RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 SPTY2D1Q68D10 685 aaPredicted RBP23.57■■□□□ 1.36
NCKIPSD-209ENST00000470006 ZNF280CQ8ND82 737 aa23.57■■□□□ 1.36
NCKIPSD-209ENST00000470006 ASCC2Q9H1I8 757 aaPredicted RBP23.57■■□□□ 1.36
NCKIPSD-209ENST00000470006 OGDHLQ9ULD0 1010 aa23.57■■□□□ 1.36
NCKIPSD-209ENST00000470006 UNC80Q8N2C7 3258 aa23.57■■□□□ 1.36
NCKIPSD-209ENST00000470006 COL25A1Q9BXS0 654 aaPredicted RBP23.56■■□□□ 1.36
NCKIPSD-209ENST00000470006 PRKAR2AP13861 404 aaKnown RBP23.55■■□□□ 1.36
NCKIPSD-209ENST00000470006 CCDC102BQ68D86 513 aa23.55■■□□□ 1.36
NCKIPSD-209ENST00000470006 TRIB2Q92519 343 aa23.55■■□□□ 1.36
NCKIPSD-209ENST00000470006 OSBPL5Q9H0X9 879 aaPredicted RBP23.55■■□□□ 1.36
NCKIPSD-209ENST00000470006 RFX7Q2KHR2 1363 aa23.54■■□□□ 1.36
NCKIPSD-209ENST00000470006 TBC1D12O60347 775 aa23.54■■□□□ 1.36
NCKIPSD-209ENST00000470006 CIAO1O76071 339 aa23.54■■□□□ 1.36
NCKIPSD-209ENST00000470006 ADORA1P30542 326 aa23.54■■□□□ 1.36
NCKIPSD-209ENST00000470006 IRX3P78415 501 aaPredicted RBP23.54■■□□□ 1.36
NCKIPSD-209ENST00000470006 MDM2Q00987 491 aaPredicted RBP23.54■■□□□ 1.36
NCKIPSD-209ENST00000470006 FBXO3Q9UK99 471 aa23.54■■□□□ 1.36
NCKIPSD-209ENST00000470006 MROH7-TTC4A0A0A0MT08 1334 aa23.54■■□□□ 1.36
NCKIPSD-209ENST00000470006 ERICH6Q7L0X2 663 aa23.53■■□□□ 1.36
NCKIPSD-209ENST00000470006 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.53■■□□□ 1.36
NCKIPSD-209ENST00000470006 CCAR1Q8IX12 1150 aaKnown RBP23.53■■□□□ 1.36
NCKIPSD-209ENST00000470006 FAM163AQ96GL9 167 aaPredicted RBP23.53■■□□□ 1.36
NCKIPSD-209ENST00000470006 NUDT12Q9BQG2 462 aa23.53■■□□□ 1.36
NCKIPSD-209ENST00000470006 TBC1D2Q9BYX2 928 aa23.53■■□□□ 1.36
NCKIPSD-209ENST00000470006 ATAD5Q96QE3 1844 aa23.52■■□□□ 1.36
NCKIPSD-209ENST00000470006 USP17L5A8MUK1 530 aa23.52■■□□□ 1.36
NCKIPSD-209ENST00000470006 IL15P40933 162 aaPredicted RBP23.52■■□□□ 1.36
NCKIPSD-209ENST00000470006 RASGRF1Q13972 1273 aa23.52■■□□□ 1.36
NCKIPSD-209ENST00000470006 AS3MTQ9HBK9 375 aa23.52■■□□□ 1.36
NCKIPSD-209ENST00000470006 PFASO15067 1338 aa23.52■■□□□ 1.36
NCKIPSD-209ENST00000470006 LOC285556D6RIA3 1793 aa23.52■■□□□ 1.36
NCKIPSD-209ENST00000470006 UBTFL1P0CB47 393 aaPredicted RBP23.51■■□□□ 1.35
NCKIPSD-209ENST00000470006 PDE3AQ14432 1141 aa23.51■■□□□ 1.35
NCKIPSD-209ENST00000470006 FAM161BQ96MY7 647 aa23.51■■□□□ 1.35
NCKIPSD-209ENST00000470006 TMOD4Q9NZQ9 345 aa23.51■■□□□ 1.35
NCKIPSD-209ENST00000470006 ZKSCAN1P17029 563 aaPredicted RBP23.5■■□□□ 1.35
NCKIPSD-209ENST00000470006 CAP2P40123 477 aa23.5■■□□□ 1.35
NCKIPSD-209ENST00000470006 MECOMQ03112 1051 aa23.5■■□□□ 1.35
NCKIPSD-209ENST00000470006 PA2G4Q9UQ80 394 aaKnown RBP23.5■■□□□ 1.35
NCKIPSD-209ENST00000470006 PLXNB2O15031 1838 aa23.49■■□□□ 1.35
NCKIPSD-209ENST00000470006 GPR75-ASB3A0A0A6YYF3 556 aa23.49■■□□□ 1.35
NCKIPSD-209ENST00000470006 RHBDL3P58872 404 aa23.49■■□□□ 1.35
NCKIPSD-209ENST00000470006 TIMM10P62072 90 aa23.49■■□□□ 1.35
NCKIPSD-209ENST00000470006 MAP3K21Q5TCX8 1036 aa23.49■■□□□ 1.35
NCKIPSD-209ENST00000470006 TRMT44Q8IYL2 757 aaKnown RBP23.49■■□□□ 1.35
NCKIPSD-209ENST00000470006 FAM9BQ8IZU0 186 aa23.49■■□□□ 1.35
NCKIPSD-209ENST00000470006 GPRC5AQ8NFJ5 357 aa23.49■■□□□ 1.35
NCKIPSD-209ENST00000470006 SOCS4Q8WXH5 440 aa23.49■■□□□ 1.35
NCKIPSD-209ENST00000470006 SSH1Q8WYL5 1049 aa23.49■■□□□ 1.35
NCKIPSD-209ENST00000470006 LBHD1Q9BQE6 289 aaPredicted RBP23.49■■□□□ 1.35
NCKIPSD-209ENST00000470006 CWC22Q9HCG8 908 aaKnown RBP23.49■■□□□ 1.35
NCKIPSD-209ENST00000470006 MORF4L1Q9UBU8 362 aa23.49■■□□□ 1.35
NCKIPSD-209ENST00000470006 PEX10O60683 326 aa23.48■■□□□ 1.35
NCKIPSD-209ENST00000470006 LDHCP07864 332 aa23.48■■□□□ 1.35
NCKIPSD-209ENST00000470006 CACNB2Q08289 660 aaPredicted RBP23.48■■□□□ 1.35
NCKIPSD-209ENST00000470006 LRRC26Q2I0M4 334 aa23.48■■□□□ 1.35
NCKIPSD-209ENST00000470006 P2RX7Q99572 595 aaKnown RBP23.48■■□□□ 1.35
NCKIPSD-209ENST00000470006 XRCC5P13010 732 aaKnown RBP23.47■■□□□ 1.35
NCKIPSD-209ENST00000470006 GSTO1P78417 241 aa23.47■■□□□ 1.35
NCKIPSD-209ENST00000470006 MTMR2Q13614 643 aa23.47■■□□□ 1.35
NCKIPSD-209ENST00000470006 SH3D19Q5HYK7 790 aa23.47■■□□□ 1.35
NCKIPSD-209ENST00000470006 NPM3O75607 178 aaKnown RBP23.46■■□□□ 1.35
NCKIPSD-209ENST00000470006 CCND3P30281 292 aaPredicted RBP23.46■■□□□ 1.35
NCKIPSD-209ENST00000470006 RRP1BQ14684 758 aaKnown RBP23.46■■□□□ 1.35
NCKIPSD-209ENST00000470006 PDS5AQ29RF7 1337 aaKnown RBP23.45■■□□□ 1.34
NCKIPSD-209ENST00000470006 ANP32CO43423 234 aa23.45■■□□□ 1.34
NCKIPSD-209ENST00000470006 COL6A1P12109 1028 aa23.45■■□□□ 1.34
NCKIPSD-209ENST00000470006 MAPK4P31152 587 aa23.45■■□□□ 1.34
NCKIPSD-209ENST00000470006 RGS2P41220 211 aa23.45■■□□□ 1.34
NCKIPSD-209ENST00000470006 HERVK_113P62684 666 aa23.45■■□□□ 1.34
NCKIPSD-209ENST00000470006 TEX11Q8IYF3 940 aa23.45■■□□□ 1.34
NCKIPSD-209ENST00000470006 XAGE2Q96GT9 111 aa23.45■■□□□ 1.34
NCKIPSD-209ENST00000470006 RAI14Q9P0K7 980 aa23.45■■□□□ 1.34
NCKIPSD-209ENST00000470006 HERC5Q9UII4 1024 aaKnown RBP23.45■■□□□ 1.34
NCKIPSD-209ENST00000470006 MAP4K4O95819 1239 aaPredicted RBP23.44■■□□□ 1.34
NCKIPSD-209ENST00000470006 BACE1P56817 501 aa23.44■■□□□ 1.34
NCKIPSD-209ENST00000470006 MVPQ14764 893 aaKnown RBP23.44■■□□□ 1.34
NCKIPSD-209ENST00000470006 GORABQ5T7V8 394 aa23.44■■□□□ 1.34
NCKIPSD-209ENST00000470006 NEUROD6Q96NK8 337 aa23.44■■□□□ 1.34
NCKIPSD-209ENST00000470006 GUCD1Q96NT3 240 aa23.44■■□□□ 1.34
NCKIPSD-209ENST00000470006 NOL10Q9BSC4 688 aaKnown RBP23.44■■□□□ 1.34
NCKIPSD-209ENST00000470006 PAGR1Q9BTK6 254 aa23.44■■□□□ 1.34
NCKIPSD-209ENST00000470006 TRIM34Q9BYJ4 488 aa23.44■■□□□ 1.34
NCKIPSD-209ENST00000470006 SENP6Q9GZR1 1112 aaPredicted RBP23.44■■□□□ 1.34
NCKIPSD-209ENST00000470006 TXNRD2Q9NNW7 524 aa23.44■■□□□ 1.34
NCKIPSD-209ENST00000470006 HDAC5Q9UQL6 1122 aa23.44■■□□□ 1.34
NCKIPSD-209ENST00000470006 AKAP2Q9Y2D5 859 aa23.44■■□□□ 1.34
NCKIPSD-209ENST00000470006 A0A1B0GUL7 405 aa23.43■■□□□ 1.34
NCKIPSD-209ENST00000470006 POTEB2H3BUK9 544 aa23.43■■□□□ 1.34
NCKIPSD-209ENST00000470006 CCL14Q16627 93 aa23.43■■□□□ 1.34
NCKIPSD-209ENST00000470006 ZNF697Q5TEC3 545 aa23.43■■□□□ 1.34
NCKIPSD-209ENST00000470006 FAM109BQ6ICB4 259 aaPredicted RBP23.43■■□□□ 1.34
NCKIPSD-209ENST00000470006 WDR18Q9BV38 432 aa23.43■■□□□ 1.34
NCKIPSD-209ENST00000470006 PRKAG2Q9UGJ0 569 aa23.43■■□□□ 1.34
NCKIPSD-209ENST00000470006 LAMA2P24043 3122 aaKnown RBP23.43■■□□□ 1.34
NCKIPSD-209ENST00000470006 ZBTB22O15209 634 aa23.42■■□□□ 1.34
NCKIPSD-209ENST00000470006 HOXA7P31268 230 aaPredicted RBP23.42■■□□□ 1.34
NCKIPSD-209ENST00000470006 LHX8Q68G74 356 aa23.42■■□□□ 1.34
NCKIPSD-209ENST00000470006 TBC1D9Q6ZT07 1266 aa23.42■■□□□ 1.34
NCKIPSD-209ENST00000470006 GPR142Q7Z601 462 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms