RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 CCDC129Q6ZRS4 1044 aa10.8□□□□□ -0.68
DDX39B-215ENST00000462256 MICU3Q86XE3 530 aa10.8□□□□□ -0.68
DDX39B-215ENST00000462256 NCAPG2Q86XI2 1143 aa10.8□□□□□ -0.68
DDX39B-215ENST00000462256 SH3RF3Q8TEJ3 882 aaPredicted RBP10.8□□□□□ -0.68
DDX39B-215ENST00000462256 CDCA5Q96FF9 252 aa10.8□□□□□ -0.68
DDX39B-215ENST00000462256 RTL9Q8NET4 1388 aa10.8□□□□□ -0.68
DDX39B-215ENST00000462256 GH2P01242 217 aa10.8□□□□□ -0.68
DDX39B-215ENST00000462256 CETPP11597 493 aa10.8□□□□□ -0.68
DDX39B-215ENST00000462256 KIFC2Q96AC6 838 aa10.8□□□□□ -0.68
DDX39B-215ENST00000462256 SMC3Q9UQE7 1217 aa10.8□□□□□ -0.68
DDX39B-215ENST00000462256 FSTL1Q12841 308 aa10.8□□□□□ -0.68
DDX39B-215ENST00000462256 BMP2KLQ5H9B9 411 aa10.8□□□□□ -0.68
DDX39B-215ENST00000462256 PLEKHM2Q8IWE5 1019 aa10.8□□□□□ -0.68
DDX39B-215ENST00000462256 CCDC12Q8WUD4 166 aaPredicted RBP10.8□□□□□ -0.68
DDX39B-215ENST00000462256 KCNQ5Q9NR82 932 aa10.8□□□□□ -0.68
DDX39B-215ENST00000462256 FAM196BA6NMK8 535 aa10.79□□□□□ -0.68
DDX39B-215ENST00000462256 CASTP20810 708 aaKnown RBP10.79□□□□□ -0.68
DDX39B-215ENST00000462256 KCTD2Q14681 263 aa10.79□□□□□ -0.68
DDX39B-215ENST00000462256 CDC42EP5Q6NZY7 148 aa10.79□□□□□ -0.68
DDX39B-215ENST00000462256 RBM46Q8TBY0 533 aaKnown RBP10.79□□□□□ -0.68
DDX39B-215ENST00000462256 GPHNQ9NQX3 736 aaPredicted RBP10.79□□□□□ -0.68
DDX39B-215ENST00000462256 PDRG1Q9NUG6 133 aa10.79□□□□□ -0.68
DDX39B-215ENST00000462256 MAP2K1Q02750 393 aaPredicted RBP10.79□□□□□ -0.68
DDX39B-215ENST00000462256 NFKBIBQ15653 356 aa10.79□□□□□ -0.68
DDX39B-215ENST00000462256 IFNL3Q8IZI9 196 aa10.79□□□□□ -0.68
DDX39B-215ENST00000462256 NEK1Q96PY6 1258 aa10.79□□□□□ -0.68
DDX39B-215ENST00000462256 RBM8AQ9Y5S9 174 aaKnown RBP10.79□□□□□ -0.68
DDX39B-215ENST00000462256 RAD50Q92878 1312 aa10.79□□□□□ -0.68
DDX39B-215ENST00000462256 LRRC37A3O60309 1634 aa10.79□□□□□ -0.68
DDX39B-215ENST00000462256 TRPA1O75762 1119 aa10.79□□□□□ -0.68
DDX39B-215ENST00000462256 CYP2E1P05181 493 aaPredicted RBP10.79□□□□□ -0.68
DDX39B-215ENST00000462256 PARP1P09874 1014 aaKnown RBP10.79□□□□□ -0.68
DDX39B-215ENST00000462256 IL1R1P14778 569 aa10.79□□□□□ -0.68
DDX39B-215ENST00000462256 ADD2P35612 726 aa10.79□□□□□ -0.68
DDX39B-215ENST00000462256 PPARAQ07869 468 aa10.79□□□□□ -0.68
DDX39B-215ENST00000462256 TRPM4Q8TD43 1214 aa10.79□□□□□ -0.68
DDX39B-215ENST00000462256 WASF1Q92558 559 aa10.79□□□□□ -0.68
DDX39B-215ENST00000462256 C22orf23Q9BZE7 217 aa10.79□□□□□ -0.68
DDX39B-215ENST00000462256 HOMER2Q9NSB8 354 aa10.79□□□□□ -0.68
DDX39B-215ENST00000462256 AOX1Q06278 1338 aa10.78□□□□□ -0.68
DDX39B-215ENST00000462256 USP17L10C9JJH3 530 aa10.78□□□□□ -0.68
DDX39B-215ENST00000462256 RGMBQ6NW40 437 aa10.78□□□□□ -0.68
DDX39B-215ENST00000462256 SPICE1Q8N0Z3 855 aa10.78□□□□□ -0.68
DDX39B-215ENST00000462256 RAET1EQ8TD07 263 aa10.78□□□□□ -0.68
DDX39B-215ENST00000462256 GTF2A2P52657 109 aa10.78□□□□□ -0.68
DDX39B-215ENST00000462256 TMEM132AQ24JP5 1023 aa10.78□□□□□ -0.68
DDX39B-215ENST00000462256 ERO1BQ86YB8 467 aa10.78□□□□□ -0.68
DDX39B-215ENST00000462256 MANSC4A6NHS7 340 aaPredicted RBP10.78□□□□□ -0.68
DDX39B-215ENST00000462256 TNPO2O14787 897 aaKnown RBP10.78□□□□□ -0.68
DDX39B-215ENST00000462256 FAM47AQ5JRC9 791 aa10.78□□□□□ -0.68
DDX39B-215ENST00000462256 NBPF12Q5TAG4 269 aaPredicted RBP10.78□□□□□ -0.68
DDX39B-215ENST00000462256 ANKRD35Q8N283 1001 aa10.78□□□□□ -0.68
DDX39B-215ENST00000462256 SMARCC2Q8TAQ2 1214 aa10.78□□□□□ -0.68
DDX39B-215ENST00000462256 PARK7Q99497 189 aaKnown RBP10.78□□□□□ -0.68
DDX39B-215ENST00000462256 FOXD4L1Q9NU39 408 aa10.78□□□□□ -0.68
DDX39B-215ENST00000462256 FAM205AQ6ZU69 1335 aa10.78□□□□□ -0.68
DDX39B-215ENST00000462256 CASP7P55210 303 aa10.77□□□□□ -0.68
DDX39B-215ENST00000462256 TMEM179Q6ZVK1 233 aa10.77□□□□□ -0.68
DDX39B-215ENST00000462256 CCDC144CPQ8IYA2 1237 aa10.77□□□□□ -0.68
DDX39B-215ENST00000462256 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.77□□□□□ -0.68
DDX39B-215ENST00000462256 FAM227BQ96M60 508 aa10.77□□□□□ -0.68
DDX39B-215ENST00000462256 ZDHHC15Q96MV8 337 aa10.77□□□□□ -0.68
DDX39B-215ENST00000462256 ZKSCAN3Q9BRR0 538 aa10.77□□□□□ -0.68
DDX39B-215ENST00000462256 KLRG2A4D1S0 409 aaPredicted RBP10.77□□□□□ -0.69
DDX39B-215ENST00000462256 FZD9O00144 591 aa10.77□□□□□ -0.69
DDX39B-215ENST00000462256 TRAF5O00463 557 aa10.77□□□□□ -0.69
DDX39B-215ENST00000462256 IBSPP21815 317 aaPredicted RBP10.77□□□□□ -0.69
DDX39B-215ENST00000462256 ARID4AP29374 1257 aaPredicted RBP10.77□□□□□ -0.69
DDX39B-215ENST00000462256 FKBP1BP68106 108 aa10.77□□□□□ -0.69
DDX39B-215ENST00000462256 SLFN13Q68D06 897 aa10.77□□□□□ -0.69
DDX39B-215ENST00000462256 LCORLQ8N3X6 602 aa10.77□□□□□ -0.69
DDX39B-215ENST00000462256 CAPNS2Q96L46 248 aa10.77□□□□□ -0.69
DDX39B-215ENST00000462256 PNMA2Q9UL42 364 aa10.77□□□□□ -0.69
DDX39B-215ENST00000462256 NOD1Q9Y239 953 aa10.77□□□□□ -0.69
DDX39B-215ENST00000462256 B4E1Z4 1266 aa10.77□□□□□ -0.69
DDX39B-215ENST00000462256 CALM1P0DP23 149 aa10.77□□□□□ -0.69
DDX39B-215ENST00000462256 CALM2P0DP24 149 aa10.77□□□□□ -0.69
DDX39B-215ENST00000462256 CALM3P0DP25 149 aa10.77□□□□□ -0.69
DDX39B-215ENST00000462256 PDE4AP27815 886 aa10.77□□□□□ -0.69
DDX39B-215ENST00000462256 CTDSPL2Q05D32 466 aa10.77□□□□□ -0.69
DDX39B-215ENST00000462256 NSUN4Q96CB9 384 aaKnown RBP10.77□□□□□ -0.69
DDX39B-215ENST00000462256 RGPD5Q99666 1765 aa10.76□□□□□ -0.69
DDX39B-215ENST00000462256 PTPDC1A2A3K4 754 aa10.76□□□□□ -0.69
DDX39B-215ENST00000462256 UPF3BQ9BZI7 483 aaKnown RBP10.76□□□□□ -0.69
DDX39B-215ENST00000462256 CICQ96RK0 1608 aaPredicted RBP10.76□□□□□ -0.69
DDX39B-215ENST00000462256 C10orf71Q711Q0 1435 aa10.76□□□□□ -0.69
DDX39B-215ENST00000462256 VPS37CA5D8V6 355 aaPredicted RBP10.76□□□□□ -0.69
DDX39B-215ENST00000462256 ZBTB43O43298 467 aa10.76□□□□□ -0.69
DDX39B-215ENST00000462256 RFX5P48382 616 aaPredicted RBP10.76□□□□□ -0.69
DDX39B-215ENST00000462256 AKNAD1Q5T1N1 836 aa10.76□□□□□ -0.69
DDX39B-215ENST00000462256 CNPY4Q8N129 248 aa10.76□□□□□ -0.69
DDX39B-215ENST00000462256 SCLT1Q96NL6 688 aa10.76□□□□□ -0.69
DDX39B-215ENST00000462256 RTFDC1Q9BY42 306 aaPredicted RBP10.76□□□□□ -0.69
DDX39B-215ENST00000462256 PRC1O43663 620 aa10.76□□□□□ -0.69
DDX39B-215ENST00000462256 LRP10Q7Z4F1 713 aa10.76□□□□□ -0.69
DDX39B-215ENST00000462256 RRP36Q96EU6 259 aaKnown RBP10.76□□□□□ -0.69
DDX39B-215ENST00000462256 OSBPL5Q9H0X9 879 aaPredicted RBP10.76□□□□□ -0.69
DDX39B-215ENST00000462256 PRKAB2O43741 272 aa10.75□□□□□ -0.69
DDX39B-215ENST00000462256 CAPN15O75808 1086 aa10.75□□□□□ -0.69
DDX39B-215ENST00000462256 ALAS1P13196 640 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms