RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 KRBA2Q6ZNG9 492 aa19.49■□□□□ 0.71
ACTB-207ENST00000462494 ADGRA1Q86SQ6 560 aa19.49■□□□□ 0.71
ACTB-207ENST00000462494 CCDC150Q8NCX0 1101 aa19.49■□□□□ 0.71
ACTB-207ENST00000462494 RNF41Q9H4P4 317 aaPredicted RBP19.49■□□□□ 0.71
ACTB-207ENST00000462494 FAM237AA0A1B0GTK4 181 aa19.49■□□□□ 0.71
ACTB-207ENST00000462494 SERPINC1P01008 464 aa19.49■□□□□ 0.71
ACTB-207ENST00000462494 GYG1P46976 350 aa19.49■□□□□ 0.71
ACTB-207ENST00000462494 TOB1P50616 345 aaPredicted RBP19.49■□□□□ 0.71
ACTB-207ENST00000462494 FOXN1O15353 648 aa19.48■□□□□ 0.71
ACTB-207ENST00000462494 MYL5Q02045 173 aa19.48■□□□□ 0.71
ACTB-207ENST00000462494 NR5A1Q13285 461 aa19.48■□□□□ 0.71
ACTB-207ENST00000462494 ZNF654Q8IZM8 581 aa19.48■□□□□ 0.71
ACTB-207ENST00000462494 CRACR2BQ8N4Y2 399 aaPredicted RBP19.48■□□□□ 0.71
ACTB-207ENST00000462494 FANCBQ8NB91 859 aa19.48■□□□□ 0.71
ACTB-207ENST00000462494 HSD3B7Q9H2F3 369 aa19.48■□□□□ 0.71
ACTB-207ENST00000462494 PCDHA5Q9Y5H7 936 aa19.48■□□□□ 0.71
ACTB-207ENST00000462494 CCDC196A0A1B0GTZ2 297 aa19.48■□□□□ 0.71
ACTB-207ENST00000462494 WTIPA6NIX2 430 aaPredicted RBP19.48■□□□□ 0.71
ACTB-207ENST00000462494 DEXIO95424 95 aa19.48■□□□□ 0.71
ACTB-207ENST00000462494 UBASH3AP57075 661 aa19.48■□□□□ 0.71
ACTB-207ENST00000462494 GRIN1Q05586 938 aa19.48■□□□□ 0.71
ACTB-207ENST00000462494 FOXP4Q8IVH2 680 aaPredicted RBP19.48■□□□□ 0.71
ACTB-207ENST00000462494 TMTC2Q8N394 836 aa19.48■□□□□ 0.71
ACTB-207ENST00000462494 ZMYND15Q9H091 742 aa19.48■□□□□ 0.71
ACTB-207ENST00000462494 MAGEB6P1A0A0J9YX57 407 aa19.47■□□□□ 0.71
ACTB-207ENST00000462494 SMIM22K7EJ46 135 aa19.47■□□□□ 0.71
ACTB-207ENST00000462494 TIAM2Q8IVF5 1701 aa19.47■□□□□ 0.71
ACTB-207ENST00000462494 CBX1P83916 185 aa19.47■□□□□ 0.71
ACTB-207ENST00000462494 CFAP100Q494V2 611 aa19.47■□□□□ 0.71
ACTB-207ENST00000462494 DPF2Q92785 391 aa19.47■□□□□ 0.71
ACTB-207ENST00000462494 CDC5LQ99459 802 aaKnown RBP19.47■□□□□ 0.71
ACTB-207ENST00000462494 FOXP1Q9H334 677 aaPredicted RBP19.47■□□□□ 0.71
ACTB-207ENST00000462494 PCDHB6Q9Y5E3 794 aa19.47■□□□□ 0.71
ACTB-207ENST00000462494 PLCH1Q4KWH8 1693 aa19.46■□□□□ 0.71
ACTB-207ENST00000462494 NRDCO43847 1150 aa19.46■□□□□ 0.71
ACTB-207ENST00000462494 RILPL1Q5EBL4 403 aa19.46■□□□□ 0.71
ACTB-207ENST00000462494 E4F1Q66K89 784 aaPredicted RBP19.46■□□□□ 0.71
ACTB-207ENST00000462494 OXER1Q8TDS5 423 aa19.46■□□□□ 0.71
ACTB-207ENST00000462494 NID2Q14112 1375 aa19.46■□□□□ 0.71
ACTB-207ENST00000462494 POLR2DO15514 142 aaKnown RBP19.45■□□□□ 0.7
ACTB-207ENST00000462494 MARCH10Q8NA82 808 aaPredicted RBP19.45■□□□□ 0.7
ACTB-207ENST00000462494 KIF18AQ8NI77 898 aa19.45■□□□□ 0.7
ACTB-207ENST00000462494 ESR2Q92731 530 aa19.45■□□□□ 0.7
ACTB-207ENST00000462494 GNL3LQ9NVN8 582 aaKnown RBP19.45■□□□□ 0.7
ACTB-207ENST00000462494 FANCLQ9NW38 375 aa19.45■□□□□ 0.7
ACTB-207ENST00000462494 TNKSO95271 1327 aa19.45■□□□□ 0.7
ACTB-207ENST00000462494 PTPN21Q16825 1174 aa19.45■□□□□ 0.7
ACTB-207ENST00000462494 HSP90AA4PQ58FG1 418 aa19.45■□□□□ 0.7
ACTB-207ENST00000462494 CABP5Q9NP86 173 aa19.45■□□□□ 0.7
ACTB-207ENST00000462494 HOOK1Q9UJC3 728 aaKnown RBP19.45■□□□□ 0.7
ACTB-207ENST00000462494 FBXO2Q9UK22 296 aaPredicted RBP19.45■□□□□ 0.7
ACTB-207ENST00000462494 PHLPP1O60346 1717 aa19.45■□□□□ 0.7
ACTB-207ENST00000462494 KDM4FA0A1W2PPD8 638 aa19.44■□□□□ 0.7
ACTB-207ENST00000462494 SPDYE4A6NLX3 237 aa19.44■□□□□ 0.7
ACTB-207ENST00000462494 CBFA2T2O43439 604 aa19.44■□□□□ 0.7
ACTB-207ENST00000462494 AKAP17AQ02040 695 aaKnown RBP19.44■□□□□ 0.7
ACTB-207ENST00000462494 ANKRD18AQ8IVF6 992 aa19.44■□□□□ 0.7
ACTB-207ENST00000462494 PDILTQ8N807 584 aa19.44■□□□□ 0.7
ACTB-207ENST00000462494 PPP1R13BQ96KQ4 1090 aa19.44■□□□□ 0.7
ACTB-207ENST00000462494 CDCA7Q9BWT1 371 aaPredicted RBP19.44■□□□□ 0.7
ACTB-207ENST00000462494 KCND1Q9NSA2 647 aa19.44■□□□□ 0.7
ACTB-207ENST00000462494 RTL9Q8NET4 1388 aa19.44■□□□□ 0.7
ACTB-207ENST00000462494 COL16A1Q07092 1604 aaPredicted RBP19.44■□□□□ 0.7
ACTB-207ENST00000462494 CYP2D7A0A087X1C5 515 aa19.44■□□□□ 0.7
ACTB-207ENST00000462494 PTPREP23469 700 aa19.44■□□□□ 0.7
ACTB-207ENST00000462494 DYNLL1P63167 89 aaKnown RBP19.44■□□□□ 0.7
ACTB-207ENST00000462494 PDE4BQ07343 736 aa19.44■□□□□ 0.7
ACTB-207ENST00000462494 SYCP1Q15431 976 aa19.44■□□□□ 0.7
ACTB-207ENST00000462494 ERFEQ4G0M1 354 aa19.44■□□□□ 0.7
ACTB-207ENST00000462494 SERTAD1Q9UHV2 236 aa19.44■□□□□ 0.7
ACTB-207ENST00000462494 ZNF652Q9Y2D9 606 aa19.44■□□□□ 0.7
ACTB-207ENST00000462494 SPATA31A1Q5TZJ5 1347 aa19.44■□□□□ 0.7
ACTB-207ENST00000462494 BCORQ6W2J9 1755 aa19.44■□□□□ 0.7
ACTB-207ENST00000462494 hCG_1642624A0A1W2PR95 340 aa19.43■□□□□ 0.7
ACTB-207ENST00000462494 BMP6P22004 513 aa19.43■□□□□ 0.7
ACTB-207ENST00000462494 POSTNQ15063 836 aa19.43■□□□□ 0.7
ACTB-207ENST00000462494 C3orf67Q6ZVT6 689 aa19.43■□□□□ 0.7
ACTB-207ENST00000462494 PRDM10Q9NQV6 1147 aa19.43■□□□□ 0.7
ACTB-207ENST00000462494 MYH14Q7Z406 1995 aaKnown RBP19.43■□□□□ 0.7
ACTB-207ENST00000462494 COL4A1P02462 1669 aa19.43■□□□□ 0.7
ACTB-207ENST00000462494 PRDM1O75626 825 aa19.43■□□□□ 0.7
ACTB-207ENST00000462494 PRR29P0C7W0 189 aa19.43■□□□□ 0.7
ACTB-207ENST00000462494 MDM2Q00987 491 aaPredicted RBP19.43■□□□□ 0.7
ACTB-207ENST00000462494 BICDL1Q6ZP65 573 aa19.43■□□□□ 0.7
ACTB-207ENST00000462494 GRAMD1CQ8IYS0 662 aa19.43■□□□□ 0.7
ACTB-207ENST00000462494 MTA3Q9BTC8 594 aa19.43■□□□□ 0.7
ACTB-207ENST00000462494 VPS54Q9P1Q0 977 aa19.43■□□□□ 0.7
ACTB-207ENST00000462494 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.43■□□□□ 0.7
ACTB-207ENST00000462494 ZNF215Q9UL58 517 aaPredicted RBP19.43■□□□□ 0.7
ACTB-207ENST00000462494 V9GYY5 206 aaPredicted RBP19.43■□□□□ 0.7
ACTB-207ENST00000462494 DHX8Q14562 1220 aaKnown RBP19.42■□□□□ 0.7
ACTB-207ENST00000462494 CAVIN4Q5BKX8 364 aa19.42■□□□□ 0.7
ACTB-207ENST00000462494 MAN1B1Q9UKM7 699 aa19.42■□□□□ 0.7
ACTB-207ENST00000462494 TMEM232C9JQI7 657 aa19.41■□□□□ 0.7
ACTB-207ENST00000462494 KIF2AO00139 706 aaPredicted RBP19.41■□□□□ 0.7
ACTB-207ENST00000462494 GOLGA8FQ08AF8 430 aa19.41■□□□□ 0.7
ACTB-207ENST00000462494 GOLGA8DPQ0D2H9 430 aa19.41■□□□□ 0.7
ACTB-207ENST00000462494 SEC23AQ15436 765 aa19.41■□□□□ 0.7
ACTB-207ENST00000462494 ENAHQ8N8S7 591 aaPredicted RBP19.41■□□□□ 0.7
ACTB-207ENST00000462494 ZSCAN10Q96SZ4 725 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms