RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 SMAP1Q8IYB5 467 aaPredicted RBP14.45□□□□□ -0.1
COL4A6-204ENST00000461897 RGS22Q8NE09 1264 aa14.45□□□□□ -0.1
COL4A6-204ENST00000461897 ENGASEQ8NFI3 743 aa14.45□□□□□ -0.1
COL4A6-204ENST00000461897 MRFAP1L1Q96HT8 127 aa14.45□□□□□ -0.1
COL4A6-204ENST00000461897 PTPDC1A2A3K4 754 aa14.44□□□□□ -0.1
COL4A6-204ENST00000461897 LDHBP07195 334 aaKnown RBP14.44□□□□□ -0.1
COL4A6-204ENST00000461897 CYB5R4Q7L1T6 521 aa14.44□□□□□ -0.1
COL4A6-204ENST00000461897 ANKRD7Q92527 254 aa14.44□□□□□ -0.1
COL4A6-204ENST00000461897 ZNF396Q96N95 335 aaPredicted RBP14.44□□□□□ -0.1
COL4A6-204ENST00000461897 TRIM5Q9C035 493 aa14.44□□□□□ -0.1
COL4A6-204ENST00000461897 DNAJC25Q9H1X3 360 aa14.44□□□□□ -0.1
COL4A6-204ENST00000461897 INCENPQ9NQS7 918 aa14.44□□□□□ -0.1
COL4A6-204ENST00000461897 AATFQ9NY61 560 aaKnown RBP eCLIP14.44□□□□□ -0.1
COL4A6-204ENST00000461897 LAMB1P07942 1786 aa14.44□□□□□ -0.1
COL4A6-204ENST00000461897 B4E1Z4 1266 aa14.44□□□□□ -0.1
COL4A6-204ENST00000461897 RIOK3O14730 519 aaKnown RBP14.44□□□□□ -0.1
COL4A6-204ENST00000461897 NEMFO60524 1076 aa14.44□□□□□ -0.1
COL4A6-204ENST00000461897 TRDNQ13061 729 aa14.44□□□□□ -0.1
COL4A6-204ENST00000461897 SNW1Q13573 536 aaKnown RBP14.44□□□□□ -0.1
COL4A6-204ENST00000461897 STX1AQ16623 288 aa14.44□□□□□ -0.1
COL4A6-204ENST00000461897 ZNF622Q969S3 477 aaKnown RBP eCLIP14.44□□□□□ -0.1
COL4A6-204ENST00000461897 MYH2Q9UKX2 1941 aa14.44□□□□□ -0.1
COL4A6-204ENST00000461897 IGSF3O75054 1194 aa14.43□□□□□ -0.1
COL4A6-204ENST00000461897 PDIA3P30101 505 aaKnown RBP14.43□□□□□ -0.1
COL4A6-204ENST00000461897 AKNAD1Q5T1N1 836 aa14.43□□□□□ -0.1
COL4A6-204ENST00000461897 STYK1Q6J9G0 422 aa14.43□□□□□ -0.1
COL4A6-204ENST00000461897 STAG1Q8WVM7 1258 aa14.43□□□□□ -0.1
COL4A6-204ENST00000461897 DDX11Q96FC9 970 aa14.43□□□□□ -0.1
COL4A6-204ENST00000461897 H0YIN7 160 aa14.42□□□□□ -0.1
COL4A6-204ENST00000461897 SMIM22K7EJ46 135 aa14.42□□□□□ -0.1
COL4A6-204ENST00000461897 CHRNA5P30532 468 aa14.42□□□□□ -0.1
COL4A6-204ENST00000461897 PPARAQ07869 468 aa14.42□□□□□ -0.1
COL4A6-204ENST00000461897 DPP8Q6V1X1 898 aaPredicted RBP14.42□□□□□ -0.1
COL4A6-204ENST00000461897 CCAR1Q8IX12 1150 aaKnown RBP14.42□□□□□ -0.1
COL4A6-204ENST00000461897 C10orf71Q711Q0 1435 aa14.42□□□□□ -0.1
COL4A6-204ENST00000461897 DLEC1Q9Y238 1755 aa14.42□□□□□ -0.1
COL4A6-204ENST00000461897 RIMBP2O15034 1052 aa14.42□□□□□ -0.1
COL4A6-204ENST00000461897 FAM160A1Q05DH4 1040 aa14.42□□□□□ -0.1
COL4A6-204ENST00000461897 DIXDC1Q155Q3 683 aa14.42□□□□□ -0.1
COL4A6-204ENST00000461897 USP28Q96RU2 1077 aa14.42□□□□□ -0.1
COL4A6-204ENST00000461897 GOLPH3LQ9H4A5 285 aa14.42□□□□□ -0.1
COL4A6-204ENST00000461897 ANAPC4Q9UJX5 808 aa14.42□□□□□ -0.1
COL4A6-204ENST00000461897 A0A1W2PQ27 194 aa14.41□□□□□ -0.1
COL4A6-204ENST00000461897 A0A1W2PQ64 194 aa14.41□□□□□ -0.1
COL4A6-204ENST00000461897 A0A1W2PQD8 194 aa14.41□□□□□ -0.1
COL4A6-204ENST00000461897 SMTNL1A8MU46 457 aa14.41□□□□□ -0.1
COL4A6-204ENST00000461897 SH2B2O14492 632 aaPredicted RBP14.41□□□□□ -0.1
COL4A6-204ENST00000461897 CCDC73Q6ZRK6 1079 aa14.41□□□□□ -0.1
COL4A6-204ENST00000461897 MFSD6Q6ZSS7 791 aa14.41□□□□□ -0.1
COL4A6-204ENST00000461897 ILDR1Q86SU0 546 aaPredicted RBP14.41□□□□□ -0.1
COL4A6-204ENST00000461897 COA1Q9GZY4 146 aa14.41□□□□□ -0.1
COL4A6-204ENST00000461897 CNNM2Q9H8M5 875 aa14.41□□□□□ -0.1
COL4A6-204ENST00000461897 NCOA5Q9HCD5 579 aaKnown RBP14.41□□□□□ -0.1
COL4A6-204ENST00000461897 KCND1Q9NSA2 647 aa14.41□□□□□ -0.1
COL4A6-204ENST00000461897 RTEL1Q9NZ71 1219 aa14.41□□□□□ -0.1
COL4A6-204ENST00000461897 CLIP2Q9UDT6 1046 aa14.41□□□□□ -0.1
COL4A6-204ENST00000461897 NRBP1Q9UHY1 535 aa14.41□□□□□ -0.1
COL4A6-204ENST00000461897 FAM205AQ6ZU69 1335 aa14.41□□□□□ -0.1
COL4A6-204ENST00000461897 CDK5RAP2Q96SN8 1893 aa14.4□□□□□ -0.1
COL4A6-204ENST00000461897 CYP2D7A0A087X1C5 515 aa14.4□□□□□ -0.1
COL4A6-204ENST00000461897 KLF18A0A0U1RQI7 1052 aa14.4□□□□□ -0.1
COL4A6-204ENST00000461897 CCT2P78371 535 aaKnown RBP14.4□□□□□ -0.1
COL4A6-204ENST00000461897 LRMPQ12912 555 aa14.4□□□□□ -0.1
COL4A6-204ENST00000461897 MFSD14BQ5SR56 506 aa14.4□□□□□ -0.1
COL4A6-204ENST00000461897 C11orf57Q6ZUT1 292 aaPredicted RBP14.4□□□□□ -0.1
COL4A6-204ENST00000461897 CACTINQ8WUQ7 758 aaKnown RBP14.4□□□□□ -0.1
COL4A6-204ENST00000461897 TSC1Q92574 1164 aa14.4□□□□□ -0.1
COL4A6-204ENST00000461897 CRNKL1Q9BZJ0 848 aaKnown RBP14.4□□□□□ -0.1
COL4A6-204ENST00000461897 DCP1AQ9NPI6 582 aaPredicted RBP14.4□□□□□ -0.1
COL4A6-204ENST00000461897 ANO10Q9NW15 660 aa14.4□□□□□ -0.1
COL4A6-204ENST00000461897 ANGEL1Q9UNK9 670 aaKnown RBP14.4□□□□□ -0.1
COL4A6-204ENST00000461897 HPS5Q9UPZ3 1129 aa14.4□□□□□ -0.1
COL4A6-204ENST00000461897 PAXBP1Q9Y5B6 917 aa14.4□□□□□ -0.1
COL4A6-204ENST00000461897 SNED1Q8TER0 1413 aa14.4□□□□□ -0.1
COL4A6-204ENST00000461897 MINDY4BA8MYZ0 360 aa14.4□□□□□ -0.1
COL4A6-204ENST00000461897 GOLGA6L19H0YKK7 550 aa14.4□□□□□ -0.1
COL4A6-204ENST00000461897 CTR9Q6PD62 1173 aa14.4□□□□□ -0.1
COL4A6-204ENST00000461897 DRC7Q8IY82 874 aa14.4□□□□□ -0.1
COL4A6-204ENST00000461897 IGDCC4Q8TDY8 1250 aa14.4□□□□□ -0.1
COL4A6-204ENST00000461897 TMEM87BQ96K49 555 aa14.4□□□□□ -0.1
COL4A6-204ENST00000461897 RTFDC1Q9BY42 306 aaPredicted RBP14.4□□□□□ -0.1
COL4A6-204ENST00000461897 KRT23Q9C075 422 aa14.4□□□□□ -0.1
COL4A6-204ENST00000461897 ZC3H12CQ9C0D7 883 aaKnown RBP14.4□□□□□ -0.1
COL4A6-204ENST00000461897 SENP2Q9HC62 589 aa14.4□□□□□ -0.1
COL4A6-204ENST00000461897 ZSWIM5Q9P217 1185 aa14.4□□□□□ -0.1
COL4A6-204ENST00000461897 NAP1L2Q9ULW6 460 aaPredicted RBP14.4□□□□□ -0.1
COL4A6-204ENST00000461897 MROH7-TTC4A0A0A0MT08 1334 aa14.4□□□□□ -0.1
COL4A6-204ENST00000461897 NAV1Q8NEY1 1877 aa14.39□□□□□ -0.11
COL4A6-204ENST00000461897 GOLGA8BA8MQT2 603 aa14.39□□□□□ -0.11
COL4A6-204ENST00000461897 KINO60870 393 aaKnown RBP14.39□□□□□ -0.11
COL4A6-204ENST00000461897 GTF2IP78347 998 aa14.39□□□□□ -0.11
COL4A6-204ENST00000461897 GSTO1P78417 241 aa14.39□□□□□ -0.11
COL4A6-204ENST00000461897 EVX2Q03828 476 aa14.39□□□□□ -0.11
COL4A6-204ENST00000461897 CCDC144BQ3MJ40 725 aa14.39□□□□□ -0.11
COL4A6-204ENST00000461897 ADALQ6DHV7 355 aa14.39□□□□□ -0.11
COL4A6-204ENST00000461897 DHX40Q8IX18 779 aaKnown RBP14.39□□□□□ -0.11
COL4A6-204ENST00000461897 CCDC144CPQ8IYA2 1237 aa14.39□□□□□ -0.11
COL4A6-204ENST00000461897 STK11IPQ8N1F8 1099 aa14.39□□□□□ -0.11
COL4A6-204ENST00000461897 TBC1D22AQ8WUA7 517 aa14.39□□□□□ -0.11
COL4A6-204ENST00000461897 RNF41Q9H4P4 317 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms