RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 PICALMQ13492 652 aa13.48□□□□□ -0.25
CBX3-205ENST00000462165 RASGRF1Q13972 1273 aa13.48□□□□□ -0.25
CBX3-205ENST00000462165 ALDH1L2Q3SY69 923 aa13.48□□□□□ -0.25
CBX3-205ENST00000462165 TREML2Q5T2D2 321 aa13.48□□□□□ -0.25
CBX3-205ENST00000462165 CCDC84Q86UT8 332 aaPredicted RBP13.48□□□□□ -0.25
CBX3-205ENST00000462165 ANKLE1Q8NAG6 615 aa13.48□□□□□ -0.25
CBX3-205ENST00000462165 LRCH3Q96II8 777 aa13.48□□□□□ -0.25
CBX3-205ENST00000462165 GDF15Q99988 308 aa13.48□□□□□ -0.25
CBX3-205ENST00000462165 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.48□□□□□ -0.25
CBX3-205ENST00000462165 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.48□□□□□ -0.25
CBX3-205ENST00000462165 ABCF2Q9UG63 623 aa13.48□□□□□ -0.25
CBX3-205ENST00000462165 TAOK2Q9UL54 1235 aa13.48□□□□□ -0.25
CBX3-205ENST00000462165 DDX60LQ5H9U9 1706 aaKnown RBP13.47□□□□□ -0.25
CBX3-205ENST00000462165 UNC80Q8N2C7 3258 aa13.47□□□□□ -0.25
CBX3-205ENST00000462165 BMP8BP34820 402 aa13.47□□□□□ -0.25
CBX3-205ENST00000462165 GCLCP48506 637 aaPredicted RBP13.47□□□□□ -0.25
CBX3-205ENST00000462165 RHBDL3P58872 404 aa13.47□□□□□ -0.25
CBX3-205ENST00000462165 SPTY2D1Q68D10 685 aaPredicted RBP13.47□□□□□ -0.25
CBX3-205ENST00000462165 DIS3LQ8TF46 1054 aaKnown RBP13.47□□□□□ -0.25
CBX3-205ENST00000462165 TBC1D2Q9BYX2 928 aa13.47□□□□□ -0.25
CBX3-205ENST00000462165 OSBPL5Q9H0X9 879 aaPredicted RBP13.47□□□□□ -0.25
CBX3-205ENST00000462165 COPRSQ9NQ92 184 aa13.47□□□□□ -0.25
CBX3-205ENST00000462165 PA2G4Q9UQ80 394 aaKnown RBP13.47□□□□□ -0.25
CBX3-205ENST00000462165 COL2A1P02458 1487 aaPredicted RBP13.47□□□□□ -0.25
CBX3-205ENST00000462165 GPR75-ASB3A0A0A6YYF3 556 aa13.46□□□□□ -0.25
CBX3-205ENST00000462165 HMGCRP04035 888 aa13.46□□□□□ -0.25
CBX3-205ENST00000462165 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.46□□□□□ -0.25
CBX3-205ENST00000462165 HDAC5Q9UQL6 1122 aa13.46□□□□□ -0.25
CBX3-205ENST00000462165 RPTORQ8N122 1335 aa13.45□□□□□ -0.26
CBX3-205ENST00000462165 MAP4K4O95819 1239 aaPredicted RBP13.45□□□□□ -0.26
CBX3-205ENST00000462165 TIMM10P62072 90 aa13.45□□□□□ -0.26
CBX3-205ENST00000462165 MECOMQ03112 1051 aa13.45□□□□□ -0.26
CBX3-205ENST00000462165 SLFN5Q08AF3 891 aa13.45□□□□□ -0.26
CBX3-205ENST00000462165 SPP2Q13103 211 aa13.45□□□□□ -0.26
CBX3-205ENST00000462165 PABPC4Q13310 644 aaKnown RBP eCLIP13.45□□□□□ -0.26
CBX3-205ENST00000462165 GPR153Q6NV75 609 aa13.45□□□□□ -0.26
CBX3-205ENST00000462165 ERICH6Q7L0X2 663 aa13.45□□□□□ -0.26
CBX3-205ENST00000462165 ZNF280CQ8ND82 737 aa13.45□□□□□ -0.26
CBX3-205ENST00000462165 ZNF384Q8TF68 577 aa13.45□□□□□ -0.26
CBX3-205ENST00000462165 HMX1Q9NP08 348 aaPredicted RBP13.45□□□□□ -0.26
CBX3-205ENST00000462165 SMC4Q9NTJ3 1288 aa13.45□□□□□ -0.26
CBX3-205ENST00000462165 GJD2Q9UKL4 321 aa13.45□□□□□ -0.26
CBX3-205ENST00000462165 SIPA1L1O43166 1804 aa13.44□□□□□ -0.26
CBX3-205ENST00000462165 A0A1B0GUL7 405 aa13.44□□□□□ -0.26
CBX3-205ENST00000462165 FAM196BA6NMK8 535 aa13.44□□□□□ -0.26
CBX3-205ENST00000462165 MNX1P50219 401 aaPredicted RBP13.44□□□□□ -0.26
CBX3-205ENST00000462165 SH3D19Q5HYK7 790 aa13.44□□□□□ -0.26
CBX3-205ENST00000462165 C7orf61Q8IZ16 206 aa13.44□□□□□ -0.26
CBX3-205ENST00000462165 XAGE2Q96GT9 111 aa13.44□□□□□ -0.26
CBX3-205ENST00000462165 NBPF3Q9H094 633 aa13.44□□□□□ -0.26
CBX3-205ENST00000462165 ASCC2Q9H1I8 757 aaPredicted RBP13.44□□□□□ -0.26
CBX3-205ENST00000462165 LDHCP07864 332 aa13.43□□□□□ -0.26
CBX3-205ENST00000462165 CAP2P40123 477 aa13.43□□□□□ -0.26
CBX3-205ENST00000462165 HMGCS2P54868 508 aa13.43□□□□□ -0.26
CBX3-205ENST00000462165 MVPQ14764 893 aaKnown RBP13.43□□□□□ -0.26
CBX3-205ENST00000462165 NSUN4Q96CB9 384 aaKnown RBP13.43□□□□□ -0.26
CBX3-205ENST00000462165 CDK5RAP2Q96SN8 1893 aa13.43□□□□□ -0.26
CBX3-205ENST00000462165 MORF4L1Q9UBU8 362 aa13.43□□□□□ -0.26
CBX3-205ENST00000462165 OGDHLQ9ULD0 1010 aa13.43□□□□□ -0.26
CBX3-205ENST00000462165 ZMYND8Q9ULU4 1186 aaPredicted RBP13.43□□□□□ -0.26
CBX3-205ENST00000462165 AKAP2Q9Y2D5 859 aa13.43□□□□□ -0.26
CBX3-205ENST00000462165 FOCADQ5VW36 1801 aa13.42□□□□□ -0.26
CBX3-205ENST00000462165 USP17L5A8MUK1 530 aa13.42□□□□□ -0.26
CBX3-205ENST00000462165 GSTO1P78417 241 aa13.42□□□□□ -0.26
CBX3-205ENST00000462165 TRIM32Q13049 653 aa13.42□□□□□ -0.26
CBX3-205ENST00000462165 RRP1BQ14684 758 aaKnown RBP13.42□□□□□ -0.26
CBX3-205ENST00000462165 LRIT3Q3SXY7 679 aa13.42□□□□□ -0.26
CBX3-205ENST00000462165 AS3MTQ9HBK9 375 aa13.42□□□□□ -0.26
CBX3-205ENST00000462165 HERC5Q9UII4 1024 aaKnown RBP13.42□□□□□ -0.26
CBX3-205ENST00000462165 TFCP2Q12800 502 aa13.41□□□□□ -0.26
CBX3-205ENST00000462165 MAP3K21Q5TCX8 1036 aa13.41□□□□□ -0.26
CBX3-205ENST00000462165 TRIB2Q92519 343 aa13.41□□□□□ -0.26
CBX3-205ENST00000462165 MEIS3Q99687 375 aa13.41□□□□□ -0.26
CBX3-205ENST00000462165 WDR18Q9BV38 432 aa13.41□□□□□ -0.26
CBX3-205ENST00000462165 API5Q9BZZ5 524 aaKnown RBP13.41□□□□□ -0.26
CBX3-205ENST00000462165 C11orf49Q9H6J7 331 aa13.41□□□□□ -0.26
CBX3-205ENST00000462165 HMG20BQ9P0W2 317 aa13.41□□□□□ -0.26
CBX3-205ENST00000462165 NOB1Q9ULX3 412 aaKnown RBP13.41□□□□□ -0.26
CBX3-205ENST00000462165 HOXA7P31268 230 aaPredicted RBP13.4□□□□□ -0.26
CBX3-205ENST00000462165 MAGEA10P43363 369 aaPredicted RBP13.4□□□□□ -0.26
CBX3-205ENST00000462165 TRMT2AQ8IZ69 625 aaKnown RBP13.4□□□□□ -0.26
CBX3-205ENST00000462165 TDHQ8IZJ6 230 aa13.4□□□□□ -0.26
CBX3-205ENST00000462165 DEFB123Q8N688 67 aa13.4□□□□□ -0.26
CBX3-205ENST00000462165 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.4□□□□□ -0.26
CBX3-205ENST00000462165 FRMPD3Q5JV73 1810 aa13.4□□□□□ -0.26
CBX3-205ENST00000462165 MAST2Q6P0Q8 1798 aa13.4□□□□□ -0.26
CBX3-205ENST00000462165 PFASO15067 1338 aa13.39□□□□□ -0.27
CBX3-205ENST00000462165 EYSQ5T1H1 3165 aa13.39□□□□□ -0.27
CBX3-205ENST00000462165 SRGAP3O43295 1099 aa13.39□□□□□ -0.27
CBX3-205ENST00000462165 CT47B1P0C2W7 299 aaPredicted RBP13.39□□□□□ -0.27
CBX3-205ENST00000462165 XRCC5P13010 732 aaKnown RBP13.39□□□□□ -0.27
CBX3-205ENST00000462165 SYN1P17600 705 aa13.39□□□□□ -0.27
CBX3-205ENST00000462165 CYP2B6P20813 491 aa13.39□□□□□ -0.27
CBX3-205ENST00000462165 ARID4AP29374 1257 aaPredicted RBP13.39□□□□□ -0.27
CBX3-205ENST00000462165 BACE1P56817 501 aa13.39□□□□□ -0.27
CBX3-205ENST00000462165 IRX3P78415 501 aaPredicted RBP13.39□□□□□ -0.27
CBX3-205ENST00000462165 MTX1Q13505 466 aa13.39□□□□□ -0.27
CBX3-205ENST00000462165 PI16Q6UXB8 463 aa13.39□□□□□ -0.27
CBX3-205ENST00000462165 TBC1D9Q6ZT07 1266 aa13.39□□□□□ -0.27
CBX3-205ENST00000462165 TEX11Q8IYF3 940 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms