RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 IGF2BP3O00425 579 aaKnown RBP eCLIP6.42□□□□□ -1.38
TM9SF3-203ENST00000464654 YBX3P16989 372 aaKnown RBP eCLIP6.42□□□□□ -1.381e-12■■□□□ 12.8
TM9SF3-203ENST00000464654 XPCQ01831 940 aaPredicted RBP6.42□□□□□ -1.38
TM9SF3-203ENST00000464654 TAF1CQ15572 869 aaPredicted RBP6.42□□□□□ -1.38
TM9SF3-203ENST00000464654 CDC37L1Q7L3B6 337 aa6.42□□□□□ -1.38
TM9SF3-203ENST00000464654 ZNF507Q8TCN5 953 aa6.42□□□□□ -1.38
TM9SF3-203ENST00000464654 NETO1Q8TDF5 533 aa6.42□□□□□ -1.38
TM9SF3-203ENST00000464654 KRTAP4-2Q9BYR5 136 aa6.42□□□□□ -1.38
TM9SF3-203ENST00000464654 RNF19AQ9NV58 838 aa6.42□□□□□ -1.38
TM9SF3-203ENST00000464654 ADGRE2Q9UHX3 823 aa6.42□□□□□ -1.38
TM9SF3-203ENST00000464654 USP31Q70CQ4 1352 aa6.42□□□□□ -1.38
TM9SF3-203ENST00000464654 LEFTY1O75610 366 aa6.41□□□□□ -1.38
TM9SF3-203ENST00000464654 LIG3P49916 1009 aa6.41□□□□□ -1.38
TM9SF3-203ENST00000464654 PTPN11Q06124 597 aaPredicted RBP6.41□□□□□ -1.38
TM9SF3-203ENST00000464654 INPP5AQ14642 412 aa6.41□□□□□ -1.38
TM9SF3-203ENST00000464654 LRFN4Q6PJG9 635 aa6.41□□□□□ -1.38
TM9SF3-203ENST00000464654 BCL7CQ8WUZ0 217 aaPredicted RBP6.41□□□□□ -1.38
TM9SF3-203ENST00000464654 CRELD1Q96HD1 420 aa6.41□□□□□ -1.38
TM9SF3-203ENST00000464654 GZF1Q9H116 711 aaPredicted RBP6.41□□□□□ -1.38
TM9SF3-203ENST00000464654 PRDM10Q9NQV6 1147 aa6.41□□□□□ -1.38
TM9SF3-203ENST00000464654 SLC5A6Q9Y289 635 aa6.41□□□□□ -1.38
TM9SF3-203ENST00000464654 CSADQ9Y600 493 aa6.41□□□□□ -1.38
TM9SF3-203ENST00000464654 LRIG2O94898 1065 aa6.4□□□□□ -1.38
TM9SF3-203ENST00000464654 LMNB1P20700 586 aa6.4□□□□□ -1.38
TM9SF3-203ENST00000464654 OXCT1P55809 520 aa6.4□□□□□ -1.38
TM9SF3-203ENST00000464654 IFI16Q16666 785 aaKnown RBP6.4□□□□□ -1.38
TM9SF3-203ENST00000464654 MEI1Q5TIA1 1274 aa6.4□□□□□ -1.38
TM9SF3-203ENST00000464654 FAM214BQ7L5A3 538 aa6.4□□□□□ -1.38
TM9SF3-203ENST00000464654 CCDC84Q86UT8 332 aaPredicted RBP6.4□□□□□ -1.38
TM9SF3-203ENST00000464654 ABI1Q8IZP0 508 aa6.4□□□□□ -1.38
TM9SF3-203ENST00000464654 TOP6BLQ8N6T0 577 aa6.4□□□□□ -1.38
TM9SF3-203ENST00000464654 PLPPR2Q96GM1 343 aa6.4□□□□□ -1.38
TM9SF3-203ENST00000464654 WNT10AQ9GZT5 417 aa6.4□□□□□ -1.38
TM9SF3-203ENST00000464654 PAK6Q9NQU5 681 aaPredicted RBP6.4□□□□□ -1.38
TM9SF3-203ENST00000464654 GTF2IRD1Q9UHL9 959 aa6.4□□□□□ -1.38
TM9SF3-203ENST00000464654 VAV3Q9UKW4 847 aa6.4□□□□□ -1.38
TM9SF3-203ENST00000464654 GFRA2O00451 464 aa6.39□□□□□ -1.39
TM9SF3-203ENST00000464654 SORBS3O60504 671 aa6.39□□□□□ -1.39
TM9SF3-203ENST00000464654 CTSHP09668 335 aa6.39□□□□□ -1.39
TM9SF3-203ENST00000464654 PRKCQQ04759 706 aa6.39□□□□□ -1.39
TM9SF3-203ENST00000464654 WIPI1Q5MNZ9 446 aaPredicted RBP6.39□□□□□ -1.39
TM9SF3-203ENST00000464654 CBLL1Q75N03 491 aa6.39□□□□□ -1.39
TM9SF3-203ENST00000464654 ARMCX6Q7L4S7 300 aa6.39□□□□□ -1.39
TM9SF3-203ENST00000464654 TP53INP2Q8IXH6 220 aa6.39□□□□□ -1.39
TM9SF3-203ENST00000464654 PLD6Q8N2A8 252 aaKnown RBP6.39□□□□□ -1.39
TM9SF3-203ENST00000464654 FLCNQ8NFG4 579 aa6.39□□□□□ -1.39
TM9SF3-203ENST00000464654 MIR1-1HGQ9H1L0 117 aa6.39□□□□□ -1.39
TM9SF3-203ENST00000464654 TNKS2Q9H2K2 1166 aa6.39□□□□□ -1.39
TM9SF3-203ENST00000464654 SNX11Q9Y5W9 270 aa6.39□□□□□ -1.39
TM9SF3-203ENST00000464654 TMEM265A0A087WTH1 108 aa6.38□□□□□ -1.39
TM9SF3-203ENST00000464654 CEACAM5P06731 702 aa6.38□□□□□ -1.39
TM9SF3-203ENST00000464654 TAL1P17542 331 aaPredicted RBP6.38□□□□□ -1.39
TM9SF3-203ENST00000464654 TSNAXIP1Q2TAA8 658 aa6.38□□□□□ -1.39
TM9SF3-203ENST00000464654 DIEXFQ68CQ4 756 aaKnown RBP6.38□□□□□ -1.39
TM9SF3-203ENST00000464654 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.38□□□□□ -1.39
TM9SF3-203ENST00000464654 UBE3DQ7Z6J8 389 aa6.38□□□□□ -1.39
TM9SF3-203ENST00000464654 HID1Q8IV36 788 aa6.38□□□□□ -1.39
TM9SF3-203ENST00000464654 FAM181AQ8N9Y4 354 aa6.38□□□□□ -1.39
TM9SF3-203ENST00000464654 HEXIM2Q96MH2 286 aaKnown RBP6.38□□□□□ -1.39
TM9SF3-203ENST00000464654 PRAMEF27A3QJZ7 478 aa6.37□□□□□ -1.39
TM9SF3-203ENST00000464654 PAX4O43316 350 aa6.37□□□□□ -1.39
TM9SF3-203ENST00000464654 SLBPQ14493 270 aaKnown RBP eCLIP6.37□□□□□ -1.39
TM9SF3-203ENST00000464654 ARHGAP27Q6ZUM4 889 aa6.37□□□□□ -1.39
TM9SF3-203ENST00000464654 C22orf34Q6ZV56 151 aa6.37□□□□□ -1.39
TM9SF3-203ENST00000464654 WFDC3Q8IUB2 231 aa6.37□□□□□ -1.39
TM9SF3-203ENST00000464654 MFSD2AQ8NA29 543 aa6.37□□□□□ -1.39
TM9SF3-203ENST00000464654 PHC3Q8NDX5 983 aa6.37□□□□□ -1.39
TM9SF3-203ENST00000464654 FOXQ1Q9C009 403 aa6.37□□□□□ -1.39
TM9SF3-203ENST00000464654 MRS2Q9HD23 443 aa6.37□□□□□ -1.39
TM9SF3-203ENST00000464654 MAPK8IP1Q9UQF2 711 aa6.37□□□□□ -1.39
TM9SF3-203ENST00000464654 PCDHB5Q9Y5E4 795 aa6.37□□□□□ -1.39
TM9SF3-203ENST00000464654 EOMESO95936 686 aa6.36□□□□□ -1.39
TM9SF3-203ENST00000464654 TFE3P19532 575 aaPredicted RBP6.36□□□□□ -1.39
TM9SF3-203ENST00000464654 ETF1P62495 437 aaKnown RBP6.36□□□□□ -1.39
TM9SF3-203ENST00000464654 SEPT6Q14141 434 aa6.36□□□□□ -1.39
TM9SF3-203ENST00000464654 HRASLS5Q96KN8 279 aa6.36□□□□□ -1.39
TM9SF3-203ENST00000464654 FMNL2Q96PY5 1086 aa6.36□□□□□ -1.39
TM9SF3-203ENST00000464654 FBRSQ9HAH7 460 aa6.36□□□□□ -1.39
TM9SF3-203ENST00000464654 PLAGL2Q9UPG8 496 aa6.36□□□□□ -1.39
TM9SF3-203ENST00000464654 U3KQE9 123 aa6.36□□□□□ -1.39
TM9SF3-203ENST00000464654 CST3P01034 146 aaPredicted RBP6.35□□□□□ -1.39
TM9SF3-203ENST00000464654 TXKP42681 527 aa6.35□□□□□ -1.39
TM9SF3-203ENST00000464654 RPL6Q02878 288 aaKnown RBP6.35□□□□□ -1.39
TM9SF3-203ENST00000464654 PWP1Q13610 501 aa6.35□□□□□ -1.39
TM9SF3-203ENST00000464654 MAP3K11Q16584 847 aa6.35□□□□□ -1.39
TM9SF3-203ENST00000464654 ZNF746Q6NUN9 644 aaPredicted RBP6.35□□□□□ -1.39
TM9SF3-203ENST00000464654 SPRED2Q7Z698 418 aa6.35□□□□□ -1.39
TM9SF3-203ENST00000464654 MRPL41Q8IXM3 137 aaKnown RBP6.35□□□□□ -1.39
TM9SF3-203ENST00000464654 COX4I2Q96KJ9 171 aa6.35□□□□□ -1.39
TM9SF3-203ENST00000464654 FAM161BQ96MY7 647 aa6.35□□□□□ -1.39
TM9SF3-203ENST00000464654 RSRP1Q9BUV0 290 aa6.35□□□□□ -1.39
TM9SF3-203ENST00000464654 PRDM5Q9NQX1 630 aaPredicted RBP6.35□□□□□ -1.39
TM9SF3-203ENST00000464654 VTI1BQ9UEU0 232 aa6.35□□□□□ -1.39
TM9SF3-203ENST00000464654 ADAM30Q9UKF2 790 aa6.35□□□□□ -1.39
TM9SF3-203ENST00000464654 SLITRK5O94991 958 aa6.34□□□□□ -1.39
TM9SF3-203ENST00000464654 JUNBP17275 347 aaPredicted RBP6.34□□□□□ -1.39
TM9SF3-203ENST00000464654 ITGB5P18084 799 aa6.34□□□□□ -1.39
TM9SF3-203ENST00000464654 FUT4P22083 530 aa6.34□□□□□ -1.39
TM9SF3-203ENST00000464654 GRK4P32298 578 aa6.34□□□□□ -1.39
TM9SF3-203ENST00000464654 CDK8P49336 464 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms