ3 1066 aa25.39■■□□□ 1.66
SREBF1-210ENST00000471445 BAZ2AQ9UIF9 1905 aaKnown RBP25.39■■□□□ 1.65
SREBF1-210ENST00000471445 GDF11O95390 407 aa25.38■■□□□ 1.65
SREBF1-210ENST00000471445 ADD2P35612 726 aa25.38■■□□□ 1.65
SREBF1-210ENST00000471445 PRMT2P55345 433 aa25.38■■□□□ 1.65
SREBF1-210ENST00000471445 SHROOM1Q2M3G4 852 aaPredicted RBP25.38■■□□□ 1.65
SREBF1-210ENST00000471445 TRIM47Q96LD4 638 aa25.38■■□□□ 1.65
SREBF1-210ENST00000471445 PSMC4P43686 418 aa25.37■■□□□ 1.65
SREBF1-210ENST00000471445 HMGCS2P54868 508 aa25.37■■□□□ 1.65
SREBF1-210ENST00000471445 TATDN1Q6P1N9 297 aa25.37■■□□□ 1.65
SREBF1-210ENST00000471445 LCORLQ8N3X6 602 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms