RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 FBXO46Q6PJ61 603 aaPredicted RBP12.38□□□□□ -0.43
SF3A3-204ENST00000462258 OTOP1Q7RTM1 612 aa12.38□□□□□ -0.43
SF3A3-204ENST00000462258 ANKRD23Q86SG2 305 aa12.38□□□□□ -0.43
SF3A3-204ENST00000462258 MIGA1Q8NAN2 632 aa12.38□□□□□ -0.43
SF3A3-204ENST00000462258 TGFBRAP1Q8WUH2 860 aa12.38□□□□□ -0.43
SF3A3-204ENST00000462258 DNAJC2Q99543 621 aaKnown RBP12.38□□□□□ -0.43
SF3A3-204ENST00000462258 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.38□□□□□ -0.43
SF3A3-204ENST00000462258 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.38□□□□□ -0.43
SF3A3-204ENST00000462258 TRIM17Q9Y577 477 aa12.38□□□□□ -0.43
SF3A3-204ENST00000462258 RBBP6Q7Z6E9 1792 aaKnown RBP12.38□□□□□ -0.43
SF3A3-204ENST00000462258 MYH8P13535 1937 aa12.37□□□□□ -0.43
SF3A3-204ENST00000462258 CXCL11O14625 94 aa12.37□□□□□ -0.43
SF3A3-204ENST00000462258 MAPK8IP2Q13387 824 aaPredicted RBP12.37□□□□□ -0.43
SF3A3-204ENST00000462258 TMED8Q6PL24 325 aaPredicted RBP12.37□□□□□ -0.43
SF3A3-204ENST00000462258 CERS3Q8IU89 383 aa12.37□□□□□ -0.43
SF3A3-204ENST00000462258 LRRCC1Q9C099 1032 aa12.37□□□□□ -0.43
SF3A3-204ENST00000462258 DHX36Q9H2U1 1008 aaKnown RBP12.37□□□□□ -0.43
SF3A3-204ENST00000462258 HERC5Q9UII4 1024 aaKnown RBP12.37□□□□□ -0.43
SF3A3-204ENST00000462258 ZHX2Q9Y6X8 837 aa12.37□□□□□ -0.43
SF3A3-204ENST00000462258 MGAMO43451 1857 aa12.37□□□□□ -0.43
SF3A3-204ENST00000462258 A0A0G2JLL6 359 aaPredicted RBP12.36□□□□□ -0.43
SF3A3-204ENST00000462258 GOLIM4O00461 696 aa12.36□□□□□ -0.43
SF3A3-204ENST00000462258 TLR2O60603 784 aa12.36□□□□□ -0.43
SF3A3-204ENST00000462258 HLA-DOAP06340 250 aa12.36□□□□□ -0.43
SF3A3-204ENST00000462258 KCNA4P22459 653 aa12.36□□□□□ -0.43
SF3A3-204ENST00000462258 MOGSQ13724 837 aa12.36□□□□□ -0.43
SF3A3-204ENST00000462258 PRRT2Q7Z6L0 340 aaPredicted RBP12.36□□□□□ -0.43
SF3A3-204ENST00000462258 CCDC84Q86UT8 332 aaPredicted RBP12.36□□□□□ -0.43
SF3A3-204ENST00000462258 TRIM34Q9BYJ4 488 aa12.36□□□□□ -0.43
SF3A3-204ENST00000462258 EFCC1Q9HA90 598 aa12.36□□□□□ -0.43
SF3A3-204ENST00000462258 PI4KBQ9UBF8 816 aa12.36□□□□□ -0.43
SF3A3-204ENST00000462258 ADGRA2Q96PE1 1338 aa12.36□□□□□ -0.43
SF3A3-204ENST00000462258 CENPFP49454 3210 aa12.35□□□□□ -0.43
SF3A3-204ENST00000462258 TRIM75PA6NK02 468 aa12.35□□□□□ -0.43
SF3A3-204ENST00000462258 PDHXO00330 501 aa12.35□□□□□ -0.43
SF3A3-204ENST00000462258 SMARCA5O60264 1052 aaPredicted RBP12.35□□□□□ -0.43
SF3A3-204ENST00000462258 PDE6AP16499 860 aa12.35□□□□□ -0.43
SF3A3-204ENST00000462258 USP5P45974 858 aa12.35□□□□□ -0.43
SF3A3-204ENST00000462258 SOX10P56693 466 aa12.35□□□□□ -0.43
SF3A3-204ENST00000462258 CAP1Q01518 475 aa12.35□□□□□ -0.43
SF3A3-204ENST00000462258 SLC4A8Q2Y0W8 1093 aa12.35□□□□□ -0.43
SF3A3-204ENST00000462258 CRACR2BQ8N4Y2 399 aaPredicted RBP12.35□□□□□ -0.43
SF3A3-204ENST00000462258 PARK7Q99497 189 aaKnown RBP12.35□□□□□ -0.43
SF3A3-204ENST00000462258 DNAJC18Q9H819 358 aa12.35□□□□□ -0.43
SF3A3-204ENST00000462258 SAP30BPQ9UHR5 308 aaKnown RBP12.35□□□□□ -0.43
SF3A3-204ENST00000462258 AFG3L2Q9Y4W6 797 aa12.35□□□□□ -0.43
SF3A3-204ENST00000462258 BAZ2AQ9UIF9 1905 aaKnown RBP12.35□□□□□ -0.43
SF3A3-204ENST00000462258 ATP5JP18859 108 aa12.34□□□□□ -0.43
SF3A3-204ENST00000462258 CAP2P40123 477 aa12.34□□□□□ -0.43
SF3A3-204ENST00000462258 RRP1BQ14684 758 aaKnown RBP12.34□□□□□ -0.43
SF3A3-204ENST00000462258 SLC9C2Q5TAH2 1124 aa12.34□□□□□ -0.43
SF3A3-204ENST00000462258 GPAT2Q6NUI2 795 aa12.34□□□□□ -0.43
SF3A3-204ENST00000462258 GADL1Q6ZQY3 521 aa12.34□□□□□ -0.43
SF3A3-204ENST00000462258 FASTKD5Q7L8L6 764 aaKnown RBP12.34□□□□□ -0.43
SF3A3-204ENST00000462258 EDC3Q96F86 508 aaKnown RBP12.34□□□□□ -0.43
SF3A3-204ENST00000462258 RIOK1Q9BRS2 568 aaKnown RBP12.34□□□□□ -0.43
SF3A3-204ENST00000462258 BOLA2Q9H3K6 86 aa12.34□□□□□ -0.43
SF3A3-204ENST00000462258 PAG1Q9NWQ8 432 aa12.34□□□□□ -0.43
SF3A3-204ENST00000462258 PALD1Q9ULE6 856 aa12.34□□□□□ -0.43
SF3A3-204ENST00000462258 ZNF532Q9HCE3 1301 aa12.34□□□□□ -0.43
SF3A3-204ENST00000462258 MAGEB6P1A0A0J9YX57 407 aa12.33□□□□□ -0.44
SF3A3-204ENST00000462258 LACTBP83111 547 aaPredicted RBP12.33□□□□□ -0.44
SF3A3-204ENST00000462258 METTL16Q86W50 562 aaKnown RBP12.33□□□□□ -0.44
SF3A3-204ENST00000462258 TBC1D2Q9BYX2 928 aa12.33□□□□□ -0.44
SF3A3-204ENST00000462258 CPA4Q9UI42 421 aa12.33□□□□□ -0.44
SF3A3-204ENST00000462258 PTPN22Q9Y2R2 807 aa12.33□□□□□ -0.44
SF3A3-204ENST00000462258 BRCA2P51587 3418 aa12.32□□□□□ -0.44
SF3A3-204ENST00000462258 TCRBV5S4A2TA0A5A2 114 aa12.32□□□□□ -0.44
SF3A3-204ENST00000462258 GDF11O95390 407 aa12.32□□□□□ -0.44
SF3A3-204ENST00000462258 ASNSP08243 561 aa12.32□□□□□ -0.44
SF3A3-204ENST00000462258 CYP2C8P10632 490 aa12.32□□□□□ -0.44
SF3A3-204ENST00000462258 RGS19P49795 217 aa12.32□□□□□ -0.44
SF3A3-204ENST00000462258 KIF22Q14807 665 aa12.32□□□□□ -0.44
SF3A3-204ENST00000462258 ARHGEF6Q15052 776 aa12.32□□□□□ -0.44
SF3A3-204ENST00000462258 C17orf99Q6UX52 265 aa12.32□□□□□ -0.44
SF3A3-204ENST00000462258 ZNF280CQ8ND82 737 aa12.32□□□□□ -0.44
SF3A3-204ENST00000462258 GPATCH3Q96I76 525 aa12.32□□□□□ -0.44
SF3A3-204ENST00000462258 HAUS7Q99871 368 aa12.32□□□□□ -0.44
SF3A3-204ENST00000462258 CRNKL1Q9BZJ0 848 aaKnown RBP12.32□□□□□ -0.44
SF3A3-204ENST00000462258 ARHGAP39Q9C0H5 1083 aa12.32□□□□□ -0.44
SF3A3-204ENST00000462258 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.32□□□□□ -0.443e-7■□□□□ 10.7
SF3A3-204ENST00000462258 DCTPP1Q9H773 170 aa12.32□□□□□ -0.44
SF3A3-204ENST00000462258 AS3MTQ9HBK9 375 aa12.32□□□□□ -0.44
SF3A3-204ENST00000462258 AGTPBP1Q9UPW5 1226 aa12.32□□□□□ -0.44
SF3A3-204ENST00000462258 SLC45A1Q9Y2W3 748 aa12.32□□□□□ -0.44
SF3A3-204ENST00000462258 USP17L5A8MUK1 530 aa12.31□□□□□ -0.44
SF3A3-204ENST00000462258 ADD2P35612 726 aa12.31□□□□□ -0.44
SF3A3-204ENST00000462258 MLLT1Q03111 559 aaPredicted RBP12.31□□□□□ -0.44
SF3A3-204ENST00000462258 SPP2Q13103 211 aa12.31□□□□□ -0.44
SF3A3-204ENST00000462258 SHROOM1Q2M3G4 852 aaPredicted RBP12.31□□□□□ -0.44
SF3A3-204ENST00000462258 TREML2Q5T2D2 321 aa12.31□□□□□ -0.44
SF3A3-204ENST00000462258 FOXP4Q8IVH2 680 aaPredicted RBP12.31□□□□□ -0.44
SF3A3-204ENST00000462258 LCORLQ8N3X6 602 aa12.31□□□□□ -0.44
SF3A3-204ENST00000462258 PROCA1Q8NCQ7 364 aaPredicted RBP12.31□□□□□ -0.44
SF3A3-204ENST00000462258 SMCR8Q8TEV9 937 aaPredicted RBP12.31□□□□□ -0.44
SF3A3-204ENST00000462258 CRBNQ96SW2 442 aa12.31□□□□□ -0.44
SF3A3-204ENST00000462258 EHD4Q9H223 541 aa12.31□□□□□ -0.44
SF3A3-204ENST00000462258 ECHDC1Q9NTX5 307 aa12.31□□□□□ -0.44
SF3A3-204ENST00000462258 ZBTB21Q9ULJ3 1066 aa12.31□□□□□ -0.44
SF3A3-204ENST00000462258 PCDHB15Q9Y5E8 787 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms