RNA–Protein interactions for RNA: ENST00000470199.2

LMNA-211, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-211ENST00000470199 DHX36Q9H2U1 1008 aaKnown RBP21.51■■□□□ 1.03
LMNA-211ENST00000470199 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.51■■□□□ 1.03
LMNA-211ENST00000470199 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.51■■□□□ 1.03
LMNA-211ENST00000470199 SLC4A4Q9Y6R1 1079 aa21.51■■□□□ 1.03
LMNA-211ENST00000470199 PCNTO95613 3336 aa21.5■■□□□ 1.03
LMNA-211ENST00000470199 UNCXA6NJT0 531 aa21.5■■□□□ 1.03
LMNA-211ENST00000470199 TBC1D12O60347 775 aa21.5■■□□□ 1.03
LMNA-211ENST00000470199 GSPT1P15170 499 aaKnown RBP21.5■■□□□ 1.03
LMNA-211ENST00000470199 PLCD1P51178 756 aa21.5■■□□□ 1.03
LMNA-211ENST00000470199 CCDC136Q96JN2 1154 aa21.5■■□□□ 1.03
LMNA-211ENST00000470199 PI4KBQ9UBF8 816 aa21.5■■□□□ 1.03
LMNA-211ENST00000470199 CSADQ9Y600 493 aa21.5■■□□□ 1.03
LMNA-211ENST00000470199 GPAA1O43292 621 aa21.49■■□□□ 1.03
LMNA-211ENST00000470199 HSPA1AP0DMV8 641 aaKnown RBP21.49■■□□□ 1.03
LMNA-211ENST00000470199 HSPA1BP0DMV9 641 aaKnown RBP21.49■■□□□ 1.03
LMNA-211ENST00000470199 JAG1P78504 1218 aa21.49■■□□□ 1.03
LMNA-211ENST00000470199 SHROOM1Q2M3G4 852 aaPredicted RBP21.49■■□□□ 1.03
LMNA-211ENST00000470199 CCDC129Q6ZRS4 1044 aa21.49■■□□□ 1.03
LMNA-211ENST00000470199 FAM227BQ96M60 508 aa21.49■■□□□ 1.03
LMNA-211ENST00000470199 WBP1LQ9NX94 342 aa21.49■■□□□ 1.03
LMNA-211ENST00000470199 MCM9Q9NXL9 1143 aa21.49■■□□□ 1.03
LMNA-211ENST00000470199 DDX60LQ5H9U9 1706 aaKnown RBP21.49■■□□□ 1.03
LMNA-211ENST00000470199 CYP2D7A0A087X1C5 515 aa21.48■■□□□ 1.03
LMNA-211ENST00000470199 TTC22Q5TAA0 569 aa21.48■■□□□ 1.03
LMNA-211ENST00000470199 CCDC84Q86UT8 332 aaPredicted RBP21.48■■□□□ 1.03
LMNA-211ENST00000470199 METTL16Q86W50 562 aaKnown RBP21.48■■□□□ 1.03
LMNA-211ENST00000470199 OTUD5Q96G74 571 aa21.48■■□□□ 1.03
LMNA-211ENST00000470199 A0A0D9SFI3 127 aa21.47■■□□□ 1.03
LMNA-211ENST00000470199 SPDYE5A6NIY4 337 aa21.47■■□□□ 1.03
LMNA-211ENST00000470199 GSG1L2A8MUP6 293 aa21.47■■□□□ 1.03
LMNA-211ENST00000470199 NOL9Q5SY16 702 aaKnown RBP21.47■■□□□ 1.03
LMNA-211ENST00000470199 MYH1P12882 1939 aa21.47■■□□□ 1.03
LMNA-211ENST00000470199 NAV1Q8NEY1 1877 aa21.46■■□□□ 1.03
LMNA-211ENST00000470199 POLR3DP05423 398 aaPredicted RBP21.46■■□□□ 1.03
LMNA-211ENST00000470199 HLA-DOAP06340 250 aa21.46■■□□□ 1.03
LMNA-211ENST00000470199 NMIQ13287 307 aaPredicted RBP21.46■■□□□ 1.03
LMNA-211ENST00000470199 LRRFIP1Q32MZ4 808 aaKnown RBP21.46■■□□□ 1.03
LMNA-211ENST00000470199 FOXP4Q8IVH2 680 aaPredicted RBP21.46■■□□□ 1.03
LMNA-211ENST00000470199 SCYL3Q8IZE3 742 aa21.46■■□□□ 1.03
LMNA-211ENST00000470199 CRACR2BQ8N4Y2 399 aaPredicted RBP21.46■■□□□ 1.03
LMNA-211ENST00000470199 EPB41L4AQ9HCS5 686 aaPredicted RBP21.46■■□□□ 1.03
LMNA-211ENST00000470199 ATP8A2Q9NTI2 1148 aa21.46■■□□□ 1.03
LMNA-211ENST00000470199 HERC5Q9UII4 1024 aaKnown RBP21.46■■□□□ 1.03
LMNA-211ENST00000470199 USP17L12C9JPN9 530 aa21.45■■□□□ 1.02
LMNA-211ENST00000470199 USP17L21D6R901 530 aa21.45■■□□□ 1.02
LMNA-211ENST00000470199 FOXN1O15353 648 aa21.45■■□□□ 1.02
LMNA-211ENST00000470199 FOXP2O15409 715 aa21.45■■□□□ 1.02
LMNA-211ENST00000470199 ZBTB48P10074 688 aaPredicted RBP21.45■■□□□ 1.02
LMNA-211ENST00000470199 SDSP20132 328 aa21.45■■□□□ 1.02
LMNA-211ENST00000470199 MAP2K1Q02750 393 aaPredicted RBP21.45■■□□□ 1.02
LMNA-211ENST00000470199 ERO1BQ86YB8 467 aa21.45■■□□□ 1.02
LMNA-211ENST00000470199 DYNLL2Q96FJ2 89 aa21.45■■□□□ 1.02
LMNA-211ENST00000470199 TSKSQ9UJT2 592 aa21.45■■□□□ 1.02
LMNA-211ENST00000470199 IRF6O14896 467 aa21.44■■□□□ 1.02
LMNA-211ENST00000470199 CTNND1O60716 968 aaKnown RBP21.44■■□□□ 1.02
LMNA-211ENST00000470199 GDF11O95390 407 aa21.44■■□□□ 1.02
LMNA-211ENST00000470199 CTR9Q6PD62 1173 aa21.44■■□□□ 1.02
LMNA-211ENST00000470199 TTC6Q86TZ1 520 aa21.44■■□□□ 1.02
LMNA-211ENST00000470199 MS4A4AQ96JQ5 239 aa21.44■■□□□ 1.02
LMNA-211ENST00000470199 PTPRAP18433 802 aa21.43■■□□□ 1.02
LMNA-211ENST00000470199 CAP2P40123 477 aa21.43■■□□□ 1.02
LMNA-211ENST00000470199 GABPAQ06546 454 aa21.43■■□□□ 1.02
LMNA-211ENST00000470199 VPS53Q5VIR6 699 aa21.43■■□□□ 1.02
LMNA-211ENST00000470199 SLC44A5Q8NCS7 719 aa21.43■■□□□ 1.02
LMNA-211ENST00000470199 EHD4Q9H223 541 aa21.43■■□□□ 1.02
LMNA-211ENST00000470199 SERPINB13Q9UIV8 391 aa21.43■■□□□ 1.02
LMNA-211ENST00000470199 SHMT1P34896 483 aa21.42■■□□□ 1.02
LMNA-211ENST00000470199 TM4SF4P48230 202 aa21.42■■□□□ 1.02
LMNA-211ENST00000470199 C12orf60Q5U649 245 aa21.42■■□□□ 1.02
LMNA-211ENST00000470199 ZNF589Q86UQ0 364 aaPredicted RBP21.42■■□□□ 1.02
LMNA-211ENST00000470199 PTPN18Q99952 460 aa21.42■■□□□ 1.02
LMNA-211ENST00000470199 TRIM34Q9BYJ4 488 aa21.42■■□□□ 1.02
LMNA-211ENST00000470199 HELLSQ9NRZ9 838 aa21.42■■□□□ 1.02
LMNA-211ENST00000470199 BAZ2AQ9UIF9 1905 aaKnown RBP21.42■■□□□ 1.02
LMNA-211ENST00000470199 ZHX2Q9Y6X8 837 aa21.42■■□□□ 1.02
LMNA-211ENST00000470199 PATL2C9JE40 543 aaKnown RBP21.41■■□□□ 1.02
LMNA-211ENST00000470199 IGF2BP3O00425 579 aaKnown RBP eCLIP21.41■■□□□ 1.02
LMNA-211ENST00000470199 APPP05067 770 aa21.41■■□□□ 1.02
LMNA-211ENST00000470199 PPATQ06203 517 aa21.41■■□□□ 1.02
LMNA-211ENST00000470199 PPIL2Q13356 520 aa21.41■■□□□ 1.02
LMNA-211ENST00000470199 TATDN1Q6P1N9 297 aa21.41■■□□□ 1.02
LMNA-211ENST00000470199 IFNL3Q8IZI9 196 aa21.41■■□□□ 1.02
LMNA-211ENST00000470199 BRI3BPQ8WY22 251 aa21.41■■□□□ 1.02
LMNA-211ENST00000470199 PICK1Q9NRD5 415 aa21.41■■□□□ 1.02
LMNA-211ENST00000470199 RNF186Q9NXI6 227 aa21.41■■□□□ 1.02
LMNA-211ENST00000470199 MANSC4A6NHS7 340 aaPredicted RBP21.4■■□□□ 1.02
LMNA-211ENST00000470199 TRPA1O75762 1119 aa21.4■■□□□ 1.02
LMNA-211ENST00000470199 MCMDC2Q4G0Z9 681 aa21.4■■□□□ 1.02
LMNA-211ENST00000470199 STK11IPQ8N1F8 1099 aa21.4■■□□□ 1.02
LMNA-211ENST00000470199 PPP4R2Q9NY27 417 aa21.4■■□□□ 1.02
LMNA-211ENST00000470199 DOCK1Q14185 1865 aa21.39■■□□□ 1.02
LMNA-211ENST00000470199 CCL15-CCL14A0A0B4J2E2 113 aa21.39■■□□□ 1.01
LMNA-211ENST00000470199 TESPA1A2RU30 521 aaPredicted RBP21.39■■□□□ 1.01
LMNA-211ENST00000470199 GNAT2P19087 354 aa21.39■■□□□ 1.01
LMNA-211ENST00000470199 CCL15Q16663 113 aa21.39■■□□□ 1.01
LMNA-211ENST00000470199 CWC27Q6UX04 472 aaKnown RBP21.39■■□□□ 1.01
LMNA-211ENST00000470199 IL25Q9H293 177 aa21.39■■□□□ 1.01
LMNA-211ENST00000470199 AFG3L2Q9Y4W6 797 aa21.39■■□□□ 1.01
LMNA-211ENST00000470199 MINDY4BA8MYZ0 360 aa21.38■■□□□ 1.01
LMNA-211ENST00000470199 HSPA8P11142 646 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms